Slashdot Mirror
Domain: genomeweb.com
Stories and comments across the archive that link to genomeweb.com.
Stories · 7
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White House Plans Open Access For Research
Hugh Pickens writes "Currently, the National Institutes of Health require that research funded by its grants be made available to the public online at no charge within 12 months of publication. Now the Office of Science and Technology Policy in the Executive Office of the President is launching a 'Public Access Policy Forum' to determine whether this policy should be extended to other science agencies and, if so, how it should be implemented. 'The NIH model has a variety of features that can be evaluated, and there are other ways to offer the public enhanced access to peer-reviewed scholarly publications,' OSTP says in the request for information. 'The best models may [be] influenced by agency mission, the culture and rate of scientific development of the discipline, funding to develop archival capabilities, and research funding mechanisms.' The OSTP will conduct an interactive, online discussion that will focus on three major questions: Should this policy be extended to other science agencies and, if so, how it should be implemented? In what format should the data be submitted in order to make it easy to search and retrieve information? What are the best mechanisms to ensure compliance? 'It's very encouraging to see the Obama Administration focus on ensuring public access to the results of taxpayer-funded research [reg. required] as a key way to maximize our collective investment in science,' says Heather Joseph, executive director of the Scholarly Publishing and Academic Resources Coalition." -
DNA Differences Observed Between Blood and Organs
Scrameustache writes "Researcher working on a rare type of aortic abnormality found that the DNA from diseased tissue did not match the DNA from the blood of the same patients So far it's unclear whether these differences in the blood and aortic tissue are the consequence of RNA editing, which changes the messenger RNA but not the gene, or DNA editing, which involves differences in the gene itself. Based on the evidence so far, the researchers believe the differences resulted from developmental rather than somatic DNA alterations. 'Traditionally when we have looked for genetic risk factors for, say, heart disease, we have assumed that the blood will tell us what's happening in the tissue,' lead author Bruce Gottlieb said in a statement. 'It now seems this is simply not the case.'" -
Hadrosaur Proteins Sequenced
jd writes "In a follow-up study to the one on proteins found in a T. Rex bone, the team responsible for the T. Rex study sequenced proteins found in an 80-million year old Hadrosaur fossil. According to the article, the proteins found confirm the results of the T. Rex study, proving that what was found in T. Rex was not a result of modern contamination, as had been claimed by skeptics, but was indeed the genuine thing: real dinosaur protein. Furthermore, despite the new fossil being 12 million years older, they claim they got more out — eight collagen peptides and 149 amino acids from four different samples. This, they say, places the Hadrosaur in the same family as T. Rex and Ostriches, but that not enough was recovered to say just how close or distant the relationship was." -
Scientists Gearing Up to Publish Unrestricted Journals
Ender, Duke_of_URL writes: "Genomeweb reports that scientists are gearing up for the Sept 1 boycott of science publishers, because only two publishers (Genome Biology and PubMedCenteral) have met the demands of open and copyright free access to science articles. As part of this process they're developing a means to publish their own journal articles." If you missed the history of this showdown, slashdot has published a few previous stories. Great news for science if they succeed - awful news if they fail. -
Scientists Gearing Up to Publish Unrestricted Journals
Ender, Duke_of_URL writes: "Genomeweb reports that scientists are gearing up for the Sept 1 boycott of science publishers, because only two publishers (Genome Biology and PubMedCenteral) have met the demands of open and copyright free access to science articles. As part of this process they're developing a means to publish their own journal articles." If you missed the history of this showdown, slashdot has published a few previous stories. Great news for science if they succeed - awful news if they fail. -
Slashback: Plexion, Kernelism, Salaryness
The list grows of how many OSes Plex86 can boot. Soon you may have an easier time of installing a new kernel (besides turning to page 207 of Running Linux). SAGE wants to know the intimate, personal, steamy details of how much you earn as a SysAdmin. Also, not everyone trusts the proposed data-escrow deal involving Celera and Science. All below, in this episode of Slashback.Plex those muscles, yeah, and one and two and three ... dhunley expressed himself thusly: "A handful of days after getting Dos, Win95, and Linux to boot, Plex86 does it again! Initial support for booting QNX now works! Screenshot is here!" And shortly thereafter, the very same dhunley wrote: "Plex86 boots NT 4.0! Well, at least to the login dialog box. This is an old bochs disk image file. The mods will be uploaded to CVS soon."
Thanks, d. Watch out soon for an interview with bochs and plex86 lead Kevin Lawton, who promises to take time out from his busy schedule to tell you what's up in the worlds of emulation and virtualization.
While you're here, why not take a tour of the whinery? Apropros the wacky things that people have decided to put in the kernel lately (like GNOME ORBit), Booker writes: "Every time there's a major new kernel release, there's whining on Slashdot about killing uptime, and how much it sucks to have to reboot to get a new kernel. Well, whine no more.
Erik Hendriks at scyld.com brings us Two Kernel Monte, a 'kernel module which allows Linux to load another kernel image into RAM and restart the machine from that kernel.' The only major limitation appears to be that it will not work with SMP machines. Apparently Erik got the idea from the Linux Bios Project."
Now if some smart distribution maker (anyone, anyone) were to integrate that into their updates system, would that be so wrong?
We join this survey already in progress: Marketing Manager writes: "Anyone who's been in the job market knows how tough it is to find information about salaries and compensation. For system administrators, the search is compounded by the varieties of tasks, talents and responsibilities required to get the job done. Now there's something you can do to fix this.
SAGE invites you to participate in the 2000 System Administrator Salary Survey starting December 1, 2000. This annual survey is part of SAGE's ongoing effort to advance Systems Administration as a profession through information and advocacy. By participating in this survey, you join thousands of system administrators in examining the market and defining compensation according to your talents, your location, and your technical prowess."
So now you can find out where you stand in comparison to others with similar positions, perhaps a valuable bargaining chip come contract renewal (or incentive to check out a new city). The results will be available early next year -- automatically sent to SAGE members, available by request to everyone else.
Number One, can't you do anything about that rabble? bluets writes: "Some leading scientists and open-source advocates are attempting to raise awareness that the Celera/Science Magazine deal is a 'Big Mistake.' More details [here]."
And if you didn't know about this, it's only because you're not opening the barrel-of-monkeys Slashdot Science Section often enough. We're considering an experiment where everyone who opens it gets a food pellet, and everyone who doesn't ... well, do we have to bring out the Punishment Stick?
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Slashback: Plexion, Kernelism, Salaryness
The list grows of how many OSes Plex86 can boot. Soon you may have an easier time of installing a new kernel (besides turning to page 207 of Running Linux). SAGE wants to know the intimate, personal, steamy details of how much you earn as a SysAdmin. Also, not everyone trusts the proposed data-escrow deal involving Celera and Science. All below, in this episode of Slashback.Plex those muscles, yeah, and one and two and three ... dhunley expressed himself thusly: "A handful of days after getting Dos, Win95, and Linux to boot, Plex86 does it again! Initial support for booting QNX now works! Screenshot is here!" And shortly thereafter, the very same dhunley wrote: "Plex86 boots NT 4.0! Well, at least to the login dialog box. This is an old bochs disk image file. The mods will be uploaded to CVS soon."
Thanks, d. Watch out soon for an interview with bochs and plex86 lead Kevin Lawton, who promises to take time out from his busy schedule to tell you what's up in the worlds of emulation and virtualization.
While you're here, why not take a tour of the whinery? Apropros the wacky things that people have decided to put in the kernel lately (like GNOME ORBit), Booker writes: "Every time there's a major new kernel release, there's whining on Slashdot about killing uptime, and how much it sucks to have to reboot to get a new kernel. Well, whine no more.
Erik Hendriks at scyld.com brings us Two Kernel Monte, a 'kernel module which allows Linux to load another kernel image into RAM and restart the machine from that kernel.' The only major limitation appears to be that it will not work with SMP machines. Apparently Erik got the idea from the Linux Bios Project."
Now if some smart distribution maker (anyone, anyone) were to integrate that into their updates system, would that be so wrong?
We join this survey already in progress: Marketing Manager writes: "Anyone who's been in the job market knows how tough it is to find information about salaries and compensation. For system administrators, the search is compounded by the varieties of tasks, talents and responsibilities required to get the job done. Now there's something you can do to fix this.
SAGE invites you to participate in the 2000 System Administrator Salary Survey starting December 1, 2000. This annual survey is part of SAGE's ongoing effort to advance Systems Administration as a profession through information and advocacy. By participating in this survey, you join thousands of system administrators in examining the market and defining compensation according to your talents, your location, and your technical prowess."
So now you can find out where you stand in comparison to others with similar positions, perhaps a valuable bargaining chip come contract renewal (or incentive to check out a new city). The results will be available early next year -- automatically sent to SAGE members, available by request to everyone else.
Number One, can't you do anything about that rabble? bluets writes: "Some leading scientists and open-source advocates are attempting to raise awareness that the Celera/Science Magazine deal is a 'Big Mistake.' More details [here]."
And if you didn't know about this, it's only because you're not opening the barrel-of-monkeys Slashdot Science Section often enough. We're considering an experiment where everyone who opens it gets a food pellet, and everyone who doesn't ... well, do we have to bring out the Punishment Stick?
