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Improvements on the Scientific Review Process?

myc asks: "A recent story has discussed the pros and cons of the publishing end of scientific literature, but what about the review end? I work in biology and recently have run into a slew of frustrations trying to get my work published. For instance, one really frustrating thing is, because of the need to keep the reviewers' identify confidential, communication between authors and reviewers is essentially one-way via the editorial office. When the reviewers encounter something that might be confusing to them in the manuscript, they take it as a negative, when really a very simple explanation from the authors would clear it up. After all, its the scientific content, not 1337 wr171ng skillz that is being reviewed. What are some of the frustrations you have come across when trying to publish your work, and have you any ideas on how to improve on the review process?"

"Another really frustrating point is many people feel that some papers are accepted on the basis of the reputation of the senior author and not purely on scientific merit (i.e., the burden of proof is lessened for established scientists), while the opposite is true for younger investigators (i.e., the burden of proof for novel findings may be higher, sometimes unreasonably so). One's scientific pedigree also helps, to a certain extent (if you trained with a big name, you are more likely to get published).

In the examples above, 2-way communication via anonymous email between the authors and reviewers might solve this particular problem; also, I think that if the identities of the reviewers are protected, why not the authors? Perhaps a solution to my second issue would be to have the author's names hidden from the reviewers until after the review process is complete."

25 comments

  1. Communicate effectively. by Anonymous Coward · · Score: 4, Insightful

    "When the reviewers encounter something that might be confusing to them in the manuscript, they take it as a negative, when really a very simple explanation from the authors would clear it up. After all, its the scientific content, not 1337 wr171ng skillz that is being reviewed. "

    Well actually two things are important. The main material, and the other is your ability to communicate to others what's important. What good is the greatest idea ever discovered if people can't understand you?

    The other is true, and a bit regretable, if not at least understandable.

    1. Re:Communicate effectively. by myc · · Score: 1

      I agree that its important to communicate clearly. But how do you explain that one reviewer gives a glowing review, while another thinks its a steaming pile of dogshit? the assumption is that everyone comprehends at the same level, which is certainly not true. The negative reviewer is likely not a dumbass, he/she may just not be familiar enough with the literature. This becomes a problem when they send back a negative review w/o a clear understanding of the technical issues presented. surely you do not suggest that scientific literature be toned down to the lowest common denominator?

      --
      NO CARRIER
    2. Re:Communicate effectively. by the_ed_dawg · · Score: 1
      The negative reviewer is likely not a dumbass, he/she may just not be familiar enough with the literature. This becomes a problem when they send back a negative review w/o a clear understanding of the technical issues presented.
      In the words of my advisor, "Each paper should be a stand-alone work." The purpose of introduction and related work sections is to present these technical issues. The reader should know (a) why your work is important, (b) what has already been done, and (c) why your work is an improvement upon existing work. Part of explaining what has been done is defining key terms and concepts such that a capable researcher who does not share your in-depth knowledge of the problem can cobble together enough information to understand your paper. (Be sure to define all your acronyms before using them.)

      surely you do not suggest that scientific literature be toned down to the lowest common denominator?
      No, but it should be at the level of a researcher with fundamental understanding of your field. Writing about a specialized computer architecture for streaming media? Assume that your reader understands basic computer architecture. If the reviewer still complains about not understanding basic computer architecture, bring it up with the conference chair.
      But how do you explain that one reviewer gives a glowing review, while another thinks its a steaming pile of dogshit? the assumption is that everyone comprehends at the same level, which is certainly not true.
      Having had this happen recently, I can say that after being informed of the problem, it really wasn't clear enough for a casual reader. Maybe you just didn't explain a critical assumption well enough to get it noticed by a reviewer.
      --
      There are two types of people: those prepared for the zombie apocalypse and those who will be eaten.
  2. Two things by Smidge204 · · Score: 2, Interesting

    Two thoughts come to mind:

    First impression is that this could be a good application of the "open" community / wiki style of document management and review. The problem being that you would have to prevent the good informaton from being "polluted" by bias sources while still being able to filter out the bunk science.

    Second, as someone mentioned in the previous story, maybe it would be a good idea to cast off the anonymous review anyway!

    =Smidge=

  3. Clarity of exposition by GuyMannDude · · Score: 4, Insightful

    When the reviewers encounter something that might be confusing to them in the manuscript, they take it as a negative, when really a very simple explanation from the authors would clear it up. After all, its the scientific content, not 1337 wr171ng skillz that is being reviewed.

    I'm not so sure you can separate the two so easily. First, consider the fact that if the reviewer cannot understand what you are saying by reading your paper, many other people who will read your paper once it's been published won't understand it either. I can just see it: the reviewer asks the author a question using this email system you describe. The author explains their intent and the reviewer understands and accepts the paper. The confusing wording in the paper is never cleared up. Expecting all those people who have to read the thing once it's published to make heads or tails out of something worded poorly is just not fair. And don't give me the "once the author sees the reviewer's confusion, s/he will take it upon themselves to fix up the wording" bit. That would be really nice but don't count on it.

    Second, you seem to make the distinction between having great scientific thoughts and the ability to communicate them effectively. Brilliant physists like Richard Feynman were able to explain very complicated concepts to a wide audience. If you really, truly understand something you should be able to make it understandable to others. If you cannot describe something without falling back on a lot of jargon, then perhaps you don't really have that deep an understanding after all.

    Third, writing really isn't that difficult. Let's face it: a lot of science-types look down on those who majored in literature and humanities stuff in college. The feeling among scientists is that all the writing stuff is easy compared to the hardcore technical stuff that they do. If that's so, then prove it. It really shouldn't be too difficult for them to produce something reasonably easy to read. No one is going to kill you if you don't get all the rules for comma usage correct. But you should really have the ability to communicate your thoughts clearly to others in your field.

    GMD

    1. Re:Clarity of exposition by Lochin+Rabbar · · Score: 2, Insightful

      Good post, I agree with everything you say apart from one nitpick.

      writing really isn't that difficult. Let's face it: a lot of science-types look down on those who majored in literature and humanities stuff in college. The feeling among scientists is that all the writing stuff is easy compared to the hardcore technical stuff that they do.

      Speaking as someone who can write technical papers very well, but who can't write prose, other than poetry for love nor money I have to take issue with the typical 'scientist'. The two skill sets are very different. Good prose seems to depend on an ability to lay aside one's inhibitions and let yourself be exposed to ridicule, good technical writing sets emotion aside and concentrates on the argument.

      Now to add something to the debate: I have a rule for technical writing, and it is that before stating a conclusion the reader should have already reached that conclusion. If I can't achieve this then either my writing skills are lacking, or I have discovered a flaw in my argument.

    2. Re:Clarity of exposition by myc · · Score: 2, Interesting

      I'm not so sure you can separate the two so easily. First, consider the fact that if the reviewer cannot understand what you are saying by reading your paper, many other people who will read your paper once it's been published won't understand it either. I can just see it: the reviewer asks the author a question using this email system you describe. The author explains their intent and the reviewer understands and accepts the paper. The confusing wording in the paper is never cleared up. Expecting all those people who have to read the thing once it's published to make heads or tails out of something worded poorly is just not fair. And don't give me the "once the author sees the reviewer's confusion, s/he will take it upon themselves to fix up the wording" bit. That would be really nice but don't count on it.

      Why not? In publishing fiction and literature, is this not the realm of the editor's work? I submit that what you just described is exactly how scientific literature should be published. Referees judge on scientific merit, editors should facilitate communication to ensure that no misunderstandings are made.

      Second, you seem to make the distinction between having great scientific thoughts and the ability to communicate them effectively. Brilliant physists like Richard Feynman were able to explain very complicated concepts to a wide audience. If you really, truly understand something you should be able to make it understandable to others. If you cannot describe something without falling back on a lot of jargon, then perhaps you don't really have that deep an understanding after all.

      Not everyone is Feynman. and probably not every physicist can understand Feynman. I dunno, IANAP so I can't speak to that. It is clear that since biology is so specialized that people often working in labs next door to each other have no idea what each are up to. It's common for biology papers to be fairly concise and contain reasonable amounts of jargon, making it difficult for people not directly in the field. Of course there are the occasional ground breaking papers that touches on a subject so central that EVERYONE gets it; most papers are not of that caliber and are geared towards specialists.

      >Third, writing really isn't that difficult. Let's face it: a lot of science-types look down on those who majored in literature and humanities stuff in college. The feeling among scientists is that all the writing stuff is easy compared to the hardcore technical stuff that they do. If that's so, then prove it. It really shouldn't be too difficult for them to produce something reasonably easy to read. No one is going to kill you if you don't get all the rules for comma usage correct. But you should really have the ability to communicate your thoughts clearly to others in your field.

      again, how do you deal with incompetent reviewers? you basically get one chance at revision. if they are failing to comprehend at a very basic level, is it REALLY my fault as an author for failing to communicate my findings, or is it the editor's fault for not finding a more suitable reviewer?

      A recent reviewer asked us to do an experiment to prove/disprove a point, but what he proposed DID NOT ADDRESS HIS CONCERNS AT ALL. I won't go into the gory details, but if you know anything about biology, the analogy is that he/she asked for a Northern blot to determine where the RNA is subcellularly localized. It made ABSOLUTELY NO SENSE TO ANY REASONABLE PERSON. The other reviewer of our manuscript gave us enthusiastic support, and the work at a technical level was strongly supported by another expert in the field when we presented it at a meeting. I find it really hard to believe that we failed at either a technical or communicative level, we just go really unlucky with a reviewer.

      I don't know that constant anonymous email communication w/ referees is the answer. I do know that uninformed referees are a problem. They are supposed to provide oversight to the author's work; who is overseeing theirs? Certainly not the journal editors. They are so bogged down in submissions that out of practicality they must defer to the referee's decisions.

      --
      NO CARRIER
    3. Re:Clarity of exposition by The+Fun+Guy · · Score: 3, Insightful

      Absolutely. IAAS, and I review manuscripts for a number of scientific journals, mostly related to microbiology and microbial ecology. Only in a very few instances have I had to give a review of "Reject" based on poor language, and that was because the writing was so bad I couldn't make heads or tails of what the authors were actually trying to say that their data meant. Papers which were obviously written by authors whose primary language facility is not English need to be proofed/polished by a native- or fluent-speaker (assuming that the lanugage of the journal is English). I've given a review of "Revise extensively" on that basis, and have made that specific recommendation. If the paper conveys no useful information, wether because it's poorly written or uses bad experimental design or has overreaching conclusions, it doesn't belong in a reputable journal until those problems are corrected. The readership of the journal relies on the reviewers to make sure the papers are clear and of a minimum level of quality.

      Most papers are pretty well written, bearing in mind that we're not talking about gripping prose, here... it's technical writing of the style of "this is the objective, this is what I did, this is how I did it, this is what happened, this is what it means". Basic technical writing is an essential skill that the scientist has to have. If you just simply cannot string the words together properly, find a collaborator to clean up your text, and give acknowledgements as appropriate. Usually, I would give a "Reject" or "Revise extensively and re-submit" if there's a problem with the experimental design or statitistics used. Overreaching or unwarranted conclusions would also be a red flag.

      By the way, I have no patience with lazy or incompetent authors who submit crappy work and assume that the editor will polish it all up. Dot your own "i"s, cross your own "t"s, and you will fare much better in your reviews.

      --
      The man who does not read good books has no advantage over the man who cannot read them. - Mark Twain
  4. 3-way email is nearly 2 way by ghostlibrary · · Score: 4, Insightful

    In astronomy, the review process is straightforward-- I've had reviewers email me directly, or have emails forwarded by editors. An email being forwarded keeps anonymity and, if the editor is professional, adds little drag to the process. Perhaps a 1-day delay on what is typically a 2-week process of review.

    That said, since eBay, half.com, etc all have "send question to seller" that maintains anonymity but allows direct communication, I'd think a peer-review journal site could easily manage that.

    Already, things like ApJ prefer/almost require electronic submission, and have a page for authors to check on their progress. It'd be easy to implement.

    Finally, on anonymity-- the best reviewer comments I've received were from reviewers who declined to be anonymous. They were comfortable enough to communicate directly, and the work was better for it. So perhaps the very requirement of anonymity could be reconsidered.

    So, in short:

    1) Use electronic marketplace ideas to streamline and improve the review process,
    2) All anonymity to (like on slashdot) be optional.

    --
    A.
  5. publishing by mcelrath · · Score: 2, Informative
    If the reviewer can't get past your l33t wr171ng ski11z to figure out what the hell you're trying to say, that is a legitimate gripe, and in principle should be cleared up in the text without requiring communication with the authors. So your article gets rejected, you reword it, and resubmit it. Sounds like the review process is working fine to me. Sounds like you got burned. Pay an english major to read your stuff.

    Of course, the process could be faster, don't we all know. It can be upwards of 6 months to years to get an article published, depending on the journal and diligence of reviewers. But who has time to review? It's an unpaid, thankless job!

    Electronic journals, open, double blind review processes. Open archive (arxiv.org) for everything. That is the way this should go.

    -- Bob

    --
    1^2=1; (-1)^2=1; 1^2=(-1)^2; 1=-1; 1=0.
  6. Not much to be done by Compuser · · Score: 3, Interesting

    1. If anything I think anonimity of reviewers needs
    to be strengthened. Currently, you can guess who
    your reviewer is by the style of response, what
    issues the person raises etc. This allows the
    submitter to taylor response to the reviewer, i.e.
    it becomes a game of salesmanship. This is hard to
    fix but the point I am making is that it should
    go the other way: less personal more objective.

    2. Scientific logic is that it is better to not
    publish than publish something uncertain. So the
    assinine reviewers are the price you pay for a
    working peer review system. Ain't nuthin you can
    do about it, much like getting off on a technicality
    is a feature of our justice system.

    3. There are so many journals that the issue of
    stupid or stubborn reviewers should not deter a
    good paper from being published, you just have to
    try a few times. It is also possible to publish
    your work in conference proceedings where the
    review is a lot more lax. In short, insofar as we
    ignore the career-building aspect of publishing
    in a prestigeous journal, a good paper can be made
    public in so many ways as to be almost
    irrepressible.

    4. If your goal is career-building, then you have
    to deal with gatekeepers, no matter what the
    system. I suspect the current system is not too
    bad.

  7. Ummm by DorianGre · · Score: 2, Insightful

    How about learning to write better. You are looking for a complex solution to a simple problem.

  8. Anonymity for the author is impractical. by bcrowell · · Score: 1
    I don't think anonymity for the author is practical. For one thing, in the field where I used to do research (nuclear physics), there were only a couple of facilities capable of doing the same experiment, so everybody knew which experiments everybody else was doing. Also, people often do one paper as part of a broader research program, and they inevitably need to say stuff like "as discussed in our previous paper[3]..." The biggest problem of all is that people typically publicize their work long before it's sent to a refereed journal. You give talks at conferences, for instance.

    I also don't think that publishing is too difficult, or that reviewers emphasize style too much.

    Publishing is too easy; there are way too many expensive journals out there, and way too many papers in them that never get referenced even once in the later literature.

    The style of most scientific papers is agonizingly bad compared to the standards of other fields. As a reviewer, one of the big problems I often encountered was papers submitted by people whose English was so bad that you just couldn't understand what they were saying. A lot of those papers ended up getting published anyway. Once in a while my wife, who teaches French, leaves a literary journal in the bathroom, and I read an article just for grins. Although I often don't understand much of it, I'm always struck by how lively and entertaining the writing is.

  9. Well... by ByronEllis · · Score: 3, Insightful

    Have you ever considered that the article will be published in a journal and read by people without the benefit of two-way communication with the author(s)? If, for instance, reviewer confusion can be fixed with a simple explanation then why isn't that explanation in the article? Reviewer comments are just that: comments that will help you improve the article for resubmission, not some sort of scientific hazing ritual and anonymous communication may only serve to degrade the quality of publication.

    If it really bothers you that much, have colleagues not involved in the project review papers before submission and do the same for them.

    1. Re:Well... by Anonymous Coward · · Score: 0

      test1

    2. Re:Well... by Anonymous Coward · · Score: 0

      test2

    3. Re:Well... by Anonymous Coward · · Score: 0
  10. 2-way communication by Alomex · · Score: 2, Informative

    In the examples above, 2-way communication via anonymous email between the authors and reviewers might solve this particular problem;

    Actually all the journals I know of in computer science allow two-way communication anonymized via the editor.

  11. Improvements on the slashdot review process? by j1m+5n0w · · Score: 2, Funny

    I post to slashdot and recently have run into a slew of frustrations trying to get my posts modded up. For instance, one really frustrating thing is, moderators slap me with a -1 when they encounter something that might be confusing to them in the post. They take it as a negative, when really a very simple follow up post from the author would clear it up. After all, its the revevance of the content, not 1337 3ngr15h skillz that is being moderated.

    What are some of the frustrations you have come across when posting to slashdot, and have you any ideas on how to improve on the moderation process?

    Another really frustrating point is many people feel that some posts get an automatic +2 on the basis excellent karma, not purely on the merit of the post itself (i.e., the burden of originality is lessened for established slashdotters), while the opposite is true for posters with bad karma or a high account number (i.e., the burden of proof for creative posts may be higher, sometimes unreasonably so).

    One's list of friends and fans also helps, to a certain extent (if you are a friend of a slashdot Rock Star, you are more likely to get modded up).

    In the examples above, a follow-up anonymous coward post by the reviewer might solve this particular problem (lest the reviewer lose the ability to moderate by posting with his regular account); also, I think that if the identities of the moderators are protected, why not the authors? Perhaps a solution to my second issue would be to have the author's names hidden from anyone with mod points (as in metamoderation).

    -jim

  12. Faster process by menscher · · Score: 1

    My first attempt at a scientific publication was a total eye-opener into how bad the process can be. I submitted a paper, and the editor forwarded it on to a referee. No word back for a month, so we complained. Eventually the editor passed it on to another referee. That one took about 3 weeks to respond, at which point they said that we weren't doing anything new --- someone else had done the same thing a month ago! (It wasn't even published yet.) If not for the first referee refusing to respond, we would have been the first. Very frustrating. They should have a 1-week time-limit for referees to respond.

    1. Re:Faster process by RackinFrackin · · Score: 1

      someone else had done the same thing a month ago

      That's a raw deal. The way I see it, if you submitted your article before the other persons' article appeared in the literature, then it should have been given full consideration.

      They should have a 1-week time-limit for referees.

      I can see your point, but a week isn't realistic. Most (if not all) scientific journals use volunteer referees, and most of these guys are profs with busy schedules, and you can't expect them to drop everything and give the paper a thorough proofreading. Even if they did, a week probably wouldn't be long enough -- checking all the proofs and reviewing the literature to determine whether the results are new can also be a very time-consuming process. That said, I'll agree that there should be some sort of time limit on the referee. I once had a paper spend a year and a half in the refereeing process.

  13. Scientific validation of peer review by Phronesis · · Score: 1
    Peer review is in the funny situation that it fails basic tests of reproducibility that we would require of the experimental methods in scientific papers.

    We don't have a better alternative to peer review, but it's well known that you can send the same paper or grant proposal to several different groups of qualified peer reviewers and get completely different reviews.

    This is gnarly enough for publication, but if public policy depends on it (e.g., peer review of the scientific basis of environmental regulations at EPA and FDA) peer review can go completely to hell.

  14. The sheer volume proves that the process works by fooguy · · Score: 1

    I used to work for AAAS, the publishers of Science Magazine. Science is the premier and oldest peer reviewed general science journal (about 150 years). One of my projects was working on their Manuscript tracking system, including making the submission process electronic through Submit To Science.

    Science has a greater-than 80% rejection rate, because there are only so many pages in the magazine. Many people are frustrated that they've been rejected five and six times (they have about 20 years of author submission history online), but with a general science journal you have to pick the best of the best astronony and biology and signal transduction papers to print.

    The review process is laborious, it involves a lot of people, but it works pretty much flawlessly. Certain aspects have evolved over time, but frankly the people who get published thing the process works and it's great, the people who don't are the ones who grouss. There are constant arguments (almost every week) about what concessions can and cannot be done without risk to watering the quality of the journal down.

    --
    "All I ever wanted was to see Larry Wall give Bill Gates a Perl necklace."
    http://www.eisenschmidt.org/jweisen
  15. Anonymous email would help grant review more by Anonymous Coward · · Score: 0

    Anonymous email wouldn't help manuscript review much, but it could help grant review. If a reviewer misunderstands a manuscript, you should revise the manuscript, as others have noted. But revising a grant proposal often means waiting a year. Grant reviewers should have the option of contacting PIs anonymously by email. As a reviewer, I wouldn't bother doing this for a sloppy proposal, but might if I had one or two specific concerns about an otherwise excellent proposal. Unfortunately, half of proposals are good and only 10% can be funded, so some good proposals will always be rejected.