Bioinformatics Graduate Schools?

coopergm asks: "I am an undergraduate nearing graduation, majoring in Biology and Mathematics & Statistics, with a bit of Computer Science as support. What graduate school (PhD) programs out there are the best for computational biology and bioinformatics? Obviously, Stanford, MIT, and Washington University in St. Louis have a serious edge by virtue of being associated with one of the major human and mouse Genome Sequencing Centers. How would one differentiate between these three? Are there other schools offering competitive bioinformatics programs in terms of reputation, quality of research and educational experience?"