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64GB RAM Under 64-bit Linux?

gary.flake asks: "My group at NECI is in need of a machine that can address 64GB of ram in a single process. This means we need 64-bit addressing. We'd prefer to go with a Linux solution because all of our development is under Linux. We've spec'ed out some reasonable machines (Dell can do 32GB, and Compaq can do 64GB) but they seem to be lacking in that they can only be loaded up with 4 x 800Mhz Itaniums. We would really like to have more processing power (2 Ghz x 4 would be a dream). Does anyone know of any monster Itanium machines that will meet our needs? (Please, no Alphas). Finding such a beast is harder than you'd think."

16 of 36 comments (clear)

  1. 2GHz not in the near future... by RadioheadKid · · Score: 5, Informative

    This article from The Register has a some info. on the Intel server processor roadmap, although not much about processor speeds. Last I heard the McKinely was going to ramp up to 1.5GHz and seeing that the Madison will start at 1GHz that one is probably the best bet for getting to 2GHz and according to the Register article, its not set to be released until early 2003.

    --
    "Karma can only be portioned out by the cosmos." -Homer Simpson
  2. You're silly, or in a STRANGE NIICHE'. by AtariDatacenter · · Score: 3, Insightful

    So I'll say what nobody has said until this point. (If you find this in Metamod, and it is marked 'redundant', please SPANK the moderator for me.)

    Either you've got something REALLY REALLY strange going on, or you've got an incredibly strange niche' you are programming in. Your best bet is to spend a few brain cycles and figure out a way to do it WITHOUT 64gb of RAM.

    However, if you're hell-bent on getting some CPUs that run Linux, and your budget is unlimited, go for a Sun Ultra Enterprise 10000. Other downside? You'll need a minimum of 16 CPUs to go with that 64 GB of ram (unless Sun released higher density ram chips that were certified for the E10k while I wasn't looking, in which case, you'll only need 8 CPUs). Expect to pay $1-2M.

    And then if Linux has been ported to the UltraSparc III processor, you might be able to get away with something smaller. But the Sun V880 will only go 8 CPUs at 32GB. You'll need at least a Sun Fire 3800 to do the job of 64GB. Probably will take 4 processors to make the 64gb available.

    The biggest memory being put out for PCs right now are 1gb modules (that I've seen). I don't think you're going to find a motherboard with room for 64 memory modules. Or even 32.

    Time to rethink what you are doing, or throw lots of money at it. That money, though, would probably be better spent at buying the brainpower to rethink it.

    Sorry.

    1. Re:You're silly, or in a STRANGE NIICHE'. by penguinboy · · Score: 3, Informative

      4GB SDRAM DIMMs exist. A quick trip over to Pricewatch shows that Mushkin, for one, makes these things. Prices start at about $1,300. (I'm not saying that Pricewatch components are necessarily approriate for this application, but they do exist.)

    2. Re:You're silly, or in a STRANGE NIICHE'. by PD · · Score: 2

      (sarchasm on)

      Maybe instead of a 32-bit machine they should just use a Turing machine? They could use their brainpower to get it working on that just as easily. A commodore-64 hooked up to a mag-tape reader, with a really long tape could do the job.

      (sarchasm off)

      I guess my point here is that they are a research institute, and it looks like they are doing some strange things there. The probably *can* afford the machine, and it's probably going to be cheaper to throw hardware at the problem that it will be to hack at the problem to make it computable in awkward hardware.

    3. Re:You're silly, or in a STRANGE NIICHE'. by AtariDatacenter · · Score: 2

      BAH! Mushlom = Mushkin. I'm a dumbass.

    4. Re:You're silly, or in a STRANGE NIICHE'. by AtariDatacenter · · Score: 2, Insightful

      The probably *can* afford the machine, and it's probably going to be cheaper to throw hardware at the problem that it will be to hack at the problem to make it computable in awkward hardware.

      Probably a dangerous response to give on Slashdot, but if they've got money to burn, typically speaking, they're not going to be as Linuxcentric as the submitter seems to say they are.

      The posting would have gone more like, "We're about to spend $1M on hardware to do this. But if you can tell me some hardware we can do this with on Linux for the cheap, I can convince them!"

    5. Re:You're silly, or in a STRANGE NIICHE'. by PD · · Score: 2

      Probably a dangerous response to give on Slashdot, but if they've got money to burn, typically speaking, they're not going to be as Linuxcentric as the submitter seems to say they are.

      "Money to burn" is not the proper way to put it. That implies that they have Gates' bank account. "Adequately and properly funded" might be the right way to put it. If they are working on problems that need a 64 gig address space to solve cleanly, then adequate funding would be enough to buy a machine that would support the research.

      Also, these are researchers. Open source usually comes naturally to researchers. After all, they are probably going to try to publish something. Those sort of people would naturally use Linux, not Windows.

    6. Re:You're silly, or in a STRANGE NIICHE'. by ameoba · · Score: 2

      What seems really strange to me is that he wants to have 64GB or RAM but only wants 4 CPUs. Of course, I'm assuming that whatever research is being done here involves some major number crunching abilities, and having only 4 CPUs, even at 2GHz, just doesn't deliver on that point.

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  3. It's going to cost by green+pizza · · Score: 5, Informative

    You don't have too many options if you need 64 GB of ram in a single image (not a cluster)...

    SunFire 3800
    According to the techpub, you'll need both CPU trays (but perhaps with each only half populated with CPUs -- 2 + 2 = 4 CPUs) to house enough memory modules for 64 GB. Base price for a 3800 is $160,000 for two boards. Plus unique RAM (currently $1700 per GB). Keep in mind that the 3800 cannot be upgraded beyond 64 GB or 8 CPUs.

    AlphaServer GS80
    Looks like you'll need at least 4 CPUs to handle the 64 GB. Base price seems to be around $140,000. Plus unique RAM. Keep in mind that the GS80 cannot be upgraded beyond 64 GB or 8 CPUs.

    IBM P660
    2 - 8 CPUs. Up to 64 GB RAM. Starts at $66,000. Plus unique RAM. Runs the Linux-Friendly IBM AIX 5L. Keep in mind that the P660 cannot be upgraded beyond 64 GB or 8 CPUs.

    SGI Origin 3000
    Looking at about $220,000 for one that can accomodate 64 GB. Plus unique RAM (about $900 per GB). The 3000 can be upgraded to 1024 GB (1TB) of RAM and 512 CPUs as a supported configuration. 1 TB and 1024 CPUs unsupported and requiring unsupported OS patches.

    Origin 300 would be *much* cheaper, but it only supports 32 GB right now (it will support 64 GB when SGI ships their high density memory modules) and it's nowhere near as expandable or upgradable as the 3000. Origin 300 cannot be upgraded beyond 32 CPUs and will most likely never support more than 64 GB of RAM.

    IBM is your best best.

  4. big iron doesn't use commodity ram by green+pizza · · Score: 3, Informative

    Typical big iron uses very custom components. For example, the Origin 3000 uses DDR-SDRAM chips, but on a memory module that also includes "directory ram" and some other oddball components. The O3K has also been using this ram since about 6 months before desktop PCs began using DDR, so they didn't really have a chance to embrace now-popular standards.

    Sun's ram is similar. Sun uses slightly slower chips, but has many in parallel with some ungodly wide bit paths to and from the memory modules. Again, it's much different than what we have in our desktop PCs.

    Keep in mind that these monster machines were designed with some insane requirements and low tolerance for error. As such, they often require much different components to keep everything working. Recall that most DDR-SDRAM based PC mobos up until the past few months shipped with two or three DIMM slots rather than four or eight because of timing and signal issues that hadn't been resolved yet. Big iron systems from Sun, IBM, and Compaq support over 100 CPUs, over 200 GB RAM, and do so without (many) problems. SGI's Origin 3000 supports up to 1 TB of RAM and 512 CPUs per single system (and several such huge machines can be clusterd via multiple 8 gigabit GSN networking connections if a task requires insane compute power).

  5. Re:Why 64 bit? by green+pizza · · Score: 2

    You'll probably want something with greater than 36 bit addressing if you're actually today going to buy a machine with 64 GB of RAM? Why? Because you'll want to do some upgrades in time. Even if you plan on replacing the beast with a cheaper, better, faster one down the road, you'll at least want to add some ram to the old one and use it as a backup or secondary machine.

    A good rule of thumb is to never buy an already maxed out system. If you can afford and *need* a machine with 64 GB of RAM today, you very much need one that can handle at least 128 GB for future upgrades.

  6. Some jobs do need 64GB RAM by wmshub · · Score: 3, Interesting
    I can't believe the number of people implying that this guy is an idiot for needing 64GB RAM. People, not everybody uses their computer for browsing the web and playing Quake. There are some scientific applications out there, that are extremely important to people with lots of money, where having 64GB worth of fast-access matrices/hash table/etc. will let you do experiments that are simply not possible if you are limited to 1GB or if your data is on disk or across a network where access will be orders of magnitude slower than RAM. Give the guy a break, if he's seriously considering buying 64GB quad-itaniums, then I think you can assume that he has done the homework and figured out that it will be worth the money.

    What surprised me is the "please, no alphas" comment. A bunch of alphas will have much higher performance than 4 itaniums. Yes, it is end of life'd, but when you are spending hundreds of thousands of dollars on your computer, worrying about the cost of porting to a new architecture when you replace this computer seems penny wise and pound foolish. Besides, as long as you are using the same OS and compiler on both old and new platforms, the "porting" should be mostly just a matter of recompiling.

    1. Re:Some jobs do need 64GB RAM by green+pizza · · Score: 4, Informative

      I can't believe the number of people implying that this guy is an idiot for needing 64GB RAM.... There are some scientific applications out there, that are extremely important to people with lots of money, where having 64GB worth of fast-access matrices/hash table/etc. will let you do experiments that are simply not possible if you are limited to 1GB

      Very well put. I do a great deal of work with my university's high performance computing lab and have been exposed to this area for almost four years and continue to be amazed and blown away. By far our most demanding users are from the meteorology research group -- an organization that has been on the forefront of many new weather modeling and weather analysis applications. Their batch jobs range from crazy to insane when it comes to CPU and RAM usage and have allowed for many interesting case studies with single machines, clusters, and different platforms.

      Some random observations:

      Many of the jobs the meteorology folks run consume 8, 16, or even 32 GB of RAM per instance. Most jobs keep the disk arrays clattering away like a drive stress test. They've tried our cluster and tried our SunFire, but prefer the Origin 3000 (and for lesser jobs, the Origin 2000). Unlike "simple" partitionable tasks such as rendering (or SETI@home), their batch jobs don't take to clustering too well.

      Many of our users put preference to total system size and maturity/support of the compilers moreso that the speed of each CPU or the newness of the software. We still have groups that prefer the Origin 2000 over anything else. One user wants us to invest in commercial fortran compilers for the Linux cluster. Many users simply prefer a single large system such as the Origins and the SunFire.

      A few users continue to push the envelope. One that comes to mind has been asking for some adjustment to job quotas so that his app can utilize 128 GB of RAM. We're still not sure *what* he wants to do with that ram and are still waiting to hear back from him.

      Not everyone uses their machines to surf the web, compile software, or even manipulate 256 megabyte files in Photoshop... for those that handle several terabytes of data every half hour and need to have half a terabyte or more in ram at any given time.... for those people there is truly big iron and it's available today (and yesterday). I belive we had an SGI Challenge XL with 36 R10K/195 CPUs in 1995. Two years ago we got a 128 CPU Origin 2000 and a 64 CPU SunFire. This summer we finally recieved a 256 CPU Origin 3000 with 512 GB of RAM. Big Iron costs a fortune and isn't for your highschool, your ISP, or even for your bank. But for those that *need* it, it's worth every penny.

  7. What do you want from the guy? by mushon · · Score: 3, Insightful

    If somebody would have bothered to check, the man is a Research Scientist Computer Science (lookup Gary Flake) in the NEC research instiute, with only 70 more researchers with him in the whole place, and let me guess that he has a lot of money to spend...

    Give him a little credit, that what he is doing is probably worth the time and effort he is putting in to it, and be thankfull that you are here to hear about such a project (if he'll only tell us what it's about ...)

  8. More information from the poster by gary.flake · · Score: 4, Informative
    I am the guy that posted the original question.

    A suprisingly large number of responders have asked why anyone would need 64GB, and have speculated that we are either lazy, stupid, or have money to burn. While I can't reveal too much, I'll try to give you an approximate idea of the sort of problems that we are working on.

    Basically, we are doing two things: graph theoretic algorithms on graphs with hundreds of millions of vertices and billions of edges, and robust classification systems trained on training sets of a similar size.

    For our purposes, we need to access these data structures in a deterministic order that cannot be predicted in advanced. We could cache all of our data structures on disk, but the algorithms would require years to complete because of disk seek time. Instead, we are going to try to keep a compressed version of the data in memory. The difference is that the in-memory approach will take minutes as opposed to years.

    And if you are thinking that we need a new algorithm, trust me on this, we are using the faster algorithm. Most of the other candidates run in exponential time.

    If you want a real clue as to what we're doing, then read this. If you like what you've read and think you can help, then contact me. I am hiring.

    1. Re:More information from the poster by AtariDatacenter · · Score: 2

      Wish I was able to pull up the postscript right now. A couple of quick ideas:

      If you go with IBM/Sun/Whatever, lease your hardware. You'll save a good deal of money that way.

      Also, if it isn't practical to get the configuration you achieve (say, sticking with Intel hardware), you might consider solid state drives as an alternative. Not as fast as RAM, but substantially faster than disk, and will typically saturate an UltraSCSI bus with just one drive.

      I realize you are in research. It has just been my experience that when the user community comes knocking at my door with some outrageous demands, chances are, there is a better way that the problem can be solved. I apologize for implying you are a qwack.

      Can't wait to read that postscript later.