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Supercomputers To Move To Specialization?
lucasw writes "The Japan Earth Simulator outperformed a computer at Los Alamos (previously the world's fastest) by a factor of three while using fewer, more specialized processors and advanced interconnect technology. This spawned multiple government reports that many suspected would ask for more funding in the U.S. for custom supercomputer architectures and less emphasis on clustering commodity hardware. One report released yesterday suggests a balanced approach."
The two studies resulted, in part, from NEC Corp.'s May 2002 announcement of the Earth Simulator, a custom-built supercomputer that delivers 35.8 teraflops. That system packed five times the performance of the fastest U.S. supercomputer at that time...
"The Earth Simulator created a tremendous amount of interest in high-performance computing and was a sign the U.S. may have been slipping behind what others were doing," said Jack Dongarra...
Graham said researchers should not overreact to NEC Corp.'s Earth Simulator that blindsided many in the high-performance computing community eighteen months ago by delivering a custom-built system five to seven times more powerful than the more off-the-shelf clusters developed in the U.S.
I don't mean to draw a crude analogy here, but I really can't help but read this and be reminded of the space race.
It took Sputnik to kickstart our spacemindedness; I for one consider it sad that a "tremendous amount of interest" -- and the funding that comes with it -- in high-performance computing seems only to have arisen/regenerated with the influence of competitive international politics. Are we really so hardly advanced that our respective national egos are still the driving force behind enthusiasm, financial or otherwise, in certain areas of science?
The coolest voice ever.
Specialized hardware (almost) always outperforms commodity stuff.
I use custom designed amplifiers because they work better for my application. I could buy off-the-shelf stuff (~$500~$10,000 range), but that won't be exactly what I want. I use custom software too... know why? Because it's designed specifically for the job. That same software shouldn't really be used for other fields of research, neither should my amplifiers. The thing about this stuff is that it takes a lot of time to maintain (plus initial development). That means grad students, postdocs, and technicians who may spend over 90% of their time just keeping systems in working order and/or adding features. The benefits of customized hardware/software, in this instance, is worth the headaches associated with it.
All of my optics is commodity stuff (some is rare/exotic, but it's still basically black-box purchasing). I don't have the facilities to make coated optics, nor do I need anything that specialized, so... I just buy it.
When I was in telecom, we used Oracle and Solaris and Apache. It worked, and the cost of developing the same functionality in-house was ridiculously high (plus we'd never get to designing our products that sit on top of it).
Eventually, it always comes down to a comparison between the cost (man hours, equipment, etc) of custom building and of integrating stuff from OEMs.
So, the question our labs need to answer is, does clustered COTS hardware get the job done? Supplementary to that, is it cost-effective to buy/design it in light of the previous answer?
In any field where you are pushing the limits of technology, you have to make such trade-offs. Personally, I don't care who has the absolute fastest supercomputer (measured in flops, factoring-time, whatever)... what really counts is, who does the best research with the supercomputers.
Down with Saudi Arabia!!!
Specialized systems are almost always going to outperform generalized systems when you're dealing with similar levels of technology (for instance, specialized abacasuses vs. a generalized Cray T3E).
;))
The great thing about generalized systems is you can use them to explore new areas, then design a specialized system to take advantage of specific optimizations the generalized one can't support.
I'm glad for the report suggesting a "balanced approach". I can't imagine forsaking one type of system for the other, as each has its place. (Uhoh... generalized systems have a "place"? Does that mean they're specialized at being generalized? Oh, the irony!
bytesmythe
Hypocrisy is the resin that holds the plywood of society together.
-- Scott Meyer
The problem is that it may not be possible to match the computation of a cluster with specialized interconnects using just commodity hardware no matter how many machines you throw at it. If a simulation has a low computation to communication ratio it's scalability is bound by the perfomance of the interconnects. In this case throwing more commodity machines at the problem will actually increase the total time required to run the experiment.
There is also a direct trade-off between more general purpose systems and systems custom tailored to a task. Good examples are Deep Blue and Blue Gene. Both of these systems are designed with a particular task in mind (i.e. chess and protein folding) and therefor are able to leverage knowledge about the problem space to constrain the kind of hardware, the particular low-level instructions and the information flow within the system while achieving signifigantly greater performance on a small class of problems. I work with clusters that are used in scientific communities that have various researchers working on various problems. In these cases, the questions are about basic applicability of a particular problem to a particular architecture. For example a cluster with high-speed interconnects made of good COTS hardware will allow a user with a very granular problem to effectively use the cluster and it will also allow a user who needs the high speed interconnect because the problem space demands a high degree of internal communication. But the first researcher might also be able to make use of a grid of (for instance) many more computers with a total lower cost because (s)he doesn't need the high speed interconnect. The Earth Simulator gains a lot of performance (on a class of problems) because of the underlying vector processor architecture. Given the right internal bus it is conceivable that adding vector processor daughter boards to the next generation of COTS clusters could achieve similar results--but, of course, only for problem spaces that make efficient use of such processors and aren't bottlenecked by the communication requirements.
Real answers are always more complicated. For example: the equations needed for nuclear simulation will probably require dedicated hardware (as the need for protein folding has lead to Blue Gene) to achieve the results that the Pentagon needs. But for many super computing tasks, the flexibility of COTS clusters will still be compelling, especially for areas where the algorithms are not yet fully developed (e.g. brain simulation). An interesting keynote at OLS 2003 argued that (some of) the problems are not going to be the local computing power but the need to move large quantities of data between research labs across the world and combine computational systems using the 'grid.' (For a down home examples of problems that have been successfully tackled through course granular distribution just look at SETI@Home and Distributed.Net. So its not just the flops anymore...