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Open Species Database Breaks Half-Million Mark

ferienhausversicherung writes "Biologists estimate that about 1.75 million species, from bacteria to blue whales, have already been identified on Earth. But there may be anywhere between 3 million and 12 million more yet to be discovered. An online catalogue of all known life on Earth now has half a million species in its freely available database. Another promising effort is Wikispecies. Started in August 2004, this is an offshoot of the Wikimedia group, whose free online encyclopaedia is constructed by users themselves." (And Wikipedia itself is about to publish its 500,000th English entry -- if you hurry, perhaps it will be yours.)

32 comments

  1. project proposal: digital ecoregion map? by Anonymous Coward · · Score: 3, Informative

    A terrestrial ecoregion map of the Earth is available from the National Geographic Society and WWF - United States as their "terrestrial ecoregion map" showing the 8 terrestrial ecozones. According to WWF-US this is "a project which involves describing, mapping and photographically representing 867 Terrestrial Ecoregions of the World. These ecoregions are divided based upon geography, climate, soils, and vegetation... technical descriptions, species lists, educational excerpts, and photographic depictions of each ecoregion... for educational purposes only."

    Understanding most environmental security problems requires some base map. Unfortunately these maps are not available generally in digital map form, which is one reason a digital ecoregion map standard is required.

    There is a digital map petition urging the publishers to make the material available electronically under Creative-Commons by-nc-sa. This helps those interested in helping preserve the 238 Global 200 priority ecoregions and complements WWF's own plans: "Every school in the United States will be sent 10 ecoregion maps and teachers guides to get students interested in visiting the web page. Each ecoregion page will include educational descriptions highlighting important biodiversity features of the ecoregion and a summary of the conservation situation. The technical descriptions detail the biology and status of each ecoregion. There also will be one or more photographs depicting the natural habitat of each ecoregion. It has been a Herculean task to gather photographs of natural habitats of the world. We could not have accomplished as much as we have without your willingness to contribute your images." - David M. Olson, Ph.D., Director, Conservation Science Program, World Wildlife Fund US, email: david.olson wwfus org.

    Current the WWF-US seeks only "a) the right to publish the photographs on the World Wide Web as part of the Wild World educational web site created by WWF in association with National Geographic Society, underwritten by Ford Motor Company; b) The right to crop and otherwise alter and edit the photographs, as WWF deems appropriate, to fit space or to enhance the function or effectiveness of use of the photographs."

    This comment is licensed under CC-by-nc-sa 2.0 - see http://www.livingplatform.ca/tiki-index.php?page=e coregion+map.

  2. wikispecies by jericho4.0 · · Score: 2, Interesting
    Wikispecies is pretty slim right now. If you keep clicking 'random page' all you get is 'Taxonavigation' index pages....I suppose it has to start somewhere.

    Wouldn't it be more usefull integrated with the Open Species Database?

    --
    "A language that doesn't affect the way you think about programming, is not worth knowing" - Alan Perlis
  3. I find it funny by KinkifyTheNation · · Score: 1

    Strange how people seem to be more interested in finding life on other planets, while we still haven't even found everything here yet.

    This achievement is great and all, but is there a link to the aforementioned database?

    1. Re:I find it funny by FleaPlus · · Score: 2, Insightful

      One goal involves understanding Earth's biosphere more thoroughly. The other goal involves discovering a completely new biosphere, likely to be radically different from our own. Both are important, and I'm not sure why you find it strange that some people would happen to be more interested in one than the other.

    2. Re:I find it funny by Anonymous Coward · · Score: 1, Insightful

      > Strange how people seem to be more interested in finding life on other planets

      No it isn't. Finding life on other planets would be the most important find since fire. It would change the religious and philosophic views of billions of people. It would mean we are not alone. It would teach us a great deal.

      Finding another version of a spotted frog or deep sea worm is pretty great, but pales in comparison to the above.

    3. Re:I find it funny by Neil+Blender · · Score: 1, Insightful

      You know what I find funny? The fact that we don't know everything about chemistry yet some people are interested in history. Some people even devote their entire lives to the study of history. All the while we don't know everything there is to know about chemistry. I've never understood that.

    4. Re:I find it funny by finkployd · · Score: 1

      No it isn't. Finding life on other planets would be the most important find since fire. It would change the religious and philosophic views of billions of people.

      Not to understate the importance of such a find, but how would this change anyone's religious or philosophic views?

      I don't know of any religious teaching that address life on other planets, but then I don't know of any religious teaching that address nuclear fusion either.

      I'm not trying to be a smart ass (although probably succeding), I'm just curious why you feel this would have that kind of impact.

    5. Re:I find it funny by Anonymous Coward · · Score: 1, Interesting

      Not the other poster, but I heard a CNN interviewer asking NASA folks about the possible religious impact of finding life on mars.

      The whole "religious impact" meme surely didn't just pop out of thin air. There is probably a minority of people out there who insist that Earth is the only planet with life in the universe.

    6. Re:I find it funny by tigersha · · Score: 2, Interesting

      TO some degree this is because they have not thought about it. Most people will not give you an answer because it has never entered their minds.

      THe queestion is, what will happen IF we discover life, especially intelligent life out there. I once attended a discussion by fundamentalist Christians about the issue and they immediately stated that bringing the word to the Aliens would be an immediate priority. For most people first contact would probably be meaningless in any case especially if we find microorganisms in our own Solar System (which is much more likely IMHO)

      The other thing about microbial life on Mars is that there would be a good chance that it would be a panspermic event, so it would have the same building blocks than our own. Ie, spores of them went there from here on a meteor. Which would make the hole philosophical debate moot.

      --
      The dangers of excessive individualism are nothing compared to the oppressiveness of excessive collectivism
  4. Re:First in the Species to Post by Anonymous Coward · · Score: 0

    Out of 6 billion strong human species, I am the first to post in Slashdot on this article...woooohooooweeee...heeeee!

    i am sorry, but apparently you have fallen short on the tree of evolution...

  5. how odd by Fry-kun · · Score: 1

    does anyone else find it odd that such articles (i'm talking about nature.com's article, not the /. article) rarely include actual links to the websites they're referring to? I swear, this is like a conspiracy of the journalists...

    --
    Did you know that "FTW" ("for the win") is a direct translation of "Sieg Heil"?
    1. Re:how odd by monkeyserver.com · · Score: 1

      I was just going to say that. Seriously guys, it's like: "New website has cure for cancer!!", then go on to talk about cancer and a cure, but never mention it. I can google and all, but it sounds like these dudes are still stuck in the paper age... "Why would I put a link?". duh.

      --
      http://monkeyserver.com --- weeeeee
  6. Wikispecies seems a bad idea by Smilin · · Score: 3, Insightful

    Is is just me or does this seem a really bad idea? With Wikipedia you know what you are getting. The information is most likly correct but you'll take it with a grain of salt just to be sure. You don't really go there when doing research right?

    With Wikispecies it's information that is scientific in nature and accuracy becomes paramount.

    How long until everyone settles on the truly accurate definition of the Basselope? How about the purple-headed trowser snake?

    Bad idea I say.

    1. Re:Wikispecies seems a bad idea by Anonymous Coward · · Score: 0

      Its not a bad idea to essentially produce an encyclopedia of the plant, animal, and bacterial kingdoms, but it is certainly wishful thinking to assume that a largely scientifically illeratae readership will be able to distinguish fact from fiction.

      The fundamental fallacy with wikispecies is that it has no mechanisms for attribution or sourcinng of facts. If you do do not know who is responsible for which "fact", what references or studies are pointed to as the basis for their suposition, or what lines of reasoning were used to conclude that the "facts" are in fact "facts", then one will never be in a position to evaluate the origins, nature, and consistency of these "facts".

      Science is based on observations and the study of the pattern of consistency and inconsistency of such observations in the context of hypotheses and theory (please don't mix up the two). Science is a way of knowing, it is not a collection of facts. The average person seems not to understand this, which is not surprising since science is so rarely taught in coursework the average person takes during their elementary and secondary educations.

      Wikispecies does not provide citations, nor distinguish its facts into those which are the products of experts (persons with intimate familiarity with scientific observation) and those by the rest (whose observations may not even be necessarily constrained by reality).

      If they could establish a bona fide mechanism for attribution, where scientific integrity is at stake, it might have a chance. Otherwise its just another exercise in internet surfing. I would nonetheless say even learning a little about the biological word might be a lot better than nothing.

      I am more concerened with the feeling of some widely recognized "experts' that such a project would have scientific merit, without such mechanims for self correcting. While it may be potentially self correcting, without attribution there is no clear certainty that an convergent outcome would be forthcomming and such convergence would in fact ressemble "scientific fact".

  7. On Extinction by oni · · Score: 3, Interesting

    I'll probably get flamed for this, but the fact is that there are millions of species on Earth, and as part of the natural process of evolution hundreds of new ones evolve every year - but the other side of that coin is that hundreds go extinct every year. We have to balance environmentalism with a healthy dose of logic. We can't cry over every extinct species, and we can't preserve them all.

    Obviously, I'm not talking about successful species that are hunted to extinction by humans. I know I'm going to get 50 replies from people who swell up with emotion and react to my words rather than thinking about them, who are going to say, "yeah, but humans cause extinctions." I know that. Thanks. My point is that there are millions of species on the planet and extinction and evolution is a natural process that occurs whether humans exist or not.

    I just finished reading Bill Bryson's excellent book, A Short History of Nearly Everything. There's a great story about a tiny island off the coast of New Zealand. The first human to ever live on that island was a lighthouse keeper. It turned out, he had a cat. Every few days, the cat would drag the carcass of a dead bird into the house. The lighthouse keeper sent one of these dead birds to a university professor who recognized that it was a new species, never before seen by science. The professor made the trip down to the island, but by the time he got there, the cat had killed every bird on the little island. Apparently, those birds didn't live anywhere else. They've never been seen again. In less than a year, one cat had made an entire species extinct.

    Many an environmentalist will tell you that the point of the story is how destructive human beings are. But I think that if you look at this logically, you'll draw a different conclusion. Long before man arrived, that species of bird had failed to evolve a solid foothold in its ecosystem. With all of New Zealand right there, the best that bird could do was live on one tiny island. It's true, that cat wiped them out. But it's also true that, all by itself and without any human influence, that species had dwindled to down to a population tiny enough to be destroyed by one cat. Had the cat not come along, the next hurricane to hit the island would have made them extinct anyway.

    So, there are millions of species on our planet, and I think we should study and catalog all of them. But let's also acknowledge the fact that no matter what we do, 99.9% of those species are going to be evolutionary dead ends.

    1. Re:On Extinction by Anonymous Coward · · Score: 1, Insightful

      Not every species is equally important. If the hundreds of extinct species are large mammals, and the hundreds of new species are bacteria, then soon we'll be back to a primitive Earth with bacteria only.

    2. Re:On Extinction by Seraphim_72 · · Score: 2, Insightful
      But I think that if you look at this logically, you'll draw a different conclusion. Long before man arrived, that species of bird had failed to evolve a solid foothold in its ecosystem. With all of New Zealand right there, the best that bird could do was live on one tiny island.
      ...Or perhaps the species had reacently come about and was waiting for said hurricane to blow it to other islands to help its own little Diaspora. Or perhaps it's evolution had just started and given another hundred years population pressure would have forced members of the species to start to try migration. Or perhaps the spieces was in a state of flux gettting yeady for some individuals to evolve into yet a different species one that would have made it off the island. The bird did have a solid foothold on it's ecosystem. When that ecosystem changed it, like many others have to currently deal with non-native invasive species had a very rough go of it.

      So, there are millions of species on our planet, and I think we should study and catalog all of them. But let's also acknowledge the fact that no matter what we do, 99.9% of those species are going to be evolutionary dead ends.
      On a sufficiently large enough time scale sure. But it is very short sighted of us to not give them all a chance anyway. What if the next plant that we wipe out holds the cure to cancer, what if the next vole shows the evolution of the bat, what if the next sapling cut down would have (in that sufficiently large enough time scale) have led to the rise of a group to rival the angiosperms in thier variety and vitality. It is not just that humans cause extinctions (You're welcome ;)) Its that we are causing them at the greatest rate since any of the mass exticion events that have happened on the planet. All that it takes is a very little bit of care and we humans seem to think that we are the most special of the species and don't have to care.

      Here are two closing thoughts for you. What is the most successful Genus on the planet? The knee jerk reaction is humans. No, not at all. The most successful is one of the Grass genera (take your pick) not only to they outnumber Humans by orders of magnitude but they have evolved and obligate parasite (us). Second I leave you with the words of my Taxonomy professor. "It is theoretically impossible to identify a species of a living set of creatures, for everything is constantly evolving, and what is not identifiable as a species today may be tomorrow. Truly the only way to identify a species is when they are all gone. So truth be told, mankind have been the greatest producer of species in the history of the World. " A true statement, and one that ruffles the feathers of biologists.It does not however mean that we shouldn't care about "making more species"

      Sera

      --
      Slashdot, where armchair scientists get shouted down and armchair theologians get modded up.
    3. Re:On Extinction by Concerned+Onlooker · · Score: 1
      We have to balance environmentalism with a healthy dose of logic.

      Uh-oh, look out. Here comes "logic," which really means "you're an idiot if you don't see things my way."

      I just finished reading Bill Bryson's excellent book, A Short History of Nearly Everything.

      Then you might also try reading "Song of the Dodo," by David Quammen. In it Quammen details incidents just such as this, which are all really about the topic of island bio-geography. You'll realize that the bird hadn't "failed to evolve a solid foothold in its ecosystem." Rather, it had adapted quite well to its environment after its ancestors made the trip over from the mainland. And in the space of a year (by your story) the species was wiped out.

      This isn't limited to this one bird species, however. It's been repeated by man so many times in the last few hundred years that even a fool will start to notice that we're having a deletrious effect on our planet. The point isn't just that we're "crying over extinct species," although a thoughtful and human person would reflect on that. The point is that we're affecting our habitat when we do that.

      But let's also acknowledge the fact that no matter what we do, 99.9% of those species are going to be evolutionary dead ends.

      One of those "dead ends" might just end up being us.

      --
      http://www.rootstrikers.org/
  8. Major species missing? by EvilIdler · · Score: 1

    I noticed they actually had an entry for homo sapiens, which is better
    than many books of that sort remember. That puts it one step ahead
    of print already :)

  9. Big by Anonymous Coward · · Score: 0

    Noah's Ark must have been really big to fit all of them. Just a testament to God's great power.

  10. Uhh, LINK?! by Palshife · · Score: 2, Insightful

    An online catalogue of all known life on Earth now has half a million species in its freely available database.

    That's awesome. ...

    WHERE THE HELL IS IT?!

    --
    Attention deficit disorder is a complicated issue, spanning several major... HEY LET'S GO RIDE BIKES!
    1. Re:Uhh, LINK?! by Anonymous Coward · · Score: 0

      An online catalogue of all known life on Earth now has half a million species in its freely available database.

      An online catalogue? Does it accept paypal so I can order some species?
  11. last? by WalterGR · · Score: 1

    last post!

    (Why hasn't this caught on?)

  12. How would you know? by cuteseal · · Score: 1
    "But there may be anywhere between 3 million and 12 million more yet to be discovered"

    How do one come up with a figure like that about something one doesn't know? :D

  13. Re:I find it sad but true by Anonymous Coward · · Score: 0

    Don't worry. At the rate new Bush Administration policies on the environment are kicking into effect, not to mention similar policies by virtually every other corporate government on the planet, vast majority of the species will go extinct long before we discover any extraterrestrial ones.

    The sad truth is that such cataloging projects are now just a vain madness associated with the empty hope of a future for humanity. No wonder the banality of religion is quite the rage these days.

    Bacteria will rule in the end as they did for eons. The "human" era seems destined to wink out in geological time, in keeping with natural extinction rates in the fossil record.

  14. Re:I don't mean to be rude but... by Anonymous Coward · · Score: 0

    Where on earth did your "taxonomy" professor come up with such garbage. While species are only cognizable combination of interbreeding individuals that can be diagnoses as having strong phenotypic and ultimately genetic modal variation, one can hardly conclude from this that humans are somehow "the greatest producer of species in the history of the world".

    I don't want to burst your fantasy but we are now living in the greatest period of extinction in the history of the planet. If we are creating species, they are most likely bacterial in nature and its anybody's guess as to whether many of these species will survive us, once the slag piles, garbage pits, and waste ponds disappear with our own extinction.

    Judging from the level of intelligence displayed in discussing this topic, I guess I must perhaps express a sigh of relief that its just as well we will be winking out in the short term.

  15. Re:Being alone? by Anonymous Coward · · Score: 0

    It boggle the mind how you feel you are alone, when most of the more familiar species are so genetetically like you, yet you won't feel alone when you find an extraterrestial life form that will certainly have evolved totally independent of you and share NO genetic relation.

    None of this will change people's religion as religion is not based on reality or reason, its based mostly on the fear of death and the politics of castigation. People are certainly not about to give that up for ET.

    The reason we need to study species is simply put to survive. We are not independent of other species and simply can not survive without them. If you doubt it, then just stop breathing the oxygen produced by millions of years of photosynthesis by alga and higher plants (most of which are now at measurable risk of extinction from antropogenic activity).

  16. ReBy studying them by Anonymous Coward · · Score: 0

    Such calcuations can be made by taking into account how many you already know about for a given studied area and then examining the rate at which new ones are being discovered.

    If you familiarize yourself with assymptotic functions, then it will become clear to you as to how this can be done. It is a question of establishing an asymptote, by making assumptions about the rate at which the assymptote is reached. Ones assumptions are bounded by the the number of species that are known and the rate at which new ones are becoming known, which are both "known" (or at least observable).

  17. Re:You won't be flamed by Anonymous Coward · · Score: 0

    Don't worry you won't be flammed. You just show your ignorance of the natural world. There is no natural law that says that species extinction is balanced by species origination. Indeedd there are numerous periods of earth history in which there have been dramatic declines and increases in the number of known species. Presently, we are in the greatest period of decline ever recorded and its likely to be nearly all the way downhill from here, as eventually our spew finally pollutes the oceans to the point that they no longer support photosynthesis.

    I might hasten to point out, however, that it is precisely such ignorance that assures humanity that we will almost certainly be among the 99.9% (actually it may be closer to 90-95%, if you make assumptions regarding bacterial immortality) of the species that WILL go extinct.

    However, don't accept this judgement as too harsh, as even if most of us act like saints, the few bad apples will almost certainly spoil the barrel anyway. It only takes a few Hitlers, Stalins, Saddams and Bushes to really screw things up.