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Most Science Studies Tainted by Sloppy Analysis

mlimber writes "The Wall Street Journal has a sobering piece describing the research of medical scholar John Ioannidis, who showed that in many peer-reviewed research papers 'most published research findings are wrong.' The article continues: 'These flawed findings, for the most part, stem not from fraud or formal misconduct, but from more mundane misbehavior: miscalculation, poor study design or self-serving data analysis. [...] To root out mistakes, scientists rely on each other to be vigilant. Even so, findings too rarely are checked by others or independently replicated. Retractions, while more common, are still relatively infrequent. Findings that have been refuted can linger in the scientific literature for years to be cited unwittingly by other researchers, compounding the errors.'"

5 of 252 comments (clear)

  1. Re:Medical research vs. basic research by brteag00 · · Score: 5, Interesting

    It's not just medical research. The scientific community works like any other community: the greater the implications, the greater the scrutiny, attempts to replicate, etc. The Huang embryonic stem cell study is a great case-in-point: the image-manipulation fraud was uncovered because of the vast number of researchers looking at the micrographs he published. (That sounds familiar, doesn't it: "Many eyes make all bugs shallow.") Global warming has many, many people working on models, taking ice cores, doing other analysis. Of course, the vast majority of published research isn't reported in Science or Nature, and so it doesn't get as much exposure. That's why around here (the University of Wisconsin), it's standard practice that if your work depends on someone else's result, you first replicate her experiment and make sure you get the same result. (If you can't, you write a letter to the appropriate publication making note of your inability to replicate the result.) This means that eventually the mistake gets uncovered, and your research doesn't get burned because someone else has been sloppy.

  2. strong variation with fields by call+-151 · · Score: 3, Interesting
    There are a lot of different attitudes about the role of the anonymous referee, in different fields and in different settings. In computer science and mathematics, where most of my publications are, the role of the referee depends upon a number of things. A few comments relevant to my disciplines:

    • The responsibility for correctness lies with the author, not the referee. It is good if the referee spots problems but it is not the obligation of the referee to certify that every last detail is correct.
    • Often, the primary responsibility of the referee is to comment on the importance, priority, relevance and how much interest there is in the work.
    • In the CS world of conference refereeing (as opposed to CS journals) there is often absurd time pressure. Articles/abstracts are due at midnight local time on some date, so things are typically hastily written, and referees must review things in a very short timeframe and practically never get a chance to check things carefully. As far as I am concerned, the conference publication model in CS is terribly broken. There have been some calls for reform, but those have been coming for at least the last 10 years or so and over that period it's gotten worse, not better.
    • In math, it can take a year for a referee to work through something techical, so the process is slow.
    • Typically, referees are uncompensated for their work. Some people take their refereeing duties seriously, and some do not. Generally, those who do a good job in a timely fashion are asked more often to referee more things, which is not exactly a reward.

    --
    It's psychosomatic. You need a lobotomy. I'll get a saw.
  3. PhD != Research Scientist by rumblin'rabbit · · Score: 3, Interesting

    Universities are pumping out PhD's at a prodigious rate. As a manager of R&D, I've interviewed and hired more than my share. Virtually all say they want to do research.

    Here's my problem. Only a fraction (I'm guessing 1 out of 5) are actually capable of doing good research. The rest are competent employees for developing other people's research into useful products, but aren't terribly original thinkers, nor show a lot of initiative, nor show the rigour and clarity of thought one wants to see in a researcher.

    Frankly, when I "unleash" employees on open-ended problems without much guidance, the majority soon begin to flounder.

    There is nothing wrong with getting advanced degrees, but many then feel they are obliged to do original research when in fact they really aren't up to it. This may be one reason why the quality of papers isn't where it should be.

  4. Uncomfortably close to the truth by Mutatis+Mutandis · · Score: 3, Interesting

    I have worked in a biotech / pharmaceutical environment for over five years now, and I don't trust the average medical researcher or biologist to accurately calculate the weight of a kilogram of stuff. I would say that their data analysis is habitually poor, if I were not convinced that it is actually habitually awful.

    I have been trying to change this for five years. My success in this has been such that it contributed strongly to my recent decision to start searching for another job. The reality is that biomedical researchers simply do not believe in doing mathematical analysis of data properly. They consider it an eccentric habit, forgivable but socially objectionable, like smoking. By common consensus, it is considered much too complicated to expect that any of them can be expected to understand. Your average biologist is innumerate to the nth degree, and proud of it.

    I blame their education, which seems to stress naive and antediluvian (excuse the word) analysis practices, if at all. I have seen course materials which in their expression of basic mathematical formulas, betrayed that they had been left unchanged since the days when people used slide rules and logarithmic tables for calculations. Most of their other training is strictly qualitatively, not quantitatively, and focussed more on memorizing that on understanding.

    If necessary, they will find a crutch to help themselves to stumble along: Find a paper that defines a formula that looks relevant, and then fill in the numbers. They would not bother doing their own analysis, or trying to understand how the calculation works or whether it is relevant at all. The notion that a good statistical analysis of mathematical modeling can actually contribute to the scientific understanding of an issue, is well beyond most of them.

    I am frankly, sick and tired of their attitude, and I still have to work with these people every day. And in my experience, my colleagues are actually better than most. I strongly suspect the WSJ is correct on this one.

  5. "Do Scientists Cheat?" by Jerry · · Score: 3, Interesting

    That was the title of a NOVA film in 1998.

    `Abstract: This video examines the troubling question of scientific fraud: How prevalent is it? Who
    commits it? And what happens when the perpetrators are caught? Factors contributing to "bad science"
    include sloppy research, personal bias, lack of objectivity, "cooking and trimming", "publish or perish"
    pressure, and outright fraud. The limits of peer review and other quality control systems are discussed.'

    The results of the study determined that 48% of all published data was fraudulent. The data was trimmed, cooked or outright falsified. Some cases made famous by public exposure were analyzed.

    While recieving a lot of lip service from the establishment science, the two government researchers who made the report were reassigned to worthless tasks in isolated areas. One was sent to shuffle papers in Alaska, IIRC. So much for whistle blowers, even government whistle blowers.

    In the last 19 years it seems nothing has changed. Besides this latest report how can I tell? Simple. The news is filled with stories of drugs being recalled because they are more dangerous that the problems they are supposed to treat. How would they ever have gotten on the market in the first place if their FDA "studies" weren't rigged? And you don't wonder about the revolving door policy between Pharmaceutical employees and FDA employees? Corporate influence in research is as corrupting as Microsoft influence in ISO standards voting.

    What really burns me is that MUCH of our basic research is done at academic institutions by professors funded by government grants, i.e., tax payers. But, thanks to the best congress that money can buy (because most of them have been bought off) OUR research is "monetized" (sold to special interests) for pennies on the dollar. These interests then reap HUGE license profits for decades. To make matters worse, many of the "special interests" are the very academic researchers who were paid to do their work. Having discovered key facts, without reporting them, they resign academia and begin a corporation to capitalize on what we paid them to learn.

    IF we had a congress worth what they are paid there would be a law which prohibits recipients of gov grants, or their families relatives, or former business associates to personally benefit from what they learned using that grant money for a period of 15 years. Secondly, the ONLY corporations which should be allowed to receive IP licenses from the gov should be NON-PROFITS, whose board, management or employees cannot include the professor or his family or relatives.

    Another thing that this recent study shows is what the NOVA film revealed: Peer-review is worthless for vetting research. Replication is worthless for vetting research. Obviously, personal integrity is also a worthless indicator of research quality.

    --

    Running with Linux for over 20 years!