Inside Tsubame, Japan's GPU-Based Supercomputer
Startled Hippo writes "Japan's Tsubame supercomputer was ranked 29th-fastest in the world in the latest Top 500 ranking with a speed of 77.48T Flops (floating point operations per second) on the industry-standard Linpack benchmark. Why is it so special? It uses NVIDIA GPUs. Tsubame includes hundreds of graphics processors of the same type used in consumer PCs, working alongside CPUs in a mixed environment that some say is a model for future supercomputers serving disciplines like material chemistry." Unlike the GPU-based Tesla, Tsubame definitely won't be mistaken for a personal computer.
You may want to read the article again, if not here's a recap:
655 Sun Boxes each with 16 AMD cores=10,480 CPU cores
680 Tesla Cards each with 240 processors=163,2000 GPU processors
As for how to use the GPU's, I use my GTX280 (almost same thing as Tesla) to crunch through lots of numeric calculations in parallel. I'm sure these guys are doing the same thing as that is the strength of the GPU. NVIDIA has made it easier to access the processing power of the GPU with CUDA. You create a program in C that gets loaded on the GPU and when you launch it you can tell it how many copies to run at one time, each one typically operates on a different portion of the data. Because you can launch more threads than there are processors, the GPU can be reading data in from global vid mem while other threads are performing calculations.