Slashdot Mirror


Craig Venter Wants To Rebuild Martian Life In Earth Lab

Hugh Pickens writes "Karen Kaplan reports in the LA Times that Craig Venter is making plans to send a DNA sequencer to Mars. Assuming there is DNA to be found on the Red Planet – a big assumption, to be sure – the sequencer will decode its DNA, beam it back to Earth, put those genetic instructions into a cell and then boot up a Martian life form in a biosecure lab. Venter's 'biological teleporter' (as he dubbed it) would dig under the surface for samples to sequence. If they find anything, 'it would take only 4.3 minutes to get the Martians back to Earth,' says Venter, founder of Celera Genomics and the Institute for Genomic Research (TIGR). 'Now we can rebuild the Martians in a P4 spacesuit lab.' It may sound far-fetched, but the notion of equipping a future Mars rover to sequence the DNA isn't so crazy, and Venter isn't the only one looking for Martian DNA. MIT research scientist Christopher Carr is part of a group that's 'building a a miniature RNA/DNA sequencer to search for life beyond Earth,' according to the MIT website 'The Search for Extra-Terrestrial Genomes.' SETG will test the hypothesis that life on Mars, if it exists, shares a common ancestor with life on Earth. Carr told Tech Review that one of the biggest challenges is shrinking Ion Torrent's 30-kilogram machine down to a mere 3 kg – light enough to fit on a Mars rover."

20 of 142 comments (clear)

  1. Needs to read more SF by petes_PoV · · Score: 2
    Hasn't the guy read A forAndromeda?

    We know what dangers this sort of thing can lead to

    --
    politicians are like babies' nappies: they should both be changed regularly and for the same reasons
  2. DNA is an Earth-specific coincidence by Anonymous Coward · · Score: 2, Insightful

    It is completely ridiculous to think that life on Mars would use "DNA" and even "cells." Both are just coincidences of life on earth. There are an infinity of different ways to encode genetic information and assemble living organisms. Did these people also write the scene in Independence Day where Jeff Goldblum takes over the alien computer with his Mac?

    1. Re:DNA is an Earth-specific coincidence by History's+Coming+To · · Score: 3, Interesting

      That's the big question - is it a coincidence? It's entirely possible that, just as the CNO cycle is a common method of fusion in stars, that DNA, RNA or close analogues (eg Si or As based) are common ways of producing self-replicating molecules. We've only got a single data point, any speculation on the molecular basis of ET life is just that, pure speculation, until we have a second point.

      --
      Please consider this account deleted, I just can't be bothered with the spam anymore.
    2. Re:DNA is an Earth-specific coincidence by the+gnat · · Score: 2

      There are an infinity of different ways to encode genetic information and assemble living organisms.

      False - there are a finite number of stable elements, and a finite number of possible covalent chemistries. Moreover, while it is in theory possible for other types of biochemistry to exist, it is most probable that life on Mars would follow similar rules to life on Earth, i.e. CNOH-based chemistry. (Additionally, as another commenter pointed out, we have no evidence for other mechanisms.) What Venter hasn't made clear in any of the articles I've read is whether he expects that any Martian life would share a common ancestor with Earth life. If he isn't operating on this assumption, than two other assumptions fall apart: a) that the structure of Martian genetic material would be so similar as to permit DNA sequencing, and b) that the resulting sequence would be interpretable in the same way as Earth DNA, to the point of being able to reconstruct a cell. The latter point in particular is simply insane if you assume independent origins.

    3. Re:DNA is an Earth-specific coincidence by Samantha+Wright · · Score: 3, Informative

      It's not as flexible as you might think. We have reason to believe that ribose and the nucleotides are inherently more common in the universe, and the chemical behaviour of DNA and RNA both are extremely convenient and flexible by comparison with the alternatives we've synthesized. These are artefacts of quantum physics, universal constants, and how stars die. If the universe is an experiment designed to see what conditions cause life to arise, current astrophysics would posit that we are about as standard as it gets.

      The same goes for enclosing the self-replicating material in a membrane made out of lipids: some propose that the presence of lipids was required for life to start in the first place. Without some kind of solvent-filled (i.e. water-filled or ammonia-filled) cell, the only way to protect sensitive inner workings from the outside is by having a thick layer of solid material with no flexibility, which is extremely bad for evolution.

      Moreover, a lot of the theories about life on Mars depend on it either (a) being cognate with life on Earth (perhaps even the cradle), or (b) having a comparable biosphere to Earth's billions of years ago. And that's without considering panspermia. Given that it's from roughly the same mix of nebula as Earth, we've already got a lot in common.

      That all being said, however, Venter is once again vastly overambitious. 'Booting up' synthetic chromosomes only works in sufficiently similar chassis, and for very simple organisms (true Martian life would be radically different in terms of cell configuration and structure); an environmental sample of Ion Torrent reads is most likely not sufficient to clearly resolve specific genomes; any life on Mars is not likely to be near the surface within a rover's reach; any life near the rover's reach is probably a Terran contaminant. If anything comes out of this, it will be a new upper bound on "how many people can roll their eyes at Craig Venter."

      --
      Bio questions? Ask me to start a Q&A journal. Computer analogies available for most topics!
    4. Re:DNA is an Earth-specific coincidence by Samantha+Wright · · Score: 4, Insightful

      We're not that blind. We can study the chemical fitness of different atoms by looking at the amount of energy it takes them to undergo various chemical reactions versus other counterparts. Silicon, despite science fiction's love for it, is an extremely inflexible atom: it can't form bonds with any of the major non-metals we use (oxygen, nitrogen, sulphur, and phosphorus), and it can't form bonds with a number of the coordinating metal ions we use, either. You may say "oh, well, it can just use other stuff and have a big ol' alternative party," but there aren't many alternatives. Carbon is useful not only because it forms many bonds, but because it can form them with these atoms in particular, which are biochemically equivalent to tools. No tools, no catalyst, no enzyme, no metabolism, no life.

      If I were a god-fearing scientist, I would tell you that we live in an experiment designed to see how frequently RNA, DNA, and polypeptide-based life evolves. (And I'm starting to worry I may eventually become one, simply because of how perfectly our biochemistry falls out of the periodic table. If there is an alternative way of doing things, it's not something obvious like swapping out one chemical.)

      --
      Bio questions? Ask me to start a Q&A journal. Computer analogies available for most topics!
    5. Re:DNA is an Earth-specific coincidence by MightyMartian · · Score: 2

      I think some sort of cell would be common to most life. It's difficult to imagine how advanced life could evolve without some sort of semi-permeable membrane.

      --
      The world's burning. Moped Jesus spotted on I50. Details at 11.
    6. Re:DNA is an Earth-specific coincidence by StripedCow · · Score: 3, Insightful

      If I were a god-fearing scientist, I would tell you that we live in an experiment designed to see how frequently RNA, DNA, and polypeptide-based life evolves.

      Nah, the experiment is about creating silicon life. The hydrogens, carbons, nitrogens, oxygens and phosphors are merely catalysts.

      --
      If Pandora's box is destined to be opened, *I* want to be the one to open it.
    7. Re:DNA is an Earth-specific coincidence by Velex · · Score: 4, Insightful

      You'll also note that if things didn't work out so perfectly, you wouldn't be here to invent god.

      How did god evolve? Where did god come from? Why does god exist? Watches don't self-assemble or evolve from grandfather clocks; a watch implies a watchmaker. A being with the power to precisely calculate an asymmetrical space-time manifold where physical laws can come into being that allow something like stars and galaxies to even work must be much more complex than a watch. Who is god's watchmaker?

      But as we know it was probably four elephants on the back of a turtle, and then it's a sequence of turtles, each more elaborate than the last to be the watchmaker for the next turtle.

      Religion is fun and all until somebody gets hurt. I don't know where things are going with the religious right, but just keep in mind that if religion tells you that the only way to avoid hell and go to heaven is to kill somebody like me, that person might just be carrying concealed.

      Probably best to stick to the real world. Fewer people get killed and fewer families get torn apart when there aren't sky wizards involved.

      --
      Join the Slashcott! Stay away entirely Feb 10 thru Feb 17! Close all tabs to prevent autorefresh!
    8. Re:DNA is an Earth-specific coincidence by Samantha+Wright · · Score: 2

      O-ho. :) I see what you did there.

      --
      Bio questions? Ask me to start a Q&A journal. Computer analogies available for most topics!
  3. DNA Half-life by Anonymous Coward · · Score: 4, Insightful

    Except the half-life of DNA is only 521 years. I don't know, but I would be highly skeptical of there having been life on the planet within that time period.

  4. Let's just kill this idea with science right now. by Dzimas · · Score: 4, Insightful

    Morten et al recently examined DNA in 158 bone fossils and determined the half-life of DNA to be 521 years in their sample. Even if Martian DNA functioned in the same manner, the idea that environmental conditions on Mars were suitable to sustain life as late as the year 1491 is ludicrous. http://rspb.royalsocietypublishing.org/content/early/2012/10/05/rspb.2012.1745.abstract?sid=abb89d94-00f1-431b-8863-c62996e35478

  5. What could possibly go wrong? by Hognoxious · · Score: 2

    What could possibly go wrong?

    P.S. UUULLLAAAAAA

    --
    Confucius say, "Find worm in apple - bad. Find half a worm - worse."
  6. The program is useless without the CPU by hmbcarol · · Score: 3, Interesting

    Having the exact stream of bytes of an ARM program will do you no good if you place it in an x86 CPU and expect it to run. Or even one variant of an ARM to another with different I/O, timers, etc. Simply transferring entire genomes between far distant organisms on Earth won't work. When the organisms are distant enough from each other there is variance in the code itself (stop codons, etc) and the machinery the specific code will be manipulating must be there to be controlled. Ribosomes vary, organelles certainly vary. In fact it's rather presumptive of us to assume the genetic mechanism must be DNA or RNA when there are probably all sorts of other mechanisms that would work suitably. Even presuming life had a common origin and there was some event that seeded Mars with Earth bacteria (or the other way around) a few billion years ago, doesn't mean there is the slightest chance it's in any way compatible with anything that could be found on Earth today. Very different environments will select for very implementations over those billions of years.

  7. dumb by slashmydots · · Score: 3, Insightful

    Yeah, with little if any magnetic field and barely any atmosphere so tons of radiation reaching the surface, and an unlikely chance that alien life has DNA as we know it, that sounds like a great idea.

  8. Mission Briefing by thygate · · Score: 2

    Bring back sample at any cost. Quarantine LT. Ripley Crew Expendable

  9. Re:Let's just kill this idea with science right no by slashping · · Score: 2

    Sure, but even if you assume a half life of 10,000 years, there's not going to be much left after a few billion years. And Mars looks like a nasty place for DNA to survive, so it's more likely that 521 years is overly optimistic.

  10. Send it to Enceladus instead by Ranger · · Score: 2

    We've been exploring Mars for 40+ years now and so far we've not found evidence of life. We are much closer answering the question if it did or does, and I won't be surprised if we find microfossils and even life, but the parameters are very narrow. Now if we send a DNA sequencer to a icy moon of Jupiter or Saturn that has an ocean under it's ice, the odds of finding life go up dramatically. Europa would have been my first choice but we have to get through that thick crust. Enceladus would be even better. It's spewing liquid water into space. So we know where the crust is thinnest. And it does have the ingredients for life.

    --
    "You'll get nothing, and you'll like it!"
  11. Re:What about my wants? by Stirling+Newberry · · Score: 2

    Make a lot of money and you are an eccentric visionary. Until then, you are just a frustrated nerd.

  12. Re:Let's just kill this idea with science right no by SecurityGuy · · Score: 2

    Less atmosphere would mean more radiation, so if anything, the DNA would degrade faster.