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Hidden Viral Gene Discovered In GMO Crops

Jeremiah Cornelius writes "Researchers with the European Food Safety Authority discovered variants of the Cauliflower mosaic virus 35S in the most widely harvested varieties of genetically-modified crops, including Monsanto's RoundupReady Soy and Maze. According to the researchers, Podevin and du Jardin, the particular 'Gene VI' is responsible for a number of possible consequences that could affect human health, including inhibition of RNA silencing and production of proteins with known toxicity. The EFSA is endorsing 'retrospective risk assessment' of CaMV promoter and its Gene VI sequences — in an attempt to give it a clean bill of health. It is unknown if the presence of the hidden viral genes were the result of laboratory contamination or a possible recombinant product of the resultant organism. There are serious implications for the production of GMO for foodstuffs, given either possibility."

64 of 391 comments (clear)

  1. Anything that screws monsanto by shaitand · · Score: 5, Insightful

    Can't be all bad.

    1. Re:Anything that screws monsanto by eksith · · Score: 4, Insightful

      ...Will also screw those eating their products. Please resist the temptation to treat this so light-heartedly as just another case of hubris. These things affect not just one or two lives, but entire communities and even a couple of generations.

      --
      If computers were people, I'd be a misanthrope.
    2. Re:Anything that screws monsanto by nrasch · · Score: 5, Interesting

      ...Will also screw those eating their products. Please resist the temptation to treat this so light-heartedly as just another case of hubris. These things affect not just one or two lives, but entire communities and even a couple of generations.

      Oh I wouldn't worry about the light-heated treatment of hubris. I'm sure Monsanto will pull of bunch of political strings, make some key campaign donations, and this whole thing will be forgotten. Maybe you forgot how things work here in the USA....

      In the meantime, be sure to stock up on corn and soy products!

    3. Re:Anything that screws monsanto by bistromath007 · · Score: 3, Insightful

      Actually, anything that screws Monsanto will greatly benefit the communities eating their products taking any view longer than about a week and a half. If there is any corp that can be rightly described as pure evil far beyond what is necessary to just make a profit, it's that one.

    4. Re:Anything that screws monsanto by fredgiblet · · Score: 3, Insightful

      Actually there's plenty of food in the world. The poblem is that large parts of it can't pay enough for us to bother getting it to them.

    5. Re:Anything that screws monsanto by Beardo+the+Bearded · · Score: 4, Insightful

      By placing this virus into Monsanto's Family-Friendly (TM) products, we ensure that a robust resistance to viruses is present not only in our corn, but in the very bodies of the children you love -- and Monsanto love -- so dearly. We've shown that this genetic profile is safe in the lab, safe in the field, and safe in the human body.

      Monsanto. Family Friendly. (TM)

      *eagles*

      --

      ---
      ECHELON is a government program to find words like bomb, jihad, plutonium, assassinate, and anarchy.
    6. Re:Anything that screws monsanto by ColdWetDog · · Score: 2, Insightful

      WTF are you about? GM crops are not going to help 'feed the world'. Places that are having food shortages suffer from poor soil, lack of water, poor infrastructure and little money. GM crops don't answer any of those issues.

      Kool Aid, especially in large quantities, is harmful to higher cognitive functions.

      --
      Faster! Faster! Faster would be better!
    7. Re:Anything that screws monsanto by poetmatt · · Score: 4, Insightful

      allowing monsanto to exist has *already* screwed us. Getting rid of them will simply get us past the hump of all the problems and shit they brought about in the first place. If you think we're living because of monsanto crops, you're mistaken. sustainable solutions (and life as we know it) has existed for thousands and thousands of years without them.

    8. Re:Anything that screws monsanto by Will.Woodhull · · Score: 5, Interesting

      Wrong.

      There are more than enough foods produced world wide to feed everybody. There is no effective way to gather the excess of one region and distribute it to those in need in another region.

      Further, the monoculture approach that is used with GM crops damages good farm land. Monsanto's fix for that, involving the increased use of petroleum based pesticides and fertilizers, completes the destruction of the damaged soils. As a farmer once told me almost 50 years ago, "All they use the dirt for is to hold the stalks up." Things have gotten worse since his day.

      Monsanto's approach is not a sustainable agriculture.

      --
      Will
    9. Re:Anything that screws monsanto by mattack2 · · Score: 2

      As Sam Kinison said: go WHERE THE FOOD IS!

    10. Re:Anything that screws monsanto by raftpeople · · Score: 4, Insightful

      Not so fast my friend. Are you aware that there has been a consistent and dedicated effort by scientists to breed/evolve rice for the last 50 years to increase production and the number of areas it can grow? And that without this effort rice production would not have kept up with worldwide demand?

      GM crops can certainly play a part in continuing to keep up with demand.

    11. Re:Anything that screws monsanto by Toonol · · Score: 4, Insightful

      He's just overly enthusiastic. The anti-GMO environmentalists don't want those people to starve; they just care more about banning GMO than saving those people.

    12. Re:Anything that screws monsanto by westlake · · Score: 3, Insightful

      WTF are you about? GM crops are not going to help 'feed the world'. Places that are having food shortages suffer from poor soil, lack of water, poor infrastructure and little money. GM crops don't answer any of those issues.

      Seems to me that engineering a plant that needs minimal care and performs well under harsh conditions would be a perfectly sensible way to proceed. It is, after all, a strategy that the geek has applauded under other circumstances --- deep space exploration, the colonization of Mars and so on.

    13. Re:Anything that screws monsanto by Anonymous Coward · · Score: 2, Insightful

      Actually, I think this is something we can lay at the feet of American and European farm subsidies. African farmers can't compete with subsidised staples from the US and Europe, so they have to instead focus on cash crops. If the US and France were to give up on farm subsidies, African farmers could actually grow food crops locally.

    14. Re:Anything that screws monsanto by ChromeAeonium · · Score: 2, Informative

      GM crops are not going to help 'feed the world'.

      In the 1990's, the Hawaiian papaya industry was crashing. Papaya ringspot virus was kicking ass. If you got it, you were pretty much screwed. you options were grow something else or kill off the infected plants and everything around them and pray for the best. Then along came the Rainbow papaya. It was genetically engineered to resist the virus, and it did just that. The industry was able to recover. Now, that's just a fruit for the market in developed countries, but what if that were a virus of cassava or banana, staple crops in developing countries? Can genetic engineering end world hunger? No, no single thing will do that. But you have to turn a real blind eye to a lot of facts to say that it can't and won't be part of the solution.

    15. Re:Anything that screws monsanto by ChromeAeonium · · Score: 2, Informative

      It seems to me that Monsanto crops are designed to sell more Monsanto chemicals

      Monsanto sells four types of GE crop: Bt crops, Round-Up Ready crops, virus resistant crops (well, crop, only squash has this trait), and drought tolerant crops. Two of those four have nothing to do with chemical inputs, one reduces the need for insecticides, and the active ingredient of Round-Up is no longer patented so you can buy it from anyone.

      For many years GMO researchers showed great results with new crops that had better qualities. But steadily those programs have disappeared

      You're right that there are a lot of very promising GE plant out there that we don't use, but that isn't Monsanto's doing. The problem is that the regulatory burden is so great that only large companies like Monsanto can get their crops to market. Then, ironically, the anti-GMO people push for tighter regulations, which only secure the big companies from competition!

      Monsanto is a schmuck company that preys on farmers, researchers and government in order to maintain it's monopoly.

      Monopoly? I guess Syngenta, Bayer CropScience, BASF, Pioneer HiBred, Dow AgroSciences, ect. don't exist then? And has it ever occurred to you that farmers willingly choose Monsanto because they like their seed?

  2. Is it in non GMO? by Anonymous Coward · · Score: 5, Interesting

    But is it found in non-GMO plants? We've seen latent genes from virii in many plants and animals.

    1. Re:Is it in non GMO? by Dahamma · · Score: 3, Interesting

      It's beyond that - a significant fraction of your DNA is fragments of virii. And a recombinant virus is the most common way of introducing new DNA for gene therapy.

      And further, this article is idiotic. The Caulilflower mosaic viral promoter is the most common mechanism for inserting genes into GMO, so of COURSE it's going to be present, that's common knowledge to anyone in the field. Now whether it's healthy or not is a different issue..

  3. The danger with GMO is what we don't know by kawabago · · Score: 3, Interesting

    The danger with GMO crops is what we don't know about gene splicing and the like. This is a prime example of my point. Despite all their supposed safe guards, genes with unknown potential have entered the food chain. This might be the next BSE in the food supply.

    1. Re:The danger with GMO is what we don't know by cervesaebraciator · · Score: 4, Insightful

      This is true of many things in life. It reminds me of a line from a Wendell Berry work which stuck with me, albeit not verbatim. It was something along the lines of, 'Wisdom is knowing what to do in state of ignorance.' His point was the technical knowledge we've accumulated can sometimes blind us to the possible consequences of our overwhelming ignorance in a complex universe, even as the same knowledge gives us ever greater ability to make those consequences worse.

      Even if such a thought doesn't stop someone from acting, if it gives them pause long enough to find a way to act more prudently, I think it good.

    2. Re:The danger with GMO is what we don't know by Will.Woodhull · · Score: 4, Insightful

      This would be useful advice for the scientists who control the delivery of GMO seed to farmers and agribusinessmen.

      Oh wait... the scientists don't do that. It is the bean counters and paper shufflers who make those contracts....

      GMO needs to be tightly regulated because there are too many levels where decisions are made by persons who don't have a fucking clue what their own long term best interests are. Let alone give a damn about what is best for anyone else.

      --
      Will
    3. Re:The danger with GMO is what we don't know by Dahamma · · Score: 4, Insightful

      Except, NO, it wasn't accidentally introduced, and anyone who is interested could have easily known this - it's even in the Wikipedia article for CMV!

      The promoter of the 35S RNA is a very strong constitutive promoter responsible for the transcription of the whole CaMV genome. It is well known for its use in plant transformation. It causes high levels of gene expression in dicot plants. However, it is less effective in monocots, especially in cereals. The differences in behavior are probably due to differences in quality and/or quantity of regulatory factors. The promoter was named CaMV 35S promoter ("35S promoter") because the coefficient of sedimentation of the viral transcript, whose expression is naturally driven by this promoter, is 35S. It is one of the most widely used, general-purpose constitutive promoters. It was discovered at the beginning of the 1980s, by Chua and collaborators at the Rockefeller University.

      This study basically just "discovered" something that has already been the basis of much of the research and industry around gene insertion in plants for 30 years. Wow.

    4. Re:The danger with GMO is what we don't know by fluffy99 · · Score: 2

      The danger with GMO crops is what we don't know about gene splicing and the like. This is a prime example of my point. Despite all their supposed safe guards, genes with unknown potential have entered the food chain. This might be the next BSE in the food supply.

      Not been paying too much attention have you? The GMO has _fragments_ of this virus, the purpose of which has been repeated over and over in this thread. It's also been pointed out a few times that the _entire_ virus is often found in non-GMO crops.

  4. Debunked by A+beautiful+mind · · Score: 5, Informative

    I'll just link to this post that explains what the news reports misunderstood. It contains quotes from the original authors of the study whose results are misrepresented here.

    --
    It takes a man to suffer ignorance and smile
    Be yourself no matter what they say
    1. Re:Debunked by MightyYar · · Score: 2

      My goodness, the Pottenger Cat Study? How is that an analog for human cooking? He fed them no taurine, and the cats can't make it themselves. Mystery solved.

      --
      W..w..W - Willy Waterloo washes Warren Wiggins who is washing Waldo Woo.
  5. The greedy are not trustworthy by Anonymous Coward · · Score: 3, Insightful

    If GMO is so safe, why do the food-industry fight so hard to avoid labelling the products?

    1. Re:The greedy are not trustworthy by fredgiblet · · Score: 2

      I'm not goign to take a side on whether or not it's safe. But there's a perfectly reasonable reason to avoid that. Two in fact.

      1: Monitoring which foods are and aren't GMO will cost money that they'd rather not spend.
      2: there's a lot of people who (correctly or incorrectly) fear GMO and thus sales would drop.

  6. The cool thing by Jafafa+Hots · · Score: 4, Funny

    is knowing I can grow an entire maze with just one seed.

    Is it one of them corn mazes?

    --
    This space available.
  7. Why was that viral gene inside in the first place? by Taco+Cowboy · · Score: 5, Interesting

    There are many questions one should ask:

    * 1. Why is that viral gene in there?

    * 2. Was it put there by accident or by purpose?

    * 2(a). If by accident, how, when, what happened?

    * 2(b). If by purpose, why, and by whom?

    * 3. How come the American scientists never detected this viral gene?

    * 3(a). Was it because of incompetence, or was it because the American scientists were not allowed to publish their finding, if they had found it before the Europeans?

    --
    Muchas Gracias, Señor Edward Snowden !
  8. Re:Anything that screws monsanto ? by icebike · · Score: 3, Informative

    ...Will also screw those eating their products.

    Seriously?

    According to the source linked by TFA:

    Multiple variants of the Cauliflower mosaic virus 35S promoter (P35S) are used to drive the expression of transgenes in genetically modified plants, for both research purposes and commercial applications.

    So, right away we learn that it wasn't a "hidden viral gene". Its known and expected that P35S would be present.

    A bioinformatic analysis was performed to assess the safety for human and animal health of putative translation products of gene VI overlapping P35S. No relevant similarity was identified between the putative peptides and known allergens and toxins, using different databases.

    So again, nothing that might be been produced (but in fact have not been seen - hence "putative") by this gene's presence was found.

    --
    Sig Battery depleted. Reverting to safe mode.
  9. Re:Is it also found in non-transgenic food? by Colonel+Korn · · Score: 2

    http://en.wikipedia.org/wiki/Cauliflower_mosaic_virus

    So yes, cauliflower mosaic virus with "a full length, terminally redundant 35S RNA" exists in normal cauliflower, too. Maybe TFA has some answers but TFS fails for not answering your question, which is the first thing any of us should be asking.

    --
    "I zero-index my hamsters" - Willtor (147206)
  10. Re:have any ill effects shown up? by Anonymous Coward · · Score: 2, Interesting

    There has been an increase in the last couple decades of gastrointestinal cancers affecting younger people. So, maybe. The cause(s) of this increase in GI cancer, among the young, has not been found yet.

  11. Know what you eat by WiiVault · · Score: 4, Insightful

    I'm not a tinfoil hat type who won't touch GMO because of any silly number of silly new age concerns or paranoid fantasies. But, that doesn't mean people don't have aright to know what they eat. Sure labeling won't solve problems like in TFA, but anything additional that informs consumers is a good thing. And knowing the potential pitfalls of different food choices should be a right. The current inability of shoppers in the US to know what foods are GMO means consumers have no choice. It also leads to suspicion and support to the luddite part of the anti-GMO crowd.

    Labeling is the first step to educating the public on GMOs and what they provides as well as potential impacts worldwide from GMO such as increased yield (with less chemicals) on one hand, and things like genetic diversity concerns and the role of seed/pesticide suppliers and patents on the other. The reason labeling here is so opposed by the industry isn't because of some conspiracy or concern that customers will decide to stop eating their product, or radically change their diet. Americans have known what we eat and its volume are deadly and McDonalds hasn't been shut down.

    Instead the reason behind non-labeling is to keep the status quo, labels on food mean questions, questions lead to competing information and the rise of the conspiracy theorist. Not having to label is just the path of least resistance. But keeping a few loud mouth idiots quiet isn't a good reason to not engage honestly with the public about a very profound change in the way we produce food, and quality to support a growing population.

  12. Re:Is it also found in non-transgenic food? by icebike · · Score: 5, Informative

    1) Yes: Multiple variants of the Cauliflower mosaic virus 35S promoter (P35S) are used to drive the expression of transgenes in genetically modified plants

    2) No its presence was not unexpected

    3) Its merely a tidbit of speculation:
    "putative translation products of gene VI overlapping P35S" were examined. (These have never been observed in the wild, they simply "Supposed them into being".) Upon Examining them they found "No relevant similarity was identified between the putative peptides and known allergens and toxins".

    Translation, These genes have sequences that might overlap to produce other "translations" (re-combinations).
    Nobody's ever seen it happen. So we had to use a computer.
    We speculated all the possible outcomes from such translations.
    We found nothing harmful.

    No film at 11. Nothing to see here folks.

    --
    Sig Battery depleted. Reverting to safe mode.
  13. This might be nothing to do with the GM. by robbak · · Score: 3, Informative

    Contamination of a organisms genetics with pieces of virus DNA happens in nature ALL THE TIME. It is only because this is a GMO crop that it was tested, and found.

    When the testing is finished, this may well be found to be a bit of perfectly natural, happened in the field, no-scientists-required genetic mangling.

    The only difference with GM is it is done in a carefully controlled manner with a known goal, and carefully tested to determine any unwanted side effects. Random, uncontrolled genetic modification, whose consequences are totally unknowable, is completely natural.

    As it is, one of the later posters linked to an article that actually looked at the research paper in question. It searched the known genomes for known toxic genomes, and found nothing. It found one possible thing that might be allergenic, looked at it further and ruled it out as well.

    In the end, they found a possible cause for a GMO to be less effective - stunted growth, late flowering - and concluded that this is something that geneticists should look out for.

    To finish, we have yet another study that shows how GM is completely safe. And how the media is totally untrustworthy when it comes to providing information. OH, and the article makes my point about natural virus proteins, too.

    --
    Prediction for end of Universe #42: Fencepost error in Quantum_bogosort.cpp
  14. A Modest Proposal by phage434 · · Score: 2

    The next obvious step is to label ALL food with the exact sequence of the plant/animal. Educated consumers will then easily be able to determine the safety and even the flavorfulness of their food. Don't like that pesky CMV promoter? Don't eat it. This is a much superior proposal to the worthless "GMO" label, that only tells you if some scientist did something (no telling what). And, you'll find out what all of those changes inserted with "natural" techniques involve -- most of which are far more "interesting" than the GMO modifications. Might take some space on the label, of course, but use a small font.

  15. Re:Why was that viral gene inside in the first pla by ColdWetDog · · Score: 3

    There are many questions that can be answered.

    In this particular case by reading The Fine Article.

    Even better, TFA can point out better questions with salient answers.

    Who knew?

    --
    Faster! Faster! Faster would be better!
  16. Hype, hype and more hype by Anonymous Coward · · Score: 5, Informative

    It's highly likely intentional. The CaMV 35s promoter sequence is widely used in transgenic plants to drive expression of the desired transgene.

    See:
    http://www.nature.com/nature/journal/v313/n6005/abs/313810a0.html
    http://europepmc.org/abstract/MED/17770331/reload=0;jsessionid=SY64O3k1HZ5Ld0j3FpKq.20
    http://www.ncbi.nlm.nih.gov/pmc/articles/PMC401147/

    To give a little bit of a simplified background, there are three critical elements in gene expression:
    PROMOTER
    TRANSCRIPTION FACTORS
    GENE
    PROTEIN

    The PROMOTER is a genetic sequence that comes UPSTREAM of a GENE which is recognized by TRANSCRIPTION FACTORS

    TRANSCRIPTION FACTORS bind to PROMOTER sequences and start the transcription of the GENE found downstream of the PROMOTER into mRNA

    The mRNA of the GENE is then transported out of the nucleus to ribosomes to be translated into functional PROTEIN products

    What the authors of this paper believed was that the sequence of the CaMV 35s promoter is similar to a viral protein used by many RNA viruses to protect their RNA from degradation (P6) so *IF* the CaMV promoter sequence itself is translated instead of the downstream gene (this is assumed to be possible, has not been observed) they hypothesized that it *MAY* have some functionality of the P6 protein. The odds of the CaMV promoter itself being translated into a protein are so remote that the possibility that it makes the (infinitesimal) odds that such a protein product would be functional seem astronomical be comparison. Furthermore, the authors never actually showed that the CaMV promoter is ever translated nor whether its translated product is functional, they merely compared the potential structure and sequence of the translated product to databases of known allergens and toxins and found.... nothing.

    What a load of FUD.

    1. Re:Hype, hype and more hype by sandytaru · · Score: 4, Informative

      They also incorrectly state that plant viruses commonly infect animals, which is not true. Plant viruses do frequently use insects as their vectors, but it's farm more common that any given bacteria will infect both a plant and animal alike than it is a virus. The insects who carry the viruses are generally not affected. Similarly, a human who ingests a cauliflower infected with the Cauliflower Mosaic Virus is probably not going to notice the difference.

      --
      Occasionally living proof of the Ballmer peak.
  17. Re:Why was that viral gene inside in the first pla by kelemvor4 · · Score: 2, Interesting

    1: Monsanto put it there
    2: On purpose
    2b: Monsanto put it there to control the world
    3: American scientists did not test the GM crops.
    3b: neither, the crops were untested.

    Actually, 1 and 2 are bullshit (most likely), but if you've followed the GM and anti GM saga (or just look it up) you'll find my answers to 3 and 3b are accurate.

  18. Re:I told you so. by flayzernax · · Score: 2

    You think you can fool this insane luddite with your scientific doublespeak? Its a shame people write so many papers that end in a "Maybe, with so many percents of probability".

    The paper says there's crap in the food. Most smart people understand this is not necessarily going to kill you.

    But there's still crap in the food. Even if the next step in the scientific process hasn't been taken yet to determine what probability it has of killing you.

    http://en.wikipedia.org/wiki/Francis_M._Pottenger,_Jr.#Meat_study
    While I agree that cats are not humans and the effects don't scale neccissarily because we've gone through some natural selection process with cooked foods. I think there is a lesser negative effect. The more bad shit we eat the more potentially bad end results. Industrializing the world has increased the population, but its created a proportional effect of suffering and death and B.S.

    I'm not going to tell you to get back to nature and live like predator from the aliens movies. But I am going to laugh my ass off while you and your descendants get cancer infested, sterile, and retarded and enslaved by Monsanto.

    Smart Luddites know slightly better and try not to consist on a diet consisting entirely of GMO produced corn chips. There's a reason for the story. You can't stop progress, but it can be tempered with some intelligent, intuitive, common sense.

    -your quaint /. luddite, at least since 2000 I know there's probably a few older ones out there.

  19. Re:Why was that viral gene inside in the first pla by Anonymous Coward · · Score: 5, Informative

    1. It's a part of a gene. It was cloned because of the promoter sequence that drives the expression of the transgene. (Viral promoters are very convinient - small but powerfull). Along with the promoter the transgenes carry a portion of a viral gene. Not sure why. Most likely because regulatory elements necessary for the promotor to work are embeded in the coding part.

    2. It is on purpose. They need it to drive the expression of the gene that they put into the plants.

    3. They didn't have to. They and everybody else new about it all along. I don't realy understand why it had to be "detected". It was there by design that is published in many research papers.

    The paper quoted in the summary is useless junk.

  20. Misrepresented Research: by Hartree · · Score: 3, Interesting

    Cauliflower mosaic virus infects various different plants that you eat (yes, even non-gmo "organically grown" ones) including turnips.

    You already get fully formed protein VI in any of them you eat that were infected. So, this isn't something new. We've been eating the protein they're upset about for millenia at least.

    The sequence for protein VI overlaps part of this 35S promoter that's used in some genetics work. It's not normally expressed (changed from DNA into the active protein) and in fact they couldn't find any evidence that it ever was.

    So, they asked the question "what if" this thing we never see happen did by some miracle happen. And when they did, they still couldn't find anything that looked dangerous. But, being scientists, they said they couldn't absolutely, completely, absitively and posolutely rule out any effects on the plants themselves.

    So, there you have it. The thing we never see happen, even if it did happen is the same as something that already happens all the time for the past millenia with no known ill effects.

  21. Re:Why was that viral gene inside in the first pla by structural_biologist · · Score: 5, Informative

    1. Why is that viral gene in there?

    When you insert a new gene (such as an herbicide resistance gene in Monsanto's Roundup Ready crops) into a plant, you also need to insert a piece of DNA called a promoter that tells the plant to turn the gene on. The scientists who created the GMOs chose to insert the promoter from the cauliflower mosaic virus (CaMV), as it is particularly good at this task and is very well studied. This promoter also happens to include part, but not the entirety, of gene VI from the virus.

    * 2. Was it put there by accident or by purpose? * 2(a). If by accident, how, when, what happened? * 2(b). If by purpose, why, and by whom?

    As stated above, the fragment of gene VI was placed into the GMOs on purpose. Because fragments of genes are generally inactive, the presence of the gene fragment is not expected to be problematic and showed no evidence of causing problems during the testing of the GMOs. Furthermore, because cauliflower mosaic virus is a naturally occurring virus, the full gene VI can be found in many non-GMO crops (for example, see this 2004 study).

    3. How come the American scientists never detected this viral gene? * 3(a). Was it because of incompetence, or was it because the American scientists were not allowed to publish their finding, if they had found it before the Europeans?

    These findings were not published before because we already knew that many GMOs contain a fragment of CaMV gene VI. In fact, in the Podevin and du Jardin study, the authors "found" the gene VI fragments by simply querying a database. A more substantial finding would have been if they found evidence that the gene VI fragments are actually made into functional protein (a prerequisite for the gene VI fragment to cause any deleterious effects), but this study did not investigate this issue. Rather, the study simply looked at what proteins might be produced in the worst case scenario and concluded that any possible proteins made from the gene VI fragments are unlikely to be human allergens or toxins. The authors speculate these possible proteins could be harmful to the plant itself, but because many of these GMOs are very productive plants that produce high yields in commercial settings, this possibility seems unlikely.

  22. Re:Why was that viral gene inside in the first pla by Mitchell314 · · Score: 2
    [astroturf mode="on"]

    1) Because a virus put it there. I'm no expert on the matter, but from my knowledge genetic engineering is usually done by isolating a desirable gene, replicating it in bacteria (or virus), then having a virus with the gene insert it into the target cell. Which then develops to a full blown organism with the new gene, hopefully. Of course, it's possible that the virus could have put other junk in there. I would like to point out that detecting viral DNA in any organism is by itself no cause for alarm. Hell, our own genomes are chalked full of garbage that viruses put there. Since that garbage doesn't really affect our survival or ability to reproduce, it hasn't been 'weeded' out. Same with plants.

    2)That is unknown, though unlikely on purpose. For one thing, genetic modification isn't an exact science. It is possible that the gene in question had nothing to do with a lab; Monsanto's crops come from controlled strains. As we know quite well, if there's a big genetic change in a population when it's bottlenecking, it could easily spread throughout the entire population, and retroviruses are capable of (and often do) inserting extra sequences in the genome. It probably was accidental lab contamination, or a bad reverse transcription that added more than the scientists expected.

    3) Now this is getting closer to the disciple I study and work for. First off, there is no table of contents in a cell that tells you what genes are present. And there is no label on a gene that says what it is, what it does, or even if it does something useful. Now, to put it into perspective, maize (corn) has about ~32,000 genes. All full of nothing but A's, C's, T's, and G's. So it's not something you can tell a couple interns to read through and report back if something doesn't look right. So this is a job for computer programs. That can run for up to days to finish. And require trained workers to both know to look for it, as well as actually look for it. Hence stuff like this is *very* *very* *VERY* easy to slip under the radar.

    [/astroturf]

    Not that I'm saying Monsanto is a nice hippy company with the well-being of society as its bottom line.

    --
    I read TFA and all I got was this lousy cookie
  23. Podevin and du Jardin by manu0601 · · Score: 2

    What wonderful names for researchers in agricultural field: Podevin translates from french into "pot of wine", and du Jardin translates into "of the garden"

  24. Re:Why was that viral gene inside in the first pla by Sentrion · · Score: 4, Insightful

    That's so true! It's just like the Cane Toad in Australia. It has been very effective at controlling pest insects on sugar cane fields ever since it was introduced in 1935, but the nay sayers are still convinced that the toads are an invasive species that are leading to severe breakdowns in Australian ecology. The nay sayers add to the hype by claiming that the cane toads are a nuissance to areas of human habitation, or even suggesting that there are risk of children or pets being poisoned from contact with toads.

    They complain about the imagined threat posed by innocent little toads, but will they admit that they would be willing to go back 80 years and raise cane without the toads? Who could possibly imagine such a world so primitive as to even attempt to raise cane without cane toads? It is totally preposterous! If they weren't growing cane, what else could they have possibly grown in Queensland?

    And a warning to those of us who support GMO with our hearts, souls, and wallets: They naysayers actually succeeded in getting the Australian government to ban importation of cane toads just after the initial release until a study could be completed to show that they were harmless. Fortunately for the industry, and the economy of Queensland, the ban was lifted in 1936. The danger posed by fearmongers who do not understand modern science and technology should not be under estimated. Just think - if the naysayers had their way, maybe there wouldn't even be ANY cane toads in Queensland today.

  25. Re:Why was that viral gene inside in the first pla by VortexCortex · · Score: 2, Funny

    There are many questions one should ask:

    * 1. Why is that viral gene in there?

    * 2. Was it put there by accident or by purpose?

    * 2(a). If by accident, how, when, what happened?

    * 2(b). If by purpose, why, and by whom?

    * 3. How come the American scientists never detected this viral gene?

    * 3(a). Was it because of incompetence, or was it because the American scientists were not allowed to publish their finding, if they had found it before the Europeans?

    Here's another question you can add:
    * 4. Why the fuck don't we test GMO crops for 20+ years before we start feeding them to people, and esp. children?

    The answer to this and all your other questions is "we're morons, but profit is king". I'm all for science, and I realize genetcially modifying foods is what humans have always done, but never at this speed until recently. Personally I don't take drugs that haven't been on the market for at least two decades... I'd like to be able to take the same stance on GMO foods, but the lobbyists don't like the idea of giving me the information I require to make decisions regarding foodstuffs by requiring "This Contains Genetically Engineered Food" on labels.

    I stay up to date on bioengineering and other life sciences, but it seems that most people don't understand that we really are fucking idiots when it comes to this stuff. It's like blindly copy & pasting huge swaths of code and changing a few numbers in a complex genetics program because it seems to have some of the results we want, but we really don't know if it has only the results we want, we don't really know what the fuck we're doing. We're like those fools who know just enough about computers to be dangerous, only instead of frying their systems we risk harming millions or billions of humans. ::sigh:: It's "patience" that's the virtue, not "patients"... If I ever tackle a problem that's beyond my power / knowledge, where I don't know exactly what I'm doing then I step back and say so, do more research, I don't just plow ahead heedlessly thinking: "What can possibly go wrong?!" then push the uncertain code into production...
    I wouldn't want to eat food that's made this way!

    Ugh, Humans, what a crap species: Brains just the right size to end all sentient life on the planet, and with just enough motivation to do so accidentally. There's the answer to your Fermi paradox, folks.

  26. Re:Why was that viral gene inside in the first pla by Anonymous Coward · · Score: 4, Funny

    This is Slashdot. We hate technology and science.

  27. Re:Why was that viral gene inside in the first pla by ChromeAeonium · · Score: 3, Informative

    They're untested you say? No they aren't.

  28. Re:Why was that viral gene inside in the first pla by flayzernax · · Score: 2

    And thats why I didn't bother to read the article, post several flames, and proceed to read the +5 informative replies that change my perspective on this virus DNA injection thing.

    I still dislike Monsanto on philosophical grounds ;)

  29. Re:Anything that screws monsanto ? by Haxagon · · Score: 3, Interesting

    ... and millions of people have died and become gravely ill because of it. You're not going to tell me that because lots of people ingested harmful chemicals and developed cancer and terrible, terrible conditions because of it, the human race as a whole should keep on ingesting (patent-able!) feedstock from a company that's so interwoven with the government that it's earned a basic degree of effective immunity for its actions.

    I've had one friend die from lung complications and another deal with lifelong diabetes and a skin condition due to exposure to chemicals Monsanto and Dow were contracted to develop. I do not trust this company with turning my food into closed-source fodder made to sell RoundUp. If there were lean, open biohacking firms that were able to operate, I would support proper testing of their GMOs and I would trust the community much more than I'd trust such a vile group as Monsanto, but the fact is that the patents and legal restrictions bought off by Monsanto make that impossible.

  30. Re:Why was that viral gene inside in the first pla by fearofcarpet · · Score: 2

    When you insert a new gene (such as an herbicide resistance gene in Monsanto's Roundup Ready crops) into a plant, you also need to insert a piece of DNA called a promoter that tells the plant to turn the gene on. The scientists who created the GMOs chose to insert the promoter from the cauliflower mosaic virus (CaMV), as it is particularly good at this task and is very well studied. This promoter also happens to include part, but not the entirety, of gene VI from the virus

    And from this observation--that part of a gene was left intact in order to act as a promoter to express a desired gene--TFA jumps to the conclusion that this gene could interfere with RNA silencing/human health/OMG the world is going to end. Assuming that the promoter is somehow translated into a gene product, which would be an aberration unto itself, you have to jump to the conclusion that 1) the partial gene would produce functional gene products, 2) in sufficient quantities to affect a human and 3) that they would survive digestion with enough potency to impact human health. I don't claim to be an expert, but outside of prion diseases, most food-born illnesses are bacterial because proteins and RNA don't survive the gut.

    There are certainly legitimate concerns over GMO, but articles like this promote FUD in the public that you're going to get AIDS from drinking Pepsi because the high-fructose corn syrup was derived from GMO corn. I am constantly having to talk family members off the ledge because they think GMO = poison because words like "transgenic," "gene," "viral DNA," etc. sound scary when what is in fact far scarier is "Monstanto IP lawyer."

    --
    Actually, I wrote my thesis on life experience.
  31. Re:Why was that viral gene inside in the first pla by Sique · · Score: 3, Insightful

    You know, irony is not easily understood online.

    --
    .sig: Sique *sigh*
  32. Re:Why was that viral gene inside in the first pla by Anonymous Coward · · Score: 5, Insightful

    Not a virologist, but your response doesn't sound kosher. I don't see anywhere in your references, or any scientific citation linked by anyone at this site, anything at all to suggest that Gene VI insertion was at all Intentional.
      I somehow doubt that it is...but, of course, that would make transgenic technology far less precise than biotechnologist would love people to believe--
      which it is not.

    Anyone making an analogy that we have been ingesting CaMV with veggies all along, so it must be safe--is drinking Cool Aid, We certainly weren't ingesting Gene VI in a transgenic crop carrying antibiotic resistance markers, EPSPS's, Bt, and random superfluous other pieces of DNA

      Gene VI isn't just a simple protein; it has multiple functions. Since Gene VI alters RNA silencing and transactivates (http://www.pnas.org/content/86/23/9203.full.pdf) the products of each individual transgenic crop are unpredictable and unknown--could be mutant proteins, toxins, allergens or be harmless. No one knows. And anyone who tells you that they can rule out a food allergy by doing a bioinformatics search for protein homology, has never once worked with a food allergy patient, because the inconvenient truth is that the gold standard of food allergy diagnosis is a placebo controlled blinded food trial... in real life. There are no in vitro tests or homology tests that are precise enough to predict food allergy..... which is why each transgenic crop needs to be uniquely labeled with some sort of a code enabling tracing it to its specific genetic modification.

  33. Re:Why was that viral gene inside in the first pla by Giftmacher · · Score: 5, Insightful

    Quite, though I'm not convinced by the first link's suggestion that this could be a human health issue. As a scientist I've got to say it's not a great article, there's a rather obvious attempt to shoe horn a health scare into the analysis, to say nothing of smearing a regulatory body. (The latter in spite of a full public disclosure.)

    As for the substance of the science. Yes, gene VI is toxic to plants but it's toxic when expressed inside a cell, so while it may be a danger to an infected plant it's got serious hurdles to leap before it gets expressed in a mammalian cell. I'd also note that while ribosomes are highly conserved, plant and mammalian ribosomes are not identical, so even if the protein was expressed in a human cell it's by no means certain to be functional. Moreover, it appears this isn't even the full length Gene VI, so it would by no means be functional even in plants.

    At most there's a risk to the GM crop in the form of a reduced viral resistance, that's a threat to Monsanto's bottom line more than anything else.

    On the whole I'm not impressed with the editorial commentary by Latham and Wilson, there's more than a whiff of axe grinding and self promotion. "Independent science news is clearly a misnomer". I hope they've written this letter to the journal in question, rather than jeering from the sidelines.

  34. Re:Anything that screws monsanto ? by Paradise+Pete · · Score: 2

    So your theory then is that we're still here, therefore nothing is dangerous?

  35. Re:Why was that viral gene inside in the first pla by DrVomact · · Score: 2

    Quite, though I'm not convinced by the first link's suggestion that this could be a human health issue. As a scientist I've got to say it's not a great article, there's a rather obvious attempt to shoe horn a health scare into the analysis, to say nothing of smearing a regulatory body. (The latter in spite of a full public disclosure.)

    Though the issues are not always the same, European scientists are susceptible to the same pressures as those in the U.S.—pressures brought to bear by political and economic interests. In this case the authors of the original article—Podevin and du Jardin—are, respectively, Italian and Belgian; both are employees of publicly funded institutions. As for the source of the first cited article—Independent Science News—it must be said that though they may be "independent" in some sense, they do have an agenda. Other articles linked to on the same page include "Feds grant $500k to genetically engineered livestock research: Terminator for Animals?", "Insecticide 'unacceptable' danger to bees, report finds", "New links between pesticides & Parkinson's", "Obama Administration Snubs Risks, Moves Forward With GE Salmon Approval" and so forth. These may all be unprejudiced articles containing nothing but true statements, but they do show a certain direction of interest.

    As I said, there is substantial prejudice in the European Union against all genetically modified crops. This prejudice is fueled by economic interests that want to discourage the import of cheap produce from the United States, and are reinforced by draconian regulations of the European Union and the various National Governments, as well as media propaganda.

    I am personally only familiar with Germany (where I was born and still have relatives that I visit regularly), but the people here have been brought to believe that any genetically engineered plant is pretty much the same thing as poison. Germans are willing to spend extra money for food labeled as "Bio", which could be translated as something like "organic". However, the "Bio" label actually means something in the EU, unlike "organic" in the United States. Produce marked as "Bio" must conform to strict government regulations (e.g. you can raise only 12 pigs per (some unit of land I can't remember). This isn't necessarily a bad thing, but it shows that the entire attitude to food consumption and agricultural regulation in the EU is substantially different from that in the US.

    What's unfortunate is the destructive effect of popular attitudes and governmental policies on scientific research. I doubt that it would be possible for any European scientists to publish a positive finding in regard to genetically modified crops and continue to receive any kind of public or private funds. The same is, of course, true of other "hot" buttons—such as "climate change" (Klimawechsel). The news media constantly push this issue not only as established fact, but as an imminent threat. The effectiveness of the propaganda was brought home to me when, during a conversation with a stranger—an elderly woman—at a bus stop, I chanced to remark on how much colder it is in Munich in January than in Texas. I was instantly subjected to a diatribe about Klimawechsel, and how the presence of a mere 2 cm of snow in January was a dire symptom of this threat. I did not dare disagree. It's snowed a good 12 centimeters since then; I hope she's happy. I had to shovel the snow out of my aunt's driveway...so I am somewhat less than happy.

    I lament the global decline of science, though it is only one symptom of the decline of the West. Yeah, Spengler was right.

    --
    Great men are almost always bad men--Lord Acton's Corollary
  36. Re:Why was that viral gene inside in the first pla by RDW · · Score: 2

    Not a virologist, but your response doesn't sound kosher. I don't see anywhere in your references, or any scientific citation linked by anyone at this site, anything at all to suggest that Gene VI insertion was at all Intentional.

    The point is that the 35S promoter and gene VI overlap in the viral genome, or to put it another way the same bit of sequence has multiple functions (this is common in viruses, which tend to make very efficient use of their genetic material).The sequence in question is at about 10 o'clock in this circular genome map:

    http://en.wikipedia.org/wiki/File:CauliflowerMosaicRNA35S.png

    The fine inner broken ring is the 35S transcript, and the promoter is at its 'blunt' end. This aligns with the 'sharp' end of gene VI ('TAV', in red).

    If you use the promoter in a GM plant (as is commonly done) then you're inevitably also bringing along a fragment of the gene, since it's actually the same sequence. This is not the same thing as inserting the entire gene, of course, though the fragment may have some subset of the gene's multiple known functions. The DNA construct used to make the GM plants is not designed to express this fragment, but there's a possibility than once inserted in the host genome (depending on the surrounding sequence elements), the fragment could be expressed from some other promoter, making a protein that is eventually eaten by us.

  37. Re:Anything that screws monsanto ? by AmiMoJo · · Score: 5, Insightful

    Its known and expected that P35S would be present.

    It is only supposed to be present in the lab, the actual crop you grown isn't supposed to have it. They use it during development only.

    So again, nothing that might be been produced (but in fact have not been seen - hence "putative") by this gene's presence was found.

    ... in some databases. It is not certified for human consumption, and they are not scrambling to get that certification. So what TFA is saying is that on paper it looks okay but needs proper testing to determine if that is in fact the case.

    Monsanto screwed up big time. They put something in our food that isn't known to be safe and that wasn't supposed to be there. The proper thing would be to destroy all affected crops and produce, but that would be expensive and Monsanto would have to pay vast compensation so instead they are just hoping that it turns out to be safe, or if not that they can bribe the relevant people.

    --
    const int one = 65536; (Silvermoon, Texture.cs)
    SJW, n: "Someone I don't like, and by the way I'm a fuckwit" - AC
  38. How about labeling GMOs now? by Lorien_the_first_one · · Score: 2

    Do the same people who stridently assert that labels for GMOs are not required think the same after this?

    This is probably the tip of the iceberg.

    --
    The diversity and expression of human opinion is essential to human survival.
  39. Re:Anything that screws monsanto ? by marcello_dl · · Score: 2

    In the last couple thousand years lots of people died because of wrong habits. Google for lead poisoning and the Roman empire, for an example.

    --
    ---- MISSING MISCELLANEOUS DATA SEGMENT --- [sigdash] trolololol
  40. Re:Why was that viral gene inside in the first pla by cayenne8 · · Score: 2

    As I said, there is substantial prejudice in the European Union against all genetically modified crops.

    I wish the same could be said for America, but alas, the huge Agro-Business lobby and money squashes anything even close to dissent. Hell, states now have laws that make it a felony, I believe, if you merely talk about about the food industry in print, radio or tv. Look how Oprah was attacked by the beef industry.

    ...but it shows that the entire attitude to food consumption and agricultural regulation in the EU is substantially different from that in the US.

    There is a push in the US, locally by people to try to change this attitude. I personally think it is killing us as a society, the obesity in children and oncoming storm of diabetes coming on is sign of that to me.

    The trouble is...the US Federal Govt is in cahoots with big Agro-Business. We have a very small and dispappearing local farmer population, the govt funds and promotes largely the wrong kind of foods to be made cheap to the masses (why not subsidize vegetables rather than just feed corn?)..and those in charge of the Fed policies on farming and food are comprised of a revolving door for people from Agro-Business into the FDA and USDA and then back to those same industries.

    I for one, am a bit scared about the mono culture they're developing for our food system. We saw a bit of the problem in the past year or so, with droughts in some regions, and ALL food prices spiked quickly. We are in danger due, IMHO, due to now having enough diversity in our food system, different strains of crops, animals...etc.

    There is a movement, but it is slow going and against heavy opponents that have a lot of $$ and total influence over the government at all levels.

    --
    Light travels faster than sound. This is why some people appear bright until you hear them speak.........
  41. Re:Why was that viral gene inside in the first pla by kelemvor4 · · Score: 2

    No 3 and 3b are not accurate.

    http://www.ncbi.nlm.nih.gov/pubmed/16001857

    I wish this 'Scientist don't test GMO' nonsense would stop. Seriously, you look like an idiot.

    Do you know what isn't tested? non GMO food; even though there is bacteria in the soil which does gene swapping between animals and plants. OMG it all going to END!!!

    Did you actually read the link you posted? It clearly indicates that testing was done by Slovenia. I'm not necessarily saying that it IS the end of the world; but I am saying the government organizations in my country that are charged with ensuring food safety have not done any tests - so we don't really know if it's safe or not. At best it is suspicious that Monsanto has not been forthcoming and pushed the government to perform such testing and publish the results. If they had nothing to hide, it would go a long way to free them of their terrible reputation.

    In countries where testing has been done, there have been negative results; such as the one leading to the article we are commenting on. Imagine that.