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NIH Studies Universal Genome Sequencing At Birth

sciencehabit writes "In a few years, all new parents may go home from the hospital with not just a bundle of joy, but with something else—the complete sequence of their baby's DNA. A new research program funded at $25 million over 5 years by the National Institutes of Health (NIH) will explore the promise—and ethical challenges—of sequencing every newborn's genome."

25 of 128 comments (clear)

  1. Why wait for birth? by fezzzz · · Score: 2, Insightful
    1. Re:Why wait for birth? by ShanghaiBill · · Score: 2, Insightful

      Yes, it seems silly to wait till birth. That is too late to deal with many genetic problems. With earlier testing, the parents will also have the option of aborting if the genetic problems are severe. In days gone by, prenatal testing, such as amniocentesis, was invasive and could cause problems. But there are now several non-invasive prenatal tests which employ DNA sequencing of fragments of fetal DNA in the mother's blood.

    2. Re:Why wait for birth? by killkillkill · · Score: 2

      parents will also have the option of aborting if the genetic problems are severe

      Or minor. Or because it's a girl.

    3. Re:Why wait for birth? by Feyshtey · · Score: 2

      It's not a slippery slope. It's a reality. The world has moved significantly down the road of choosing which lives are worthwhile, and which are just too big of a hassle. The scope of the lives that are ended broadens every year rather than narrowing, and correlates closely to the entitlement and selfishness of those choosing.

      People who abort because they dont want to deal with a child who has special needs are not uncommon. Girls are aborted because their less valued. Now lets ensure that every parent knows the color of their child's hair and eyes, skin tone, temperment, susceptibility to cancer or the flu or the common cold. The shape of the child's head, or if they are genetically likely to have birthmarks, or maybe just be ugly.

      Are you honestly going to argue that there are not people shallow enough to abort a baby because they dont want to have an ugly kid?

      --
      "But we have to pass the bill so that you can find out what is in it,..." - Nancy Pelosi
  2. No. by some+old+guy · · Score: 5, Interesting

    If no compelling medical issue requires sequencing in a newborn, it is invasive and coercive to conduct it.

    Any possible beneficial result is overshadowed by the inevitable abuse and misuse of the results. All I can see is creating a brand for each new child that will influence and determine decisions that may in fact have no significant scientific bearing. Predisposition is not certainty, and decisions based on uncertainty are, well, stupid.

    I'll be damned if I want my grandchildren automatically genome-branded by the government to the detriment of their education, employment, and insurability.

    --
    Scruting the inscrutable for over 50 years.
    1. Re:No. by Joce640k · · Score: 2

      If no compelling medical issue requires sequencing in a newborn, it is invasive and coercive to conduct it.

      Why? They might have some genetic problem which will appear later in life.

      The real problem isn't the medical implications, it's the fact that we know the government is going to want a copy of the data (for the baby's own protection, of course...)

      --
      No sig today...
    2. Re:No. by Anonymous Coward · · Score: 2, Interesting

      The question really is: Is there a compelling medical reason to sequence a newborn?

      I know the VA was looking into the possibility of sequencing all military personnel. The idea was if military personnel had it coming in, then it could be analyzed and they could start predicting which medicines would work well for that person and which wouldn't. To have that all known upfront could make battlefield medicine a whole lot more effective, reduce the chances of allergic reactions, and provide better care.

      In some situations they do it now and it does lower costs by allowing them to avoid ineffective drugs for that person. There's still a lot to learn and obviously a lot of drugs they have no idea what the impact is. Since the federal government doesn't have to pay the portion of fees that covers intellectual property if the federal government funded the research, they think this could save a ton of money.

      Incidentally, when ObamaCare was being debated, most of the people I know familiar with this hoped that health insurance would be nationalized (for other reasons), but a convenient side effect would be it would quickly be cost effective to sequence the average American's DNA allowing them to provide better care.

      Obviously there are huge privacy and discrimination concerns, but there is a real possibility for a medical benefit so I think there needs to be some debate.

    3. Re:No. by Anonymous Coward · · Score: 5, Insightful

      You worry about insurance companies getting accurate data so that they can compute the true cost of the risk that a customer carries. If you feel that isn't appropriate, then what you want is not insurance. Insurance is the pricing of risk. What you want is pooled expenses, which is what government programs is about - despite the wide-spread misunderstanding, that's not the service that insurance is supposed to offer. Insurance prices your individual risk while pooled expenses lets everyone pay for other people's risk. The two are fundamentally different. If you oppose giving insurance companies accurate information, then you are saying, whether you know it or not, that you don't want health care to be handled using an insurance model - you want a government solution using pooled expenses. Which would also solve your problem of worrying about insurability.

    4. Re:No. by Thanshin · · Score: 2

      No, the problem is that there is no mechanism to punish the government when it does such stuff, other than revolution.

      That mechanism has to be created.

  3. The paternity problem. by Rande · · Score: 4, Interesting

    The problem of the screams and arguments when the father finds out at the hospital that the child isn't biologically his.
    Even 1% will mean that the report won't automatically be given to the parents, or perhaps only a synopsis.

    1. Re:The paternity problem. by Anonymous Coward · · Score: 5, Insightful

      It shouldn't be legally possible for a person to make a decision about whether to take on legal parental responsibilities while being possibly deceived about whether they are the biological parent. That situation is no different, not in any relevant way, than getting a switched baby home from the hospital - something everyone can obviously see is horrible when it happens to women. So automatic parental certainty as a consequence of such DNA tests isn't a problem - it's a solution to a problem.

    2. Re:The paternity problem. by staalmannen · · Score: 4, Interesting

      The scary thing is that such information is already now witheld from the fathers also when the results are negative in standard genetic screenings (genetic risk assessments, donor profile, ...). The positive part is that the frequencies are lower than commonly cited. http://en.wikipedia.org/wiki/Misattributed_paternity

  4. Inborn Errors of Metabolism testing. by Guppy · · Score: 2

    The article linked briefly mentioned the existing newborn screening program (Inborn errors of metabolism screening), but I'd like to discuss it a bit further. This is a long-existing program in the US which is administered at the state level, which means the particular regulations and included diseases vary; some states have far more extensive testing than others.

    The program is mandatory (usually with some form of parental opt-out), and checks for certain rare genetic diseases, the proto-typical example of which was phenylketonuria -- a metabolic defect that will lead to seizures and mental retardation if allowed to progress, but if treated early (by adhering to a strict diet) will allow a for a relatively normal level of intelligence and life-span. As time and medical understanding progressed, numerous other diseases have been recommended as well:
    http://www.acog.org/Resources%20And%20Publications/Committee%20Opinions/Committee%20on%20Genetics/Newborn%20Screening.aspx

    From a public health perspective, one issue is that the cost of the program has to be balanced against the relative benefit; since each new test added is state-wide, the cost quickly adds up. And, everyone likes saving babies (especially disease-specific foundations, lawyers, and politicians), there's pressure to add conditions which are extremely rare, to the point that one additional "saved" baby can cost multi-millions of dollars.

    While a sequencing at birth could potentially replace most of these individual tests, there's quite a bit of scope for feature-creep as to what is required to be done with the data afterwards. I could see this becoming very expensive indeed.

  5. Re:Are they collecting everything? by Required+Snark · · Score: 4, Funny

    I misread it as NHL.

    --
    Why is Snark Required?
  6. Re:Gattica by oodaloop · · Score: 2

    No "I" for obvious reasons if you've seen the film

    Or know anything about DNA.

    --
    Tic-Tac-Toe, Global Thermonuclear War, and relationships all have the same winning move.
  7. Yeah...Thansks but no thanks. by Lord+Kano · · Score: 3

    I'm not having my children's DNA available to be cataloged and searched by anyone. I'll let them decide that when they're adults.

    LK

    --
    "Hi. This is my friend, Jack Shit, and you don't know him." - Lord Kano
  8. Genetic database by msoftsucks · · Score: 2

    In NY state, in many others and in cities around the world, DNA is taken from you when you are arrested. It doesn't matter if you are innocent or if the charges are misdemeanors, your DNA is placed in a database and will never be removed. In NY, Murdoch's education initiatives are already sequencing all children that are in public school. Just like the DMV selling your private info, Murdoch has made deals with insurance carriers to sell them this sequence data. If your DNA is sequenced it will be used against you in ways that you will never know. Gattaca is already here.

    --
    Quit playing Monopoly with Bill.
    Linux - of the people, by the people, and for the people.
  9. Re:Are they collecting everything? by K.+S.+Kyosuke · · Score: 2

    So there will be a universal database of sequenced genomes from this generation, on

    Why would universal sequencing imply a database? You can get it on a media the same way you get a birth certificate. If you lose it, your problem (at least the genome can be re-sequenced, unlike other kinds of medical records).

    It will be supported by liberals to "save the children"

    How obviously reasonable medical regulations and procedures correspond with "liberalism" or "non-liberalism" is beyond me. I have yet to see "liberal" and "non-liberal" doctors - so far, I haven't seen any such dichotomy in my country. Doctors around here seem to be very uniform in how they deal with their work (which could be an artifact of our socialistic past, but still, I just can't see any one of them rejecting useful and money-saving preventative measures).

    --
    Ezekiel 23:20
  10. QED why this is a BAD IDEA by RobertLTux · · Score: 2

    If this can be used to decide to ABORT a child then this is a bad idea.

    gene markers that could be used to decide that a child needs to be aborted

    1 wrong gender
    2 not smart enough
    3 not athletic enough
    4 wrong eye/hair color
    5 not "pretty enough"
    6 Gay/Not Gay
    7 wrong skin color (bonus reason for Mixed Parents)
    8 Voice not Right
    8 wrong body build

    i could go on but the real Evil would be when gene editing is possible.

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    1. Re:QED why this is a BAD IDEA by Immerman · · Score: 2

      > Gene editing should lead to a healthier and smarter population. Why is that "evil"?

      I would say it's not, inherently. However the reality is that such technology is likely to be far more accessible to the rich than the rest of us - initially they'll be the only ones who can afford it, and going forward they will still be the ones who can afford the more extensive/valuable cutting-edge gene mods. The almost inevitable result will be a race of supermen who are objectively better than the rest by almost any metric you care to use. And that will be evil if you are of the opinion that a measure of social equality is a good thing. Just look at how ugly racism and classism has been in a world where the underlying reality is that the differences are primarily cosmetic or cultural - how much worse could it be in a world where the rich, powerful people really *are* consistently, measurably, better than the rest of us?

      --
      --- Most topics have many sides worth arguing, allow me to take one opposite you.
  11. promise vs ethical challenges by PopeRatzo · · Score: 2

    Who wants to bet they're going to spend a lot more time and energy on the "promise" than they will on the "ethical challenges"?

    How did our species survive so long without this innovation? We better get right on this.

    --
    You are welcome on my lawn.
  12. Re: Insurance company cheating? by msoftsucks · · Score: 2

    This is already happening. I have a cousin who was arrested a couple of years ago participating at a demonstration. A cheek DNA sample was taken at booking time. She recently applied to get a pricier health care plan and was denied. She didn't understand why considering it was with the same insurance carrier and hadn't used her existing policy much. They wouldn't tell her when she pressed them on this issue. She decided to sue, and in discovery it turns out they had obtained her DNA sequence under the guise of "medical research". The case officer in charge of approving her application had seen this info and decided to reject it because she had tested for two faulty copies of the BRAC2 gene which raises her chances of getting cancer significantly. The insurance company eventually backed down, and my cousin was able to get the plan she wanted. But, to how many others is this happening? What other conditions are they filtering out for? Who knows. But it is quite clear that this is just going to expand. There is an ulterior motive for building these DNA databases and we are just pawns in the big picture.

    --
    Quit playing Monopoly with Bill.
    Linux - of the people, by the people, and for the people.
  13. Re:Are they collecting everything? by Feyshtey · · Score: 2

    Why would universal sequencing imply a database?

    Exactly. That's like saying just because the NSA is collecting email and phone logs they are also indexing it all and searching for patterns and... Shit... Nevermind.

    Oh, right, that's because thats to protect us. It's not like sequencing every kid's DNA is going to be used to correlate behavior to genetic traits and... Shit.... forget I said anything.

    --
    "But we have to pass the bill so that you can find out what is in it,..." - Nancy Pelosi
  14. Insurance by Immerman · · Score: 2

    The initial example captures it quite well, but let me break it down for you:

    Insurance companies are in the business of making money, they do this by charging you more than they ever expect to pay out. If they could predict the future with 100% accuracy then they would charge you a rate at which they would collect 100% of the expenses you will incur, plus profit.

    Since they can't predict that accurately they instead spread the risk around - if everyone has an unpredictable 5% risk of incurring $100,000 in covered expenses, then they will charge everyone a rate that nets them 5%*$100,000 = $5000 per person, plus profit. 19 out of twenty people pay for nothing, and the twentieth collects. But since you don't know beforehand whether you're going to be one of the nineteen who lose out, or the twentieth who "wins", you go ahead and pay so that you don't end up being stuck with the $100,000 bill yourself.

    As risk assessment gets more accurate they can charge the high-risk people more and more and, ideally, the low-risk people less and less. The better the prediction the closer everyone gets to paying for all their own expenses, plus the profit of the insurance company, and the less point there is to buying insurance at all. You could just pay into a savings account instead and keep the profit portion for yourself.

    --
    --- Most topics have many sides worth arguing, allow me to take one opposite you.