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Team Builds Viruses To Combat Harmful "Biofilms"

Scientists from MIT and Boston University are creating viruses that will wipe out "biofilms" that contain harmful bacteria on surfaces of the human body and industrial or medical devices. "Bacterial biofilms can form almost anywhere, even on your teeth if you don't brush for a day or two. When they accumulate in hard to reach places such as the insides of food processing machines or medical catheters, however, they become persistent sources of infection. These bacteria excrete a variety of proteins, polysaccharides, and nucleic acids that together with other accumulating materials form an extracellular matrix, or in Lu's words, a "slimy layer," that encases the bacteria. Traditional remedies such as antibiotics are not as effective on these bacterial biofilms as they are on free-floating bacteria. In some cases, antibiotics even encourage bacterial biofilms to form."

108 comments

  1. A Remedy Worse Than the Illness by TuringTest · · Score: 1

    What will stop these MIT viruses to become our next (welcome) overlords?
    What's to control these critters not to accumulate in hard to reach places instead of the original bacteria, while mutating into dangerous things?

    --
    Singularity: a belief in the "God" idea with the "demiurge" relation inverted.
    1. Re:A Remedy Worse Than the Illness by AndersOSU · · Score: 4, Insightful

      The fact that the people at MIT aren't idiots and can design a virus that targets bacteria, and not the massively different mammalian cells?

    2. Re:A Remedy Worse Than the Illness by eln · · Score: 5, Funny

      That's really no problem. We'll develop a fast-growing strain of wheat that we can use to make huge amounts of bread in order to develop molds that can be modified to feast on the virus.

      Of course, this strain of wheat may grow too fast to be manageable, but that's really no problem. We'll just release hordes of pigeons to eat the excess grain. When the pigeons get too numerous, we'll release lizards that will eat the pigeons' eggs, thus controlling the population. To control the lizards, we'll release waves and waves of Chinese needle snakes to wipe them out. Of course, the snakes are even worse than the lizards, so we'll line up a fabulous type of gorilla that thrives on snake meat. Then, when wintertime rolls around, the gorillas will simply freeze to death.

      As you can see, it's quite an elegant solution.

    3. Re:A Remedy Worse Than the Illness by hedwards · · Score: 3, Informative

      There's nothing to stop them from accumulating, but after the original bacteria are dead, the phages lose the ability to reproduce as like with a virus they can only reproduce by utilizing essential parts of a host cell.

      As for the danger part, the only way they could ever cause a problem to humans is if they were to somehow kill off helpful bacteria, doing so in such an efficient manner that there were none left at all. And that won't happen, even when scientists want to kill an entire colony of bacteria down to the last one, it doesn't happen.

      Bacteriophages are completely unable to infect a human as they are unable to cope with any form of DNA which isn't ring shaped. If human DNA were to become ring shaped we would have much larger problems on our hands.

      The technique is safe, the bigger issue is getting approval of this sort of thing for use in the US. Currently, the only use that is near is the use of phages to keep down ecoli in beef down to a minimum.

    4. Re:A Remedy Worse Than the Illness by Brigadier · · Score: 2, Insightful



      I understand your point but you cant' help but think this thing could be one mutation away from attacking say good bacteria cultures. Thats still my biggest fear with respect to genetic modification is that we still don't understand the ecology of micro organisms in its entirety.

    5. Re:A Remedy Worse Than the Illness by Jaaay · · Score: 1

      As safe as anything else... I'm sure a lot of stuff with geniuses has ended up doing more harm than good but that'd be a pretty stupid reason to stop scientific progress when there's probably a greater chance of this Earth being blown away by a near earth object that NASA isn't monitoring than this.

    6. Re:A Remedy Worse Than the Illness by Alchemar · · Score: 1

      They have been genetically enginered to not produce lysine, unless they receive a regular supply of lysine from us, they will die.

    7. Re:A Remedy Worse Than the Illness by SatanicPuppy · · Score: 1

      Shrug. What if it learned to target e coli bacteria? Nice if it's on your lettuce, not so nice if it's in your intestines.

      There are a lot of bacteria in our bodies that we need. There is a lot of bacteria in the world that we need. Creating a virus, a demi-organism that is indisputably capable of mutation, for the purpose of killing bacteria is scary at best.

      Saying, "MIT guys wouldn't be that stupid" is way way too much faith to be putting in someone who is creating something that has serious potential for harm...We have released a lot of macro-organisms into the wild that have caused tons of problems. Micro organisms have at least as much potential for harm.

      --
      ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    8. Re:A Remedy Worse Than the Illness by SatanicPuppy · · Score: 1

      According to TFA the first thing they engineered it for was an e coli biofilm. This makes perfect sense, as e coli is very well understood...Unfortunately we need e coli, which makes their discovery a bit more worrisome.

      My question would be, how long do they last after they run out of food? If they are only viable for minutes or hours, maybe not such a big deal. Are they resistant to stomach acid? If not, again, no big deal...If you happened to eat some that were still viable, they wouldn't make it past the stomach. How do they spread? Finally, how likely are they to mutate into something that is nastier than the original organism?

      Bioengineering is scary stuff; there is a lot of potential for unforeseen consequences.

      --
      ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    9. Re:A Remedy Worse Than the Illness by SatanicPuppy · · Score: 1

      Having re-read TFA, the first thing they engineered it for was e coli. Sigh.

      --
      ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    10. Re:A Remedy Worse Than the Illness by tloh · · Score: 1

      Saying, "MIT guys wouldn't be that stupid" is way way too much faith to be putting in someone.......

      How about saying "Scientists aren't that reckless or irresponsible"? In most disciplines, especially health-related, researchers and academic professionals adhere to a strict code of ethics that has the intent of protecting the public for whom they serve. I think it would be rash to believe that these MIT guys would stake their reputations and professional credibility by doing shoddy science and being lazy with their work by carelessly releasing something that will indiscriminately wipe out everything under the sun. Put simply, there is a world of difference between being "smart" and being "mature". Geeks should remember that.

      --
      Stay sentient. Don't drink bad milk.
    11. Re:A Remedy Worse Than the Illness by Anonymous Coward · · Score: 0

      The fact that the people at MIT aren't idiots

      Let's just call them TOTAL IDIOTS and have done with it. As I'm sure many other posts will point out, biofilms have many, many synergistic relationships with humans and other complex organisms. They really are village idiots meddling in things they don't understand.

    12. Re:A Remedy Worse Than the Illness by Nullav · · Score: 1

      It seems that shortening its lifespan would be a good way to prevent this. With that short of a lifespan, mutations simply won't matter. If they're stuck in the food or on the biofilm, they'll simply die due to lack of a host bacteria to to reproduce in.

      --
      I just read Slashdot for the articles.
    13. Re:A Remedy Worse Than the Illness by SatanicPuppy · · Score: 1

      That's still a huge assumption. There is nothing special about a scientist that makes them more clever, ethical, or honorable than any other schmo. They can make mistakes, use poor judgment, or just fail to appreciate the consequences of their actions.

      Adhere to a strict code of ethics. Jesus. You know, lawyers adhere to a strict code of ethics as well, they are judged by a council of their peers on their ethical conduct, and if they are found wanting they are forbidden to practice. Why does no one hold them up as shining paragons of virtue?

      I'm not anti-science, but I don't automatically believe something is a good idea just because a scientist came up with it.

      --
      ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    14. Re:A Remedy Worse Than the Illness by Alphager · · Score: 3, Informative

      Virii don't die. According to some definitions, they aren't even alive.

    15. Re:A Remedy Worse Than the Illness by Brigadier · · Score: 1



      funny when I read this I couldnt' help but remember Jeff Goldblum's characters famous words in jurassic park ' nature always finds a way'

    16. Re:A Remedy Worse Than the Illness by AndersOSU · · Score: 1

      Actually I specifically avoided saying that the MIT guys aren't that reckless or irresponsible specifically because it is a huge assumption.

      What is not a huge assumption is that they aren't stupid enough to design a virus that can exploit a common vector in both bacterial and mammalian cells. The point of my original post is that there are huge, massive, and easily exploitable differences between bacterial and mammalian cells. Worrying that a virus that targets a plasmid will mutate to be able to target human cells is like worrying that a baleen whale will mutate to be able to prey on surfers.

    17. Re:A Remedy Worse Than the Illness by SatanicPuppy · · Score: 1

      Yes, I understand that it's not going to affect people; I'm not an idiot. That would be the biggest evolutionary jump ever.

      My argument (which I've expressed repeatedly through the thread) is that it may affect bacteria other than the bacteria intended, bacteria that we need. Engineer something that eats e coli and you get the good stuff as well as the bad stuff, and if it picks up a decent infection vector, then we could end up with a real problem.

      --
      ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    18. Re:A Remedy Worse Than the Illness by hedwards · · Score: 1

      My question would be, how long do they last after they run out of food? If they are only viable for minutes or hours, maybe not such a big deal. Are they resistant to stomach acid? If not, again, no big deal...If you happened to eat some that were still viable, they wouldn't make it past the stomach. How do they spread? Finally, how likely are they to mutate into something that is nastier than the original organism?

      The don't really eat, so food isn't the issue. They have as much energy as they ever will when they are created. The question that you are getting at is what happens when they run out of bacteria to infect. The basic answer to that is more or less nothing. At that point they don't reproduce, they eventually start to break down, and are typically flushed out of the body. How long this takes really depends upon the specific variety, but it tends not to matter because the mutations only happen during replication.

      Basically, stomach acid isn't an issue, because in the majority of the treatments so far, the phages are placed directly upon tissue which has been exposed by surgery. In the cases where it did go through the stomach, that is probably not sufficient to kill it, as a virus is capable of going through the stomach under certain conditions.

      A virus is what one may term an absolute obligate parasite, meaning that it is completely unable to reproduce or feed without a host cell to infect. Whether a single virus continues to exist after the hosts are all gone or not is moot, as an attempt to hijack a cell for which it is not mutated would invariably lead to failiure. A person or just about any multicellular organism wouldn't miss one cell.

      The research requires for the phages to mutate in order for it to be useful over a period of time. Bacteria mutate, which is why antibiotics can be a problem, but phages mutate at a similar rate as bacteria do, ensuring that there will always be a strain that can kill off any bacteria one can find. In terms of danger, a phage cannot ever infect a person, they lack the ability to infect something that doesn't have ring shaped DNA.

      I tend to agree with you about unforseen consequences, but these are in all cases I have heard of, found in nature. They are typically found in a culture of the specific bacteria that is in need of erradication. The only difference is concentration. I am definitely emphasizing this because I personally get worried about genetic engineering and things like that. I can assure you that it is too expensive for too little reward to engineer something like this. It just wouldn't pay to do so. It's kind of like engineering an identical type of apple to one which one has growing in the backyard so that one has apples for lunch during summer. Nobody would do that because it is both expensive and time consuming. Typically if you have a strain of bacteria, helpful or not, there is already a colony of phages that are preying on it.

    19. Re:A Remedy Worse Than the Illness by SatanicPuppy · · Score: 1

      Sure. The proof of concept in the article was them taking a phage that preyed on e coli and bulking it up to make it more effective.

      I'm not worried about it infecting people, I'm worried about it colonizing our intestines, and keeping us bacteria free for the rest of our lives (which would be a bad thing). This sort of thing is a possibility, and it's not unlikely that our immune systems wouldn't really care, since the phage isn't capable of harming us directly...In all likelihood, it'd wipe out all the bacteria in your system, and that would be the end of it. Your body would get rid of it (flushing it out of your intestines when you are lacking in e coli would not be a problem =P), and you could eat some yogurt and be fine.

      Still, if the stuff was persistent and able to survive in a dormant state in the environment for a significant period of time, and to pass through the stomach, it could prove to be a significant problem. Hell, it'd make for a pretty good bioweapon in that case; mostly non-lethal, but pretty damn debilitating.

      --
      ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    20. Re:A Remedy Worse Than the Illness by Benaiah · · Score: 1

      Could they write a virus to target a virus? Which is massively different to a bacterial cell?
      But if they did it would be like a war of the viruses going on in your body?
      and you could like use your blood to kill the viruses on your computer

      muahahah.

    21. Re:A Remedy Worse Than the Illness by tloh · · Score: 1

      When considering scientists as individuals, I can see your point about no one person being flawless. But it seems to me you've actually argued against yourself with your additional comments.

      You know, lawyers adhere to a strict code of ethics as well, they are judged by a council of their peers on their ethical conduct, and if they are found wanting they are forbidden to practice. Why does no one hold them up as shining paragons of virtue?

      and yet we make do with the critical services lawyers provide day in and day out. The institution of Jurisprudence via our legal system somehow manages make this imperfect and often despised profession work as an integral part of our society. I think it is a mistake to expect either science or law to be "shining paragons of virtue" or otherwise a panacea that ought to solve *ALL* our problems.

      "A" scientist may be no better than the rest of us, just like individual lawyers can be good or bad. But the scientific community, like the legal community, is on the whole a hell of a lot more responsible than that. And the way our institutions are set up are such that no one individual can bring the house down. Rogue individuals don't get far without the support of their peers and when they screw up enough to hurt others, they *do* get punished.

      Anyway, to conclude, how about having a little faith in the process of peer review, hmm?

      --
      Stay sentient. Don't drink bad milk.
  2. Oh please by Richard+McBeef · · Score: 2, Funny

    We already have stuff to combat this. For the human body, they're called "showers" or more broadly "hygiene". For medical instruments, they're called "autoclaves". None of which introduces foreign living biologics to the body.

    1. Re:Oh please by MagusSlurpy · · Score: 5, Informative

      The whole point of preventing/stopping the films is in places where you can't reach where the films will accumulate. Like an artificial heart. I'd like to see you clean *that* in the shower every morning.

      --
      My sister opened a computer store in Hawaii. She sells C shells by the seashore.
    2. Re:Oh please by megaditto · · Score: 2, Funny

      Showers will not help you clean the internal organs. Adding some antiseptic to your blood will, however. Alcohol is a nice antiseptic, hense twice-daily shots of vodka or whisky are highly recommended.

      Since ethanol can dissolve many lipids, heavy drinking can also help you remove extra cholesterol buildup.

      The best time to sterilize your heart and combat cholesterol is right before driving to work. If you drink right before you get into the car and your commute is less than 30 minutes, the breathalyzer will be negative should you be pulled over!

      --
      Obama likes poor people so much, he wants to make more of them.
    3. Re:Oh please by daem0n1x · · Score: 1

      It's scientifically proven that a small amount of alcohol (1 dose) every day reduces the possibilities of trombosis.

      Besides of that, red wine has anti-aging, anti-cholesterol and anti-carcinogen effects. Beer is not so beneficial, but it's proven to prevent osteoporosis.

      Of course, I'm talking about 1 or 2 doses a day, drink one litre a day and the highly damaging effects of alcohol will overcome any possible benefit.

    4. Re:Oh please by PCM2 · · Score: 1

      Of course, I'm talking about 1 or 2 doses a day, drink one litre a day and the highly damaging effects of alcohol will overcome any possible benefit.

      Oh come now. Any poshibul bemefuh?

      --
      Breakfast served all day!
    5. Re:Oh please by ChrisMaple · · Score: 2, Funny

      It's scientifically proven that a small amount of alcohol (1 dose) every day reduces the possibilities of trombosis.
      Alas, trombosis, caused by the overuse of trombones, is not a common disease.
      --
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    6. Re:Oh please by Anonymous Coward · · Score: 0

      How 'bout cleaning the gene pool? ;o)

    7. Re:Oh please by daem0n1x · · Score: 1

      Isn't it right? How should I write it?

    8. Re:Oh please by Coopa · · Score: 1

      I'm guessing you meant 'thrombosis'?

      Hehe, the parent post made me almost burst out laughing in the office.

  3. I hope they are not serious about selling this by suv4x4 · · Score: 1, Insightful

    It'll like one of those, howtcha call it... Oh: "solutions in search of a problem".

    Where do the deadliest viruses appear? Hospitals. Why? Because hospitals keep killing them and they mutate to survive (rather, weirder mutations manage to survive, and deadlier).

    I've not noticed the majority of the population having a big problem with the bacteria and viruses on their skin, mouse, keyboard, banknotes, whatever. So why work so hard on selling us snake-oil for it?

    1. Re:I hope they are not serious about selling this by Spy+der+Mann · · Score: 1, Flamebait

      Where do the deadliest viruses appear? Hospitals. Why? Because hospitals keep killing them and they mutate to survive

      Uh... hello, weren't hospitals made to CURE diseases? What's your solution then? Oh, right. Instead of making viruses surviving by killing them, we'll just let them survive and kill us instead! Welcome back to the 12th century. Congratulations!

    2. Re:I hope they are not serious about selling this by Attila+Dimedici · · Score: 1

      "Where do the deadliest viruses appear? Hospitals. Why? Because hospitals keep killing them and they mutate to survive (rather, weirder mutations manage to survive, and deadlier)." You are confusing viruses with bacteria. Viruses are not effected by antibiotics (like penicillin). Many bacteria mutate in response to being exposed to antibiotics. However, even in the case of these mutated bacteria, part of the reason that they appear in hospitals is because the antibiotics eliminate the other bacteria, which limit the growth of antibiotic resistant bacteria in the wild.

      --
      The truth is that all men having power ought to be mistrusted. James Madison
    3. Re:I hope they are not serious about selling this by suv4x4 · · Score: 1

      Uh... hello, weren't hospitals made to CURE diseases? What's your solution then? Oh, right. Instead of making viruses surviving by killing them, we'll just let them survive and kill us instead! Welcome back to the 12th century. Congratulations!

      I didn't say hospitals should stop doing what they're doing.

      But I don't have casual surgery while watching TV or browsing Google, so why disinfect myself that entire time? Disinfection DOES bring risks, and this is why it's applied only where it makes sense.

      There are companies and scientists trying to get us worried about disinfection 100% of the time. I can imagine the ads zooming on our skin and little CGI critters talk about how they're ready to strike.

      Pure snake oil right there.

    4. Re:I hope they are not serious about selling this by Lurker2288 · · Score: 4, Informative

      You're partially correct. It's incomplete disinfection that poses the greatest risk, because the survivors are often those bugs best suited to survive repeated treatments. A clean sweep, however, solves the problem. By way of illustration, the rate of hospital-originating resistance Staph infections is much higher in the US than in Europe, where they test pretty much everyone for the bug on admittance and perform eradication procedures on anyone carrying it.

      It would be silly to suggest that they add this anti-biofilm virus to, say, bath soap or dish detergeant, but in places like catheters and dialysis equipment where biofilm acts as a nigh-indestructible reservoir of infection it could be really useful.

    5. Re:I hope they are not serious about selling this by wizardforce · · Score: 1

      t'll like one of those, howtcha call it... Oh: "solutions in search of a problem".
      how do you figure that? if a bacteria species is making a biofilm which if left untreated will kill the patient, how exactly is this a solution without a problem? how many people would die if we didn't try to find a solution?

      Where do the deadliest viruses appear? Hospitals. Why? Because hospitals keep killing them and they mutate to survive (rather, weirder mutations manage to survive, and deadlier).
      first, most of the antibiotic resistance you are talking about is due to idiot people taking antibiotics when they shouldn't, not finishing their dose when they should, and the fact that over time bacteria will evolve a defense against an antibiotic eventually if given enough time. secondly, viruses dont get killed by antibiotics nor are they really technically alive to begin with [call it un-dead] they have a tendency to start in China due to the fact people are exposed to animal viruses on a daily basis, specifically birds and pigs which because pigs have receptors common to both humans and birds in the case of flu, they serve to evolve viruses found in birds to be mre able to infect humans.

      I've not noticed the majority of the population having a big problem with the bacteria and viruses on their skin, mouse, keyboard, banknotes, whatever. So why work so hard on selling us snake-oil for it?
      why do you think this is "snake oil" if it is the only treatment where the cure actually evolves to fight the bacteria you want SPECIFICALLY and not only doesn't poison/attack you, but it won't attack bacteria that we don't want them to, [broadspectrum antibiotics de-populate good bacteria too]
      --
      Sigs are too short to say anything truly profound so read the above post instead.
    6. Re:I hope they are not serious about selling this by Spy+der+Mann · · Score: 2

      There are companies and scientists trying to get us worried about disinfection 100% of the time. I can imagine the ads zooming on our skin and little CGI critters talk about how they're ready to strike.

      Your answer sounds to me very much like knee-jerk reaction derived from watching too much environmentalist propaganda ("ZOMG antibiotics are killing us!!!1"). Sarcasm aside, I assume you didn't RTFA or even TFSummary:


      When they accumulate in hard to reach places such as the insides of food processing machines or medical catheters, however, they become persistent sources of infection.


      This isn't about snake oil, you know. In the first place, it was developed by MIT. In the second place, they're working to solve an already existing problem: Persistent sources of infection. People CAN DIE if they eat contaminated food that comes from an unclean processing machine, just as patients can die from an infection if the doctors use an unclean catheter. If the MIT researchers can get rid of 99.997% of the bacteria in this stuff, hospitals around the world will be very glad at the invention.

      Scientists don't want to sell us anything. Scientists do science and research, and publish the results. In case you're wondering, we got this link from ScienceDaily, not FOX news or CNN.

      So, when you say "There are companies and scientists trying to get us worried about disinfection", you should really say "There are companies trying to get us worried". Do you want to protest against companies trying to sell us their ultra-effective antibacterial soaps? Fine by me, but don't generalize and start accusing scientists.

      And BTW, NOWHERE in the article is mentioned about disinfecting yourself 100% of the time. Where did you get that idea, anyway?

    7. Re:I hope they are not serious about selling this by SatanicPuppy · · Score: 2, Informative

      He probably got it from all the commercials trying to get you to disinfect yourself all the time. Sure, these guys are just scientists doing pure science, but if it's widely approved, do you really think that no company that makes it's living off selling "anti-bacterial" junk will decide to market this as the "100% effective bacteria killing wonder!" Then the stuff will be everywhere, and the odds of some bad mutation cropping up will be significantly higher.

      And just because it's developed at MIT doesn't mean anything, and it certainly doesn't have any bearing on whether or not it's a good idea to start with.

      --
      ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    8. Re:I hope they are not serious about selling this by Anonymous Coward · · Score: 0

      It'll like one of those, howtcha call it... Oh: "solutions in search of a problem".

      No, it isn't. Most bacterial life exists in complex, multicellular communities, not single planktonic cells like you see in the testtube. This trait is one of the reasons why bacteria are so resilient. For example, pathogenic bacteria can form biofilms that are resistant to antibiotics even if antibiotic resistance genes are not present in the population. This is why cystic fibrosis patients so often die of lung infections. Biofilms are a major problem not only in human health but also in industrial applications. Sulfate-reducing biofilms cause billions of dollars in damage every year to pipelines and sewer lines and can contaminate petroleum with sulfur, which increase refining costs. Biofilms also have many practical applications. Complex multispecies communities are generally more efficient at carrying out certain processes (ie biofuel production) than monocultures. The biofilms that line your gut allow you to digest a greater variety of food than you would be able to digest on your own.

      Finally, as someone else pointed out, the viruses we're talking about are bacteriophage, which only infect bacteria. The next phage that infects a human host will be the first.

    9. Re:I hope they are not serious about selling this by Arterion · · Score: 1

      By way of illustration, the rate of hospital-originating resistance Staph infections is much higher in the US than in Europe, where they test pretty much everyone...
      A lot of people in the U.S.A. are too poor buy healthcare (or afford their premiums if they have it.) After all, the tests would just cost more money for the insurance companies, and who wants to hurt the stockholders checkbook with all this extra expense?! How is that fair?! Resistant bacteria is just the price we have to pay for a thriving economy!
      --
      "That which does not kill us makes us stranger." -Trevor Goodchild
    10. Re:I hope they are not serious about selling this by Khashishi · · Score: 1

      Nah, I think most of the antibiotic resistances are from farmers regularly feeding farm animals large amounts of antibiotics to combat their disease-ridden living environments.

    11. Re:I hope they are not serious about selling this by Anonymous Coward · · Score: 0

      But I don't have casual surgery while watching TV or browsing Google

      You really don't know what you're missing out on. Casual surgery is just... wow. You gotta try it to believe it.

    12. Re:I hope they are not serious about selling this by hr+raattgift · · Score: 1

      No, resistance to beta-lactam drugs is entirely due to the selection pressure on genes in the bacteria in question (usually Staph. aureus).

      B-lactam antibiotics derive from soil fungi -- soil is a nutrient rich but very competitive environment for saprophages (things that gain energy by decomposing dead organic matter) like fungi like Penicillin and Cephalosporin, and also bacteria similar to S. aureus (notably many which are gram positive, using a peptidoglycan pathway with a penicillin-binding-protein in the formation of cellular membranes).

      Penicillin species in particular produce b-lactam to interfere with bacterial competitors. This sort of chemical warfare with microbicides is very common in soil dwelling species, and accounts for the majority of antibiotics in common use.

      There are a variety of resistance mechanisms available to mutant strains of bacteria susceptible to b-lactam interference, all of which impose a substantial energy cost to the organism expressing the resistance, thus reducing energy available to out-breed competing species (including non-resistant strains). In the wild, this energy cost means that resistant members of a population are very rare, but in clinical settings, the reverse is true: the competitive disadvantage of the extra energy use more than made up for by the ability to survive exposure to beta-lactam antibiotics.

      Examples of resistance mechanisms include diverting some energy to the production of penicillinase/beta-lactamase enzymes which break down antibiotics (constantly, or when initially stressed by the antibiotics themselves), the expression of slightly altered cell wall building pathways with slightly less energy-efficient molecules with binding sites which do not fit beta-lactam molecules, or which have a much lower affinity for beta-lactam than the (more efficient) wildtype.

      Resistant bacteria colonize many people without causing infection. It's people who are weakened by surgery, trauma, or disease -- people typically found in hospital wards -- who are at risk of infection. Also, infected people are the only people who will usually have any amount of beta-lactam drugs in their systems. Consequently, people in hospital who become infected often become ideal breeding grounds for beta-lactam resistant bacteria like penicillinase-resistant S. aureus strains (VRSA, MRSA, etc.) This is because sick people's immune systems are less able to fight off any bacterial infection, and the presence of beta-lactam antibiotics kill off much of the resistant bacteria's microbial competition.

      This is why resistant bacteria are so important in nosocomial settings.

      The competitive disadvantage of the various resistance mechanisms means that resistance is much less important outside of such settings, since healthy people's immune systems will generally control overgrowth of or even infection by resistant populations even faster than ordinary wildtype nonresistant ones. However, since infections can run away from an immune system, prescribing beta-lactam antibiotics has to be considered carefully, since it will convert a mainly-nonresistant population into a mainly-nonresistant one. If that new population, forced into dominance by the selection pressure of antibiotic consumption, is not controlled by the infected person's immune system, the result can be catastrophic.

      Typically this involves an MRSA-infected patient being hospitalized, thus risking the carriage of MRSA to noninfected patients. Given how expensive and dangerous-to-patients MRSA outbreaks in hospitals are, there is a great deal of pressure on hospital workers to control the carriage of bacteria on nurses' and doctors' uniforms, hands, faces, in their noses or mouths, on bed linens, on linen-handling-staff's hands and uniforms, and so forth.

      Unfortunately, control procedures are imperfect (staff often don't follow them rigorously, for example) a

    13. Re:I hope they are not serious about selling this by hr+raattgift · · Score: 1

      Freezing, cooking, irradiating, or dessicating the meat will kill the relevant bacteria, resistant or not.

      Thoroughly washing one's hands after handling any meat that isn't piping hot will prevent almost any transfer.

      Not eating meat that isn't fully cooked to at least 60 degrees celsius all the way through will prevent any ingestion.

      These procedures would completely eliminate meat as a vector for resistant pathogens.

      Most bacterial contamination in meat in OECD countries comes from poor maintenance and cleaning procedures involving grinding and cutting machinery in meat processing plants, or in plants that do supermarket packaging of meat, or in supermarkets themselves. This is stuff growing on already-dead meat, which has too few antibiotic molecules in it to favour resistant strains over non-resistant ones. Antibiotic half-lives are very short (some can be as short as half an hour, although many have half-lives of four to six hours), so discontinuing treatment a day or two before the animal is killed essentially eliminates it from the meat.

      Most bacterial contamination involving farm animals is direct contact between manure or rumen and human. Farm workers are at risk of infection, as are workers in slaughterhouses. These infections may or may not be resistant, but they will only spread by close contact, which means that if you are a Kevin Bacon or more away from such people, you are at essentially zero risk.

      The problem is that if such workers become infected with a resistant strain and are consequently hospitalized, that strain may be carried to other patients at risk for infection. However, this sort of nosocomial infection is much more prevalent in fully urban settings, and do not seem to disporportionately involve workers in the meat industry.

      (It does happen, however -- from time to time there are cases of farmers who present with resistant bacterial infections which are also subsequently found colonizing (or even infecting) the animals on the farm; but then, from time to time urban people present with resistant bacterial infections which are also found colonizing their cats and dogs too).

      There are a variety of good veterinary reasons to avoid regular use of antibiotics in food animals that are more obvious than any (human) medical ones.

      Another way of looking at it is that in a wild, natural population of Staphylococcus, Enterococcus or Escherichia there is almost always a small number of antibiotic-resistant members. This is useful for these species, since they compete for food and other resources with microbes that produce the antibiotic molecules we concentrate and use as drugs. Non-resistance is much more common, since resistance mechanisms usually involve diverting substantial amounts of energy away from reproduction.

      Antibiotics do not create resistance out of thin air, they just may favour resistant members of a mixed population by eliminating the more efficient non-resistant competition.

      In lab settings, and in living animals (including humans), stopping the intake of antibiotics will eventually return the microorganism populations to a vast majority of non-resistant members and a few (or even no) resistant ones. However, this can take some time, during which the (symptomless) colonies are dominated by resistant members.

  4. Combatting Biofilms? by OfficialReverendStev · · Score: 0

    On first reading the topic I thought it somehow had to do with the MPAA

    --
    A casual stroll through the lunatic asylum shows that faith does not prove anything. - Neitzsche
    1. Re:Combatting Biofilms? by eln · · Score: 1

      I assumed it was related to eradicating the deadliest "bio" film of all: Biodome. I can think of no worthier cause.

  5. May not be a great idea by fredrated · · Score: 5, Insightful

    We exist in a symbiotic relationship with a heck of a lot of bacteria. Attacking biofilms indiscriminately may have serious negative consequences. Hopefully there will be a lot of study before these are released into the environment.

    1. Re:May not be a great idea by wizardforce · · Score: 2, Informative

      these bacteriophages they talk about don't indiscriminately attack bacteria, they are quite specific. since the russians have been using a similar treatment for skin/shallow wound infections for years and even better, the viruses evolve against the bacteria, no problem of resistance cropping up because the virus is evolving as well.

      --
      Sigs are too short to say anything truly profound so read the above post instead.
    2. Re:May not be a great idea by tloh · · Score: 1

      Biofilm formation is an inherently un-symbiotic behavior. The polysaccharide matrix making up the biofilm essentially forms a barrier that inhibits both beneficial as well as harmful interactions. More often than not, biofilms are secreted by aggressive parasites to make it harder for their hosts to remove or kill them.

      One of the best examples I know if is infestations of Pseudomonas aeruginosa in cystic fibrosis. Due to a genetically inherited defective protein pump in the cells of CF sufferers, the bacteria can thrive in the unbalanced environment of their lungs. They form biofilms so that our own immune system can't get to them and take them out. The biofilm, consequently is also an effective barrier against antibiotics and other drugs often used to treat infections.

      If these guys at MIT can work up a viable version of this that is medically safe, it will prevent a lot of headaches for doctors trying to treat various diseases.

      --
      Stay sentient. Don't drink bad milk.
    3. Re:May not be a great idea by phreeza · · Score: 1

      Who says these viruses have to be indiscriminate? could they not attack specific cells only? Don't know very much about biology...

    4. Re:May not be a great idea by SatanicPuppy · · Score: 1

      According to the article, yes.

      The issue is, will they, upon being introduced to an area with diverse "food sources" (this is a horrible metaphor for viruses, because they don't eat, per se, and aren't even really alive, but I'm still going to use it, blah blah) will they stick with the plan, and only "eat" what they are supposed to, or will they branch out and "eat" whatever is available?

      In other biological systems, the answer is often no; the introduced organism eats whatever it wants to. It's tempting to believe, since viruses aren't like regular living things and moreover since these would be genetically modified "specialists" rather than free-range "generalists", that we could beat the problem and use them in an effective, targeted, manner, without much danger of them going nuts and spreading to things we don't want them to spread to.

      Still, the possibility exists that they could evolve to do something other than what we intend them to do, and it is a near certainty that this will eventually happen, given enough different applications of the technology, and enough uses. What kind of damage would come out of that is impossible to know.

      --
      ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    5. Re:May not be a great idea by rodarson2k · · Score: 1

      from wikipedia Phages are ubiquitous and can be found in all reservoirs populated by bacterial hosts, such as soil or the intestine of animals. ----- If they're ALREADY THERE, new ones aren't any more likely to 'mutate' like so many posters claim. All the group at MIT did was take a T7 phage (they eat ecoli - naturally) and put some code for enzymes to break down biofilms into the viral DNA. This way, the phage destroys the plaque around the bacteria while it kills the bacteria, allowing the new viruses that pop out of the dead cell to reach the next victim. Thus being '2 orders of magnitude' more efficient (99.997% instead of 99.7%) It's not even interesting science...just a good application. I don't see any call for the types of posts that i'm seeing.

    6. Re:May not be a great idea by letchhausen · · Score: 1

      Why would anyone do that when there are plenty of maggots around? Nothing cleanses a wound like maggots!

      --
      Hey, you think your house is cool?
    7. Re:May not be a great idea by hr+raattgift · · Score: 1

      Maggots don't cleanse a wound per se, they just outcompete bacteria when it comes to eating up dead tissues at the site of a wound. Sadly, the dangerous bacteria they swallow in the process are generally passed through the maggots pretty much unharmed. If the patient is lucky, the maggots get fat on their injured tissues, and the bacteria lack the energy to reproduce (bacteriostasis) or starve (bactericide). If the patient is really lucky, less-dangerous contributors to a multiple-strain infection are lysed inside the maggot, or are trapped in maggot excretions. If the patient is really really lucky, lots of opportunistically infective microbes are killed by maggot mucus which contains urea, phenylacetaldehyde, allantoin and a bunch of other antimicrobial secretions.

      Maggots are great for dealing with outer-layer necrosis; they debride wounds more completely than a surgeon could. However, maggots are useless when it comes to internal infections, whether those involve internal organs or the blood stream.

      Bacteremia (blood stream infection) is the most serious complication of infection by "biofilm" bacteria, followed by infection of the fascia or other inner-layer tissues that maggots cannot reach. However, debriding a necrotizing surface wound can reduce the liklihood of developing internal infections as a complication.

      Finally, maggots require as careful handling and management as any other tools that come directly into contact with infected people. They have to be carefully disinfected in advance. Also, they will tend to try to escape and turn into flies, at which point they can carry lots of bacteria -- including the resistant strains they were deployed against in their "youth" -- to new places and new patients. *Their* maggot offspring will not be pre-disinfected, of course.

      Flying insects of any variety in a hospital setting are BAD NEWS.

  6. Management by Shuntros · · Score: 2, Funny

    Excellent news. Now all we need is version 2.0 which is capable of removing slimey pockets of underperforming IT management.

    1. Re:Management by hondo77 · · Score: 1

      Funny but if you think about it, lousy managers will just adapt and all it takes is one to slip into an organization to start hiring and promoting other idiot managers, thus killing off the host organism (your workplace).

      --
      I live ze unknown. I love ze unknown. I am ze unknown.
    2. Re:Management by Anonymous Coward · · Score: 0

      You insensitive clod! I am a slimy pocket of underperforming IT management!

  7. More interested in the biofilms, myself by Phoenix666 · · Score: 2, Interesting

    Instead of killing off biofilms, it would be much more interesting to teach them to calcify their protein matrices either within a mold or by guided deposition to form structures useful to humans. Hello, organic technology. How cool would it be to open a pan of biofilm, pour a couple gallons of milk on it, and grow yourself a new laptop?

    --
    Do what you can, with what you have, where you are.
    1. Re:More interested in the biofilms, myself by Lehk228 · · Score: 1

      or spill some biofilm on yourself and get a new laptop where your leg used to be

      --
      Snowden and Manning are heroes.
  8. Probably pretty safe. by PIPBoy3000 · · Score: 5, Informative

    The cellular targets on bacteria are very different than those for mammals. It's uncommon for viriuses to jump species. It's even more rare to jump to another phylum. Jumping kingdoms is practically miraculous.

    The FDA has already approved bacteriophages to be used in a variety of settings, so there's probably a pretty good safety record.

    1. Re:Probably pretty safe. by apparently · · Score: 1
      The cellular targets on bacteria are very different than those for mammals. It's uncommon for viriuses to jump species. It's even more rare to jump to another phylum. Jumping kingdoms is practically miraculous.

      But that isn't taking into account that humans have a symbiotic relationship with some bacteria.
      "The microbes that live in the human body are quite ancient," says NYU Medical Center microbiologist Dr. Martin Blaser, a pioneer in gut microbe research. "They've been selected (through evolution) because they help us."

      The FDA has already approved bacteriophages to be used in a variety of settings, so there's probably a pretty good safety record.
      But FDA approval can also be done in error

    2. Re:Probably pretty safe. by xeromist · · Score: 1

      The important thing would be to make sure that these viruses couldn't persist or survive long enough to spread. Even if the virus managed to kill every bug in your gut it wouldn't be a problem as long as it was flushed out and died. Antibiotic courses can and do sterilize people's guts but the cultures eventually re-grow once the antibiotic is gone. Personally I'd rather get a virus that works like a simple antibiotic than a massive infection that affects _my_ cells.

      --
      This sig is exactly seventy characters long and a real waste of space!
    3. Re:Probably pretty safe. by Anonymous Coward · · Score: 0

      But FDA approval can also be done in error

      ad hominem

    4. Re:Probably pretty safe. by nelsonal · · Score: 1

      I, for one, welcome our kingdom hopping virus overlords.

      --
      Degaussing scares the bad magnetism out of the monitor and fills it with good karma.
    5. Re:Probably pretty safe. by Anonymous Coward · · Score: 0

      How the shit is that an ad hominem attack? Did you read the word in the New Yorker during your last dental visit and decide to randomly vomit it into your next conversation?

    6. Re:Probably pretty safe. by SatanicPuppy · · Score: 1

      View the damn parent post he's replying to, and tell me that ad hominem isn't relevant. It's fricking hilarious that an AC wouldn't be browsing at a level low enough to view other AC posts.

      --
      ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    7. Re:Probably pretty safe. by lxw56 · · Score: 1

      How would you make sure the virus didn't spread? That's why we _have_ viruses - because they spread. Now, depending on how we use them, it may be hard for them to spread, but if you can't trust a research facility to contain killer bees, you certainly can't trust an everyday user to contain a virus. Don't compare viruses with antibiotics, which do not replicate.

    8. Re:Probably pretty safe. by xeromist · · Score: 1

      The mention of antibiotics was mostly intended to point out that the destruction of symbiotic bacteria is tolerable and temporary. I wasn't advocating the use of a virus as an antibiotic course in a human. However I suspect that as this line of research progresses that someday we may see someone trying to create a virus for that very purpose. There would certainly be benefit to a virus that would only kill the infectious bacteria in a patient and not the symbiotic ones.

      As to preventing the spread of a virus I would expect researchers to explore mechanisms similar to those already found in nature. Try to engineer a quick burning virus that kills all of its hosts before it has the opportunity to spread. You would want to make sure that the virus was not resilient enough to survive long outside of controlled conditions. This may make it difficult to store for later use but would ensure that it was unlikely to spread via contact or go airborn.

      I don't have blind faith in medical researchers. I'm not going to sign up to replace their lab mice or anything. However I don't believe that an entire line of research should be abandoned because people are afraid of risks that haven't even been tested. I'd rather they tested this and found out that they can't control mutations. At least in that case we might learn something that could be used to fight a wild virus, like say HIV.

      --
      This sig is exactly seventy characters long and a real waste of space!
  9. Phage therapy by Cyberax · · Score: 1

    It's a knock-off from phage therapy ( http://en.wikipedia.org/wiki/Phage_therapy ) which is about 70 years old.

  10. Law of unintended consequences by boyfaceddog · · Score: 0, Redundant

    Have these people absolutely no common sense at all? Vegas should be booking odds about now on how many species of beneficial bateria will be wiped out when Crest-antibacterial toothpaste (R) comes out.

    --
    Here will be an old abusing of God's patience and the king's English.
    1. Re:Law of unintended consequences by Anonymous Coward · · Score: 0
  11. I used to wonder by sleekware · · Score: 1

    As a kid I used to wonder where they got that slime that you see on Nickelodeon...

  12. Ghosts... by Anonymous Coward · · Score: 1, Funny

    Lu was supported by a Howard Hughes Medical Institute predoctoral fellowship Even from the grave, Howard Hughes wages his continuing war on germs...
  13. I don't know why she swallowed a fly by slew · · Score: 1

    There was an old woman who swallowed a cow,
    I don't know how she swallowed a cow!
    She swallowed the cow to catch the goat,
    She swallowed the goat to catch the dog,
    She swallowed the dog to catch the cat,
    She swallowed the cat to catch the bird,
    She swallowed the bird to catch the spider,
    That wriggled and jiggled and tickled inside her,
    She swallowed the spider to catch the fly,
    I don't know why she swallowed the fly,
    Perhaps she'll die.

    There was an old woman who swallowed a horse,
    She's dead--of course!

    1. Re:I don't know why she swallowed a fly by Anonymous Coward · · Score: 0

      At first I didn't think your rhyme to be relevant, but the more I think of it... oooo spooky.

  14. Who added the "greygoo" tag? by Short+Circuit · · Score: 1

    "Grey goo" refers to out-of-control nanomachines, not bacterial slime...

  15. Why did I think... by Ma8thew · · Score: 1

    that this was about 'An Unfortunate Truth'?

    1. Re:Why did I think... by Anonymous Coward · · Score: 0

      I prefer Bruce Willis's "An Unappealing Hunch"

  16. Hmm... by GuldKalle · · Score: 1

    Team Builds Viruses To Combat Harmful "Biofilms"
    At first I thought that the article was about computers. That gave the headline an entirely different meaning.
    --
    What?
  17. Antibiotics by vlad_petric · · Score: 1

    Do you think that your colon bacteria (which is E. coli, btw) survives a treatment with antibiotics? I don't see how this is any different.

    --

    The Raven

    1. Re:Antibiotics by tloh · · Score: 1

      err.....
      How many slashdoters are aware of the fact that aggressive antibiotic treatments are often followed by the consumption of "pro-biotics" to restore the natural fauna in our bodies? We kill the good bugs as well as the bad bugs then we colonize ourselves with the good bugs again. Doctors and health professionals don't like to admit it, but much of modern medicine is the blind brandishing of a blunt weapon that all too often accumulates significant collateral damage.

      --
      Stay sentient. Don't drink bad milk.
    2. Re:Antibiotics by vlad_petric · · Score: 1

      I'm aware of it :) I usually consume a lot of proper yogurt after a treatment.

      --

      The Raven

  18. E. coli biofilms on food, like lettuce by The+Fun+Guy · · Score: 1
    "solutions in search of a problem"

    May I suggest that, in focusing on medical applications, you are being too narrow?

    E. coli Found Recently On Spinach: Foodborne Pathogens Hard To Remove From Produce

    All raw agricultural products carry a minimal risk of contamination, said a University of Illinois scientist whose research focuses on keeping foodborne pathogens, including the strain of E. coli found recently on spinach, out of the food supply. "Once the pathogenic organism gets on the product, no amount of washing will remove it. The microbes attach to the surface of produce in a sticky biofilm, and washing just isn't very effective,"

    Just do a search on biofilms e. coli "food safety". E. coli biofilms are hard to kill with chemicals. You have to use heat, irradiation, or some other approach like competitive exclusion, or interrupting quorum sensing or phage attack.
    --
    The man who does not read good books has no advantage over the man who cannot read them. - Mark Twain
  19. kind of related: bacteriocide strength by smellsofbikes · · Score: 1, Offtopic

    One of the things I found interesting when I was taking microbiology is the reason for 70% rubbing alcohol. More is always better, right? so they're just being cheap, giving us 70% rather than 95% concentration?
    Actually, there's a good reason for it, which is similar to what the article discusses: the material on the outside, that can protect the bacteria underneath. Pure or near-pure alcohol is so strong it coagulates the bacteria and material on the outside, forming a mostly-impermeable protective layer over the underlying bacteria, whereas 70% concentration seems to be as lethal as possible while still allowing the alcohol ready access to the interior of the protective slime layer.

    So if you're doctorin' someone up, well, don't, but if you DO, forego the everclear in favor of whiskey. (although in many locales, everclear is apparently restricted by law to 50% alcohol concentration.)

    Interesting side-note: if the alcohol burns, it's over 45% concentrated/90 proof. I don't know of a quick way to detect if it's *under* some percentage, but I suppose you could pour two shots in a tumbler, add a shot of water, and try burning it, and if it does, you're probably pretty good.

    --
    Nostalgia's not what it used to be.
  20. They gathered it by by Anonymous Coward · · Score: 0

    bukkake and then dyed it green.

    Much like Britney Speared had the Mickey Mouse Club, Paris Hilton was on "You Can't Do That on Television" and the prime pre-show "slime"-collector from the live studio audience used on the show.

  21. How much? by ivan256 · · Score: 1

    And can I spray it on the mildew on the inside of my shower curtain? Without harming my septic system?

  22. Domestication by TheLazySci-FiAuthor · · Score: 1

    We have domesticated so many animals, and done a pretty good job of it too, apparently. To me, wiping out the little-guys was never an option - there is just no way that we could hope to kill all diseases. Only by "domesticating" the harmful microbes can we hope to avoid the plagues and pandemics these germs have created in our massive and highly-connected populace. Also, as shown by this example, we can have our friendly mico-life (if a virus can be called living) remedy diseases caused by non-living entities (plaques and such).

    I see this new research both as a concrete example of exactly how far our bioengineering has come as well as a reminder of how ancient this field truly is.

    1. Re:Domestication by DirkDaring · · Score: 1

      "To me, wiping out the little-guys was never an option - there is just no way that we could hope to kill all diseases."

      I disagree. I have no doubt there will be a point in the future where you will tell a nano machine 'this is a virus' and it will go kill/remove it.

    2. Re:Domestication by TheLazySci-FiAuthor · · Score: 1

      Good point - I believe I agree with you here.

      Of course, couldn't a virus almost be considered a nano machine by itself?

  23. As a home brewer by gillbates · · Score: 2, Interesting

    Biofilms are the bane of my brew. However, this is really not needed because the current sanitizing agents work well enough to eliminate bacteria.

    My concern is that using a virus to disrupt biofilms will have much more undesirable side effects than the simple chemicals being used already. For example, I want to kill bacteria, but allow yeast to grow afterward. If I treat a fermenter with this virus, can I be sure that it won't affect the yeast in some way? I can be sure that rinsing will dilute the sanitizer enough so that it isn't a problem, but could one say the same thing of a virus? Probably not.

    --
    The society for a thought-free internet welcomes you.
    1. Re:As a home brewer by element-o.p. · · Score: 1

      But would heat sterilization before brewing kill the virus so that your yeast could ferment?

      I don't homebrew (yet -- I'd like to try it some time), so there may be a reason why you wouldn't want to sterilize with the virus then boil the equipment before brewing, but it was just a thought.

      --
      MCSE? No, sir...I don't do Windows. Yes, I am an idealist. What's your point?
    2. Re:As a home brewer by gillbates · · Score: 1

      Some things used for brewing - like plastic buckets and hoses - can't be boiled. Hence the reliance on chemical sanitizers...

      --
      The society for a thought-free internet welcomes you.
  24. On the contrary. by Poromenos1 · · Score: 1

    I clean my artificial heart every morning. It's in a glass case next to the dialysis machine, I am a bit of a collector!

    --
    Send email from the afterlife! Write your e-will at Dead Man's Switch.
  25. Latin Grammar snobbery. by SatanicPuppy · · Score: 1
    Well, since Virii is latin for "Manlinesses" or "Of Manliness", I think you're quite correct.

    The correct plural is actually Viruses; originally "Virus" was plural without a singular form, and as it was a neuter word to begin with, it's plural would have been "vira" should it have been pluralized.

    </end grammar snobbery>
    --
    ad logicam Claiming a proposition is false because it was presented as the conclusion of a fallacious argument.
    1. Re:Latin Grammar snobbery. by Alphager · · Score: 1

      Thanks, I didn't know that.
      Seems that i have picked up way too much computer-related slang, as virii is the plural of comuter-virus.

    2. Re:Latin Grammar snobbery. by dsanfte · · Score: 1

      as virii is the plural of comuter-virus.


      No, it isn't. That was the whole fucking point of the grandparent post.
      --
      occultae nullus est respectus musicae - originally a Greek proverb
    3. Re:Latin Grammar snobbery. by Jackmn · · Score: 1

      as virii is the plural of comuter-virus.
      No. 'Viruses' is the plural.
  26. Finally! by insanemime · · Score: 1

    All I read was the title. I am so glad that someone has finally created a useful virus to eliminate all the really bad films that have come out lately. What do you mean thats not what the article is about?...damn there goes my mod points..sigh..

  27. Not that I'm picking sides by benhocking · · Score: 1

    But I don't think you're allowed to play the "ad hominem" card when the previous player was responding to a blatant "appeal to authority". That said, there are valid times for "appeal to authority", but such an appeal subsequently allows for a valid "ad hominem".

    --
    Ben Hocking
    Need a professional organizer?
  28. Sadly, its not as simple as that by NIckGorton · · Score: 3, Informative

    You too are partially correct. 'Search and destroy' missions are effective at eradicating one particular bad actor - MRSA. However it does not prevent Staph infections in general since we are all swimming in a sea of Staph and Strep. So you can still get cellulitis and Staph pneumonia - however, you can treat it with rocephin instead of vancomycin (or doxycyclin, bactrim, clindamycin, macrodantin, and other antibiotics to which MRSA is still sensitive.) However 'search and destroy' does not eradicate all resistant bacteria. For example VRE (vancomycin resistant enterococcus) is more prevalent in Europe largely because there is a high rate of community carriage because glycopeptide avoparcin is used to promote livestock in Europe (but not in the US where community VRE is essentially unheard of) and promotes high levels of VRE.

    As a physician VRE scares the snot out of me more than MRSA. I treat patients with community acquired MRSA infections all the time - with oral antibiotics as outpatients. VRE is often a ticket to the ICU if not the ECU (Eternal Care Unit.)

    Moreover, while 'search and destroy' does definitely save some patients from serious illness or even death, it also likely causes serious illness or even death in those pariahs who are isolated. There is pretty good evidence that patients who are on contact or respiratory isolation get poorer quality care when hospitalized. You get less face time with the staff, are less likely to get needed procedures and tests, and are more likely to be discharged earlier from the hospital when corrected for level of severity of illness. In addition those 'profiled' for possible infection are often the sickest in the hospital anyway (dialysis patients, AIDS patients, transplant recipients, cancer patients.) So the cure in this case may be worse than the disease.

    That's not to say that both the US and Europe could do better than we are. I think a modified version of 'search and destroy' would benefit the US. However its not as simple as simply adopting one particular technique to decrease the prevalence of one particular bug. We need a comprehensive plan of attack against antibiotic resistance that is the Infectious Disease version of the Kyoto Protocol. It needs to involve comprehensive surveillance, R&D into best practices for infection control (lets start with a head to head of 'search and destroy' that doesn't just measure success by lower rates of MRSA infection, but in overall morbidity and mortality), monetary support for the implementation of such practices, immediate cessation of all antibiotics in agriculture, and R&D into the development of new classes of antibiotics (and cool stuff like TFA talked about.)

    Nick

    1. Re:Sadly, its not as simple as that by Lurker2288 · · Score: 1

      And to be fair, I didn't mention the possible subsitution effect that might be produced by broadly eliminating bacteria of a certain sort. For example, there was a paper published recently (Annals of Internal Medicine, I think) that found that since the use of Pneumococcal vaccine became common in a particular Inuit population, the overall rate of infection has decreased, but the rate of infection with a more serious serotype often requiring hospitalization has gone up. Killing off the annoying, but moderately nasty bug has opened a niche for a new, potentially nastier one to come in. There's probably still a positive offset in terms of infection prevented (particularly due to the herd effect) but it's still an unintended, harmful side effect.

      So, yeah, we're in agreement: no magic bullets for this one.

  29. Hot tubs by bill_mcgonigle · · Score: 1

    There are plenty of places you don't need a biofilm. The piping in a hot tub is one place biofilms form and are notoriously difficult to get rid of. Basically you can't - to do so would require so many gallons of bleach that you couldn't dispose of the waste.

    Jaccuzzi makes some models without tubes that you can pull the jet heads right out of their wall sockets and plop them into a bucket with a suitable bleach concentration.

    I used to do some maintenance on hot tubs - I'm not likely to ever get into a public one again.

    --
    My God, it's Full of Source!
    OUTSIDE_IP=$(dig +short my.ip @outsideip.net)
  30. Toothpaste or mouthwash by ChrisMaple · · Score: 1

    A biofilm destroyer for dental health would be a substantial boon, particularly for older folks. Many old people can't do the aggresive brushing needed to clean their teeth, because such brushing tears up their gums and the gums don't heal fast enough to recover before the next brushing. Something that destroys biofilms would make accurate, thorough brushing less important.

    --
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  31. Heat by BlueParrot · · Score: 1

    Maybe it is interesting for applications that are sensitive, but for things like food processing they really shouldn't be needed. Every bacteria I know of contains a significant amount of water. Heat it above the boiling point and the thing will die instantly. Also, if something is so hard to reach you need this, doesn't that mean your design is a bit on crack? Somebody mentioned an artificial heart. Now personally I'd rather not have an artificial virus injected into my blood system. Think a better idea might be to build the damn things to prevent this from being needed to begin with. Would probably be cheaper in the end as well. Maybe it has a few novel applications, but it really sounds like over enginnering to solve a problem the wrong way.

  32. Good for RO systems by Mspangler · · Score: 2, Interesting

    A plan we had to treat wastewater with an RO unit failed only because some sulfate-reducing bacteria kept fouling the membranes. Six days and they were completely slimed. So a slimer killing virus sounds like a great idea. And safer than crossing proton streams too :-)

    This should also be very useful for seawater RO units. At least there is a potential for a better method of slime control.

    Hope it works!

  33. Mandatory Fururama quote: by DigitalReverend · · Score: 1

    Damn! The bacteria pigged-out on the tar and now they're getting freaky-deaky, spreading Chronitons throughout our systems. We're getting younger by the minute!

    --
    I read Slashdot for the headlines, because the headlines, unlike the articles, are usually original and never duplicated