Slashdot Mirror


New Results Contradict Long-Held Chemistry Dogma

An anonymous reader writes "Researchers have found that the long-held belief that only the outer, valence, electrons of an atom interact may be false. Computer simulations have shown that at pressures like those in the center of the Earth the inner, core, electrons of lithium also interact."

37 of 316 comments (clear)

  1. Poor choice of words by Angst+Badger · · Score: 4, Insightful

    Dogma?

    If it was dogma the priests of chemistry would be denying the evidence and punishing its discoverers.

    That's the difference between science and religion. For science, new information enlarges our understanding of the world. For religion, new information only threatens sanctified prejudices.

    --
    Proud member of the Weirdo-American community.
    1. Re:Poor choice of words by LaskoVortex · · Score: 5, Informative

      If it was dogma the priests of chemistry would be denying the evidence and punishing its discoverers.

      Evidence you are not a scientist. The word "dogma" just has a different meaning from what you are used to when talking about science. To wit: "The Central Dogma". You should call up Francis Crick and tell him he was using that word wrong. Maybe they will posthumously take back his Nobel Prize.

      --
      Just callin' it like I see it.
    2. Re:Poor choice of words by Adambomb · · Score: 5, Insightful

      Scientific theories only hold out until something else comes along with more facts that change our understanding

      Right. That's called the scientific method.

      It's kinda the whole point. Do what you can with what you have where you are, and when you find out how you're wrong you adapt.

      --
      Ice Cream has no bones.
    3. Re:Poor choice of words by Anonymous Coward · · Score: 5, Informative

      500+ years ago scientists thought the earth was flat.

      No, they really didn't. Hell, over 2000 years ago the Greeks already knew the Earth was a sphere. They even knew its diameter! The idea that everyone ever thought the world was flat is entirely false - go ready a history book and stop perpetuating such garbage.

    4. Re:Poor choice of words by rangek · · Score: 5, Informative

      You should call up Francis Crick and tell him he was using that word wrong. Maybe they will posthumously take back his Nobel Prize.

      No need. Crick has already acknowledged that he really didn't understand the meaning of the word "dogma" when he used it. However, his ideas were so grond breaking that the word itself has changed/added meaning to accommodate him.

    5. Re:Poor choice of words by repapetilto · · Score: 3, Informative

      also "scientists" have known the earth to be spherical since at least the 4th century bc http://en.wikipedia.org/wiki/Flat_earth

    6. Re:Poor choice of words by RzUpAnmsCwrds · · Score: 5, Informative

      500+ years ago scientists thought the earth was flat.

      No, they didn't. It's called the flat earth myth.

      Scientific theories only hold out until something else comes along with more facts that change our understanding.

      Uh, yeah? That's the whole point of Science. Scientists try to create theories that best fit the available data. More importantly, they are always looking for new evidence which will either corroborate or contradict their theories.

    7. Re:Poor choice of words by Vornzog · · Score: 3, Informative

      'Dogma' is common in the sciences, but it implies something different than the formal definition you are thinking of. It is usually used to describe a highly simplified model of how a system works. It's just a useful way to think about something.

      The most well known example is the central dogma of molecular biology. By the time you finish freshman molecular biology in college, you know that it is a gross simplification of how a cell works, but that it is a very good first approximation.

      Chemistry is no different. The vast majority of chemical interactions involve the valence electrons. So how do you introduce the topic? You say 'all chemistry deals with valence electrons (cough, cough)'. If the students learn that, you're actually doing pretty well.

      Once you get past the basics, you admit to the students that you might have fibbed, and that under unusually high energy conditions, the inner shell electrons actually can interact. Upper level chem courses have been teaching this for years - there are no surprises here.

      All the article says is that a research group is predicting a previously unknown inner shell electron interaction under high energy conditions. While it is news, it is not shocking, and while it violates the 'dogma' that only valence electrons interact, it changes nothing about how the dogma will be taught.

      Progress in science is made at the edges. What happens to this at high energies? How will these atoms behave at extremely low temperatures? The easy cases have been understood for years, if not centuries. This discovery doesn't change any of that. So this is cool, but not a fundamental break-though.

      Now, if someone replicates this experimentally, and then figures out how to use it to make dilithium crystals to power their prototype warp drive, that'd be revolutionary.

      --

      -V-

      Who can decide a priori? Nobody.
      -Sartre

    8. Re:Poor choice of words by Vellmont · · Score: 4, Insightful


      Really? For science I rather find the more we understand, the more we realize we don't understand.

      This is true. But this also increases our understanding, not decreases it. known unknowns > unknown unknowns.

      Scientific theories only hold out until something else comes along with more facts that change our understanding.

      To a degree, yes. But a new theory doesn't usually completely obviate the old one. Newtons F=MA still works for the vast majority of the time for things us humans are likely to come into contact with, it just begins to break down as you approach the speed of light. Special relativity only becomes relevant in special cases.

      --
      AccountKiller
    9. Re:Poor choice of words by Aglassis · · Score: 3, Insightful

      Really? For science I rather find the more we understand, the more we realize we don't understand. Science is full of unexplained holes that theories postulate answers for. 500+ years ago scientists thought the earth was flat. Scientific theories only hold out until something else comes along with more facts that change our understanding. My 2 cents.

      There was a brief period after the loss of Greek natural philosophy from ~500 to ~1000 CE that some (but not all) Western natural philosophers thought the Earth was flat. Other than that, the only time that some prominent Western natural philosophers thought the Earth was flat was prior to Socrates. On the other hand, Chinese philosophers believed the Earth was flat until the 17th century.

      It is important to note that Platonic and Aristotelian natural philosophy had a significant effect on people believing that the Earth was a sphere. It is not an understatement to say that Aristotelian cosmology and its derivatives were the dominant cosmologies over the last 2,500 years of human history. And those forms of cosmology cannot work without a spherical Earth.

      This entire flat-Earth argument was invented in the 19th century to try to make it look like our ancestors were idiots during the "Dark Ages." It has been discredited many times. I strongly suggest you read this entry as well as studying Aristotelian cosmology (and how medieval scholars and clergy interpreted it) to understand how many of ancestors thought about the universe.

      --
      Suddenly, the hairy finger of a familiar monkey tapped me on the shoulder. It was time.--G. T.
    10. Re:Poor choice of words by philspear · · Score: 3, Interesting

      Indeed, there are several dogmas of science, and they are each found to be violated after a few years.

      On the central dogma of molecular biology for example, the dogma holds that DNA is transcribed into RNA, which is then translated into protein.

      With retrovirus though, it goes RNA--> DNA --> RNA --> protein, which is the most blatant violation. Regulatory RNA mollecules also violate the dogma, showing that whole protein step is non-essential.

      Given the traditional definition of dogma as something that is inflexible to the point of causing violence, I think it's good that science has started to co-opt it and prove concretely that dogmas can be violated without the general veracity of them falling apart.

      Maybe religions will take note. "Hey, the central dogma of mobio has some exceptions but still DNA gets turned into RNA and then gets turned into protein. Maybe if we admit the bread doesn't ACTUALLY become flesh, we won't all go to hell?"

      Yeah, crazy thoughts that will probably get me burned at the stake.

    11. Re:Poor choice of words by Ecuador · · Score: 3, Interesting

      Not only they knew, they had even measured the circumference of the Earth! It just drives me crazy that all this knowledge was somehow forgotten for over 1000 years... For example, even Colombus who knew the earth was round, should have also known the distance to India going the other way around, so it should be obvious to him that he found a new continent...

      --
      Violence is the last refuge of the incompetent. Polar Scope Align for iOS
    12. Re:Poor choice of words by xZgf6xHx2uhoAj9D · · Score: 4, Funny

      The knowledge wasn't forgotten. Columbus was the exception, not the rule. Everyone was telling him "Columbus, you're a dumbass. India's at least twice as far away as you think it is". You can't blame an entire time period for Columbus' fortuitous stupidity.

    13. Re:Poor choice of words by Anonymous Coward · · Score: 3, Interesting

      It's kinda the whole point. Do what you can with what you have where you are, and when you find out how you're wrong you adapt.

      Unless you're dealing with cosmology. Then, whenever your theory proves to be wrong or you observe phenomenon that it did not and could not have accounted for, you just patch up your existing theory without questioning any of the underlying assumptions and without examining alternative explanations. Or worse, you just ignore contradictory evidence.

      Gravity alone can't account for the energetic events we see? Well obviously there must be mysterious dark matter that we can assume to exist anywhere needed to save the existing theory, nevermind that this majority-of-the-universe dark matter has never been observed in a laboratory (never been observed at all actually, just assumed) or verified by experiment at all, anywhere.

      The solar wind is a moving flow of charged particles? That's the definition of an electric current, but obviously it's a strictly mechanical phenomenon!

      The inventor of magnetohydrodynamics, Hannes Alfven, admitted that he was wrong about magnetic field lines being "frozen" in plasma and proved it? Nah, let's keep using that model to describe stars anyway!

      Schwartzchild and Einstein are completely misrepresented, their results don't actually predict black holes at all, but that's okay, it sounds good so let's keep asserting that they did.

      The tiny Comet Holmes suddenly flares up to become the only object in the solar system larger than the sun? You'd think that'd be newsworthy. Well, our theories don't predict it and can't explain it, so let's make sure this extremely unusual and novel event is almost completely unreported and certainly not debated, since the "dirty snowball" model might be threatened by it. Speaking of the "dirty snowball" model, the Deep Impact mission found nothing of the sort. The comet it struck with a 300-pound copper projectile was a solid rock just like an asteroid. Nah, we don't need to question our assumptions or start trying to throw out what we thought we knew at all. How scientific.

      Cosmology right now is like Ptolomy and his epicycles, which were needed to save the geocentric theory of the solar system. Contradictory evidence was found, so he just kept patching up the old theory to foce it to get the answers needed instead of questioning whether the old explanation might be completely wrong. We think we're so sophisticated that such a thing could only happen "back then" but with this amount of hubris it can happen and is happening now.

    14. Re:Poor choice of words by Adambomb · · Score: 3, Insightful

      Well, i'm not sure where you were going with all of that.

      In any field where we cannot be reasonably certain of the tests we're doing let alone the results, it's going to involve a lot of conjecture. The scientists who refuse to say "We just don't know" are on the path to dogmatic thought not scientific thought. I would expect any field on the fringe of our knowledge to involve a lot of uncertainty and a lot of people being shown wrong....constantly. If they weren't being shown to be wrong constantly, that'd be about as likely as coding a huge project on the fly once with no debugging and have it work the first compile.

      I don't see how that aspect of human nature has any bearing on the scientific method though.

      --
      Ice Cream has no bones.
    15. Re:Poor choice of words by ericferris · · Score: 4, Insightful

      Good points. You don't really have "dogmas" in science, just hypotheses and results that you better not question because then you might piss off someone, lose you grants and be blackballed in peer reviews.

      Sadly, the peer review system does not shield scientists from flaring egos and grant sucking. It's a great system where it works, and surely beats the old ways of taunting competitors with results they couldn't reproduce as was the case during the Renaissance. But it still breaks sometimes when seniority, ego and money are involved.

      And of course, politics now play a role. Take something that should be as neutral as cosmology, namely, climate study. Now it's tainted with politics. That's rather disquieting.

      The motto of the Royal Society -- the 500-year old British academy of sciences -- is "Nullius in Verba", meaning you are not compelled by the word of someone else, only by truth. I wish it were the case.

      --
      Fantasy: http://ferrisfantasy.blogspot.com/
    16. Re:Poor choice of words by jav1231 · · Score: 3, Interesting

      Injecting some snide comment about religion into every science story on /. is getting about as bad as injecting "Bush" into...well, every other story on here. Dude, if you wanna beat-off guilt free just do it!

    17. Re:Poor choice of words by SEE · · Score: 5, Interesting

      It wasn't forgotten. The reason Columbus had so much trouble getting funding was that the royal courts of the time hadn't forgotten; they used Eratosthenes' old number (confirmed by the astrolabe), and then accepted Ptolemy's assessment that it was 180 degrees from one end of Europe to the opposite end of Asia. They knew there was no way that Columbus could reach Japan from the Canaries, 12,000 miles away, without running out of water (no ship of the era was big enough to carry enough for a trip of that length). So advised against giving him money, no matter how much Columbus insisted it was only 2,300. As it was, the reason why the terms of his contract with Fredinand & Isabella was so generous is that everyone expected him to die on the trip rather than make landfall.

      And Columbus wasn't ignorant of Eratosthenes' number and Ptolemy's estimate; it was simply that he reached his error based on a different set of authorities:

      1) That of Marinus of Tyre (from the first century AD), who thought that Eurasia was 235 degrees in width instead of about 180.
      2) The measurement of Alfraganus that underestimated the size of a degree somewhat.
      3) His own mistake of assuming that Alfraganus's mile was the same length as an Italian mile (which were 2/3rd the size).

      Based on those numbers, it was perfectly reasonable to believe he'd reached Asia.

    18. Re:Poor choice of words by KDR_11k · · Score: 3, Informative

      The catholics use the bible as some sort of starting point for their dogma but the exact rules are set by the leadership, not the book (and are often mutable). The protestants are the ones who follow only the book (of course different groups follow it in different ways...). That's where the big division came from.

      --
      Justice is the sheep getting arrested while an impartial judge declares the vote void.
    19. Re:Poor choice of words by The+Wannabe+King · · Score: 4, Interesting
      The knowledge that the earth was round lasted through the dark ages too. When Columbus was laughed at by the church' experts, they didn't point out that the world was flat, but that Columbus used a too small value for the circumference of the earth. Therefore he would starve to death before reaching Asia. They were right, Columbus was just very lucky to hit America before it happened.

      Generally, the dark ages weren't nearly as dark as historians from the 19th century depicted it to be.

    20. Re:Poor choice of words by William+Ager · · Score: 5, Informative

      Oh dear... as someone said already, I expect this is probably an electric universe rant, and that responding to it will do almost nothing. I could moderate it down, but other mods probably wouldn't understand my reasons for doing so, as the parent avoided mentioning the crackpot theory itself.

      It should be said, however, that the odd thing about the dark matter predictions are that they work very well, as do the dark energy predictions. We did many have other models that were put forward, some containing significant changes to various theories. None of them worked nearly as well as our current model with dark matter. There are many people in the community that don't like our lack of knowledge about dark matter, but it works so well that, as with many things in high energy physics, we can only assume that it is actually there until we come up with a better theory.

      As for black holes, I would suggest that you actually learn modern GR before suggesting that you understand the theory better than everyone else in the community does. In fact, try learning real cosmology, and looking at results like measurements of CMB anisotropy, and Big Bang nucleosynthesis.

    21. Re:Poor choice of words by Goaway · · Score: 3, Insightful

      If science weren't dogmatic, there would be organizations and grants who would say "yeah we don't really think this Electric Universe idea is true, but let's devise ways to put it to the test anyway".

      That is because there is nothing to test. It's up to the electric universe people to come up with actual, verifiable experiments. But they don't do that, they just make vague claims and complain about conspiracies against them.

  2. arXiv link by Hal-9001 · · Score: 5, Informative

    For anyone who wants to read the actual paper: http://arxiv.org/abs/0805.2781

    --
    "It take 9 months to bear a child, no matter how many women you assign to the job."
  3. Valence != Outer Core by FST · · Score: 5, Informative

    Just because an electron is in the outer "core" doesn't mean it's a valence electron. Similarly, the converse is also true. As IUPAC put it, the number of valence electrons is equal to "the maximum number of univalent atoms (originally hydrogen or chlorine atoms) that may combine with an atom of the element under consideration, or with a fragment, or for which an atom of this element can be substituted." This still holds true for the interactions in question in TFA.

    --
    46487 466780 252994 376409 96920 39622 205366 244315 622115 512361 668040 63608 259203 955314 811176 652718 166330 23922
  4. Thats why by eille-la · · Score: 3, Funny

    Aahhh, that's why all the experiments I made while standing in the center of the earth sometime failed!

    1. Re:Thats why by ScrewMaster · · Score: 5, Funny

      No, they failed because, as everyone knows, the center of the Earth is actually hollow, contains a breathable atmosphere, and is full of prehistoric creatures.

      --
      The higher the technology, the sharper that two-edged sword.
  5. Sensationalist Bullshit. by Cadallin · · Score: 4, Informative
    Standard for "Science Journalism." The result is actually far less earth-shattering than the author is trying to portray. Researchers think they have found a set of conditions in which the usual models used in chemistry don't apply anymore.

    Now that's a fucking shocker. Most Chemistry today focuses on conditions either similar to STP or than can be created within STP. STP is "Standard Temperature and Pressure" Usually defined for the purpose of convenience of communication as 298K and 760 Torr. They define this as "standard" because everybody in Chemistry knows that chemistry changes as you change conditions, and it's useful to have a standard to compare to, even an arbitrary one (298K, 760 Torr is "average" sea level temperature and air pressure). The standard is also very useful for Chemical Engineering.

    The article is poorly written garbage.

  6. Goes against chemistry dogma? by MagusSlurpy · · Score: 5, Insightful

    High-pressure reactions are an almost completely unexplored aspect of chemistry; and the research that has been done shows that atoms and molecules behave much differently under high pressures. For example, a lot of research is being done now utilizing ultra-high pressure water as a replacement for organic solvents, for greener chemistry. If there's one thing we've learned from these high-pressure experiments, it's that everything acts different, so it really doesn't go against our "dogma" at all; it just goes against the "dogma" of STP reactions, which makes sense, as this was not an STP reaction. It's an incredibly cool finding; just not something that's going to turn all of our current chemical understanding upside down by violating "dogma."

    --
    My sister opened a computer store in Hawaii. She sells C shells by the seashore.
    1. Re:Goes against chemistry dogma? by JustinOpinion · · Score: 5, Informative

      For example, a lot of research is being done now utilizing ultra-high pressure water as a replacement for organic solvents, for greener chemistry.

      I think you mean ultra-high pressure carbon dioxide, not water. Supercritical CO2 is indeed an interesting area of research, as it can be used to replace dangerous organic solvents, making industrial chemistry safer and greener.

      And I agree that there is likely a rich unexplored landscape of interesting chemistry beyond standard temperatures and pressures.

  7. core correlation by rangek · · Score: 5, Informative

    Chemists already know that core electrons do influence bonding and such. It is simply a short cut to ignore them. Hence, when one wants to get the last few digits on your answer you turn on "core correlation" which treats the core and valance regions the same.

    Furthermore, the conditions in question here are so extreme as to border on being a plasma or some such. So I am not really surprised to see some effect that are negligible under "normal" conditions to grow and become important.

  8. Re:Of course! by 4D6963 · · Score: 4, Funny

    Computer simulations?

    You mean like the computer simulations that say the earth is warming? Hahahaha...

    Indeed. Between your intuition and computer simulations running on super-computers based on decades of research on predictive models designed by the most competent and dedicated researchers in the domain, always trust your intuition.

    This is why I never watch the weather channel, I just look at how leaves move in the wind, how menacing clouds look, then I wet my pointer finger, put it in the air and I can tell you how the weather will be tomorrow. Well I can tell what it will be, doesn't mean I turn out to be right, but hey, the Weather Channel is wrong sometimes too!

    --
    You just got troll'd!
  9. Interesting results, but by shadowofwind · · Score: 4, Informative

    was any 'dogma' really overturned? My understanding was always that the basic chemical rules were first order approximations, not a comprehensive description of how everything must behave. For example, xenon is an 'inert' element, with the outer shell full, but xenon tetra-fluoride (XeF4) is a stable compound. I learned that in high-school in the 1980's.

  10. "It leans far left and toward science" by MillionthMonkey · · Score: 4, Insightful

    For supposedly trying to be neutral, a lot more posts negative of religion or the right get modded up.

    Who promised you "neutrality"? Good posts that are negative of religion or the right are just easier to write. You see more of them modded up because more of them are posted.

    Instead of whining that everyone is biased, why don't you just mod up posts you agree with if you don't like it, or start writing posts "positive of religion or the right" that are actually insightful or interesting?

  11. Not news. by FlyingBishop · · Score: 3, Insightful

    Chemistry's rules exist because they functionally explain chemistry in an accessible manner. Physicists have known that there are more accurate models for a while. Unfortunately, these models are too complex to be useful to someone trying to synthesize a chemical. If this has any significant applications, we will still be seeing classical chemistry for at least a century to come (barring the singularity.)

    I mean, it's been almost a century since relativity and quantum mechanics came on the scene, but for the majority of engineering tasks, they remain useless. Between processors hitting the atomic scale and more probes hitting the atmosphere, that may change. However, I don't see chemistry getting to the point where we even begin to see practical chemistry that doesn't rely on classical models. The new ones are simply to complex to use.

  12. Electron-Nucleus Interactions by Graff · · Score: 5, Informative

    IAAC (I am a chemist)

    Honestly this result is not unexpected. The interactions of electrons and nuclei depend on several factors: distance, energy, and charge. There is also the factor of election-electron interaction, which is where the idea of valence electrons comes about.

    Normally the outermost electrons of an atom are far enough from the nucleus that the distance from the nucleus and the repulsion from the other electrons on the atom allows them to more easily interact with other atoms. This is how bonding works, an electron gets "shared" between two atoms or the electron completely jumps off the atom and turns the atom into an ion which is attracted to other, oppositely charged, ions. Yes, I'm oversimplifying quite a bit for the layman.

    Every electron in an atom can interact with another atom, it's just MUCH less likely to happen for the inner electrons of an atom and the interactions of the inner electrons to other atoms are much weaker than those of the outer electrons. Increasing the pressure allows the inner electrons to interact more strongly with other atoms.

    Under higher pressures and energies two things happen. First of all atoms are pressed closer to each other. This means that all of the electrons are closer to other atoms. This increases the likelihood that an electron will interact with another atom, forming a bond. The second effect is that the increased energy tends to cause the electrons in atoms to jump to higher energy states which are further out from that atom's nucleus. This means less crowding which means less repulsion from other electrons which means that each atom's nucleus is more exposed to interaction with other atom's electrons. Again, I'm oversimplifying for the layman.

    The extreme of this is when the pressure is great enough that each nucleus gets close enough for the nuclear force to overcome the electrostatic repelling force between the two positively charged nuclei. When this happens you get neutronium, the core of a neutron star. Obviously you don't normally see these levels of pressure on Earth!

    What is really in question is the exact numbers of the interactions. At what pressure does a certain phase of atom to atom interaction appear? How does the increased pressure affect rates of reactions between atoms? Scientists are trying to measure hard numbers of the effects of pressure on chemistry. There already is a good deal of theoretical work but the experimental work is a bit tough to do given the conditions needed.

  13. Re:Proof that Proof isn't Always Right by plasmacutter · · Score: 4, Interesting

    For instance, you can scientifically prove that God doesn't exist all you want given the small amount of information we know about our universe.

    well, we know where you get your bias against science.

    Science tries to prove testable positives. You know a theory is "wrong" if the observations don't match the hypothesis. Even then, it doesn't necessarily mean the theory must be completely disregarded (example: newtonian and quantum mechanics coexist today).

    You can't "disprove" god with science because god is not rationally testable. You can't "prove" it either because of that, though, and as such no man of science will accept "the will of god" as an explanation for something, or a reason to perform/avoid certain actions.

    --
    VLC FOR MAC IS DYING! IF YOU DEVELOP, PLEASE SAVE IT!!
  14. Re:Proof that Proof isn't Always Right by Shados · · Score: 3, Informative

    you can scientifically prove that God doesn't exist

    No, you cannot. Its impossible to show scientifically that anything doesn't exit. You can just show that something actually does exist. Thats why we were able to prove that, under condition XYZ, only valance electrons react. As long as we didn't test it in every possible scenario (and even then, we cannot prove that there aren't any other possibility), we cannot say that there aren't some ways where that theory doesn't hold. And as this showed, there was a scenario we hadn't tested.

    Scientists (real ones) will never say that its impossible for God to exist. They'll just say that all of the currently provided evidence are bogus, and that there isn't any valid theory that shows its existance beyond wishful thinking by a few zealots. Doesn't change that God may exist. We just have nothing to lead us to think it does.

    If some scientist claims to be able to prove that it doesn't exist (or that ANYTHING ELSE doesn't exist), they're doing faux-science.