Mutations Helped Humans Survive Siberian Winters
sciencehabit writes "Researchers have identified three genetic mutations that appear to have helped humans survive in the frigid climate of Siberia over the last 25,000 years. One helps the body's fat stores directly produce heat rather than producing chemical energy for muscle movements or brain functions, a process called 'nonshivering thermogenesis.' Another is involved in the contraction of smooth muscle, key to shivering and the constriction of blood vessels to avoid heat loss. And the third is implicated in the metabolism of fats, especially those in meat and dairy products—a staple of the fat-laden diets of Arctic peoples."
I can do the same thing with Rockstar and CHEETOS.
I can think of one trillion-dollar industry that might be interested in knowing how to cause 'nonshivering thermogenesis' in fat cells on demand...
It's clear from the story, that UCP1 and UCP3 would give them an unfair advantage!
I read a theory once that I found interesting: that arterial plaque is a legacy of survival in an ice age or in an extremely cold environment like Siberia.
Here's how it goes, from memory: Humans get antioxidants from plants, but in extreme conditions plants were less available and humans may not have gotten enough antioxidants. Absent the antioxidants, free radicals posed a greater health risk.
Arterial plaque provided some defense against the deleterious effects of the free radicals, and helped the humans survive the freezing times... long enough to reproduce. Maybe in middle age the hardening of the arteries had deleterious effects of its own, but evolution is all about what helps reproduction, not so much what helps the individual live to a ripe old age.
This sounds sort of plausible but I don't have the background to evaluate it. It could also be one of those "wet streets cause rain" theories that invert cause and effect... is arterial plaque not the body's defense against free radicals but simply damage caused by them?
Mutations helped people survive. (- that is a period)
That fat chick is really hot!
(I'm sorry. One day these cries for help will be heard by the right people.)
Lactase persistence into adulthood is a relatively recent, as you speculated, and is thought to have been introduced approximately 10,000 years ago. For a nice overview, you can peruse:
D. M. Swallow, "Genetics of lactase persistence and lactose intolerance", Ann. Rev. Genet., 37: 197-219, 2003
E. J. Hollox, M. Poulter, M. Zvarik, V. Ferak, A. Krause, et al., "Lactase haplotype diversity in the Old World", Am. J. Hum. Genet., 68: 160-172, 2001
M. Slatkin and G. Bertorelle, "The use of intraallelic variability for testing neutrality and estimating population growth rate", Genetics, 158: 865-874, 2001
M. Slatkin, "Balancing selection at closely linked, overdominant loci in a finite population", Genetics, 154: 1367-1378, 2000
J. Metneki, A. Czeizel, S. Flatz, and G. Flatz, "A study of lactose absorption capacity in twins", Hum. Genet., 67: 296-300, 1984
G. Flatz, "Gene dosage effect on intestinal lactase activity demonstrated in vivo", Am. J. Hum. Genet., 36: 306-310, 1984
T. Sahi, "The inheritance of selective adult-type lactose malabsorption", Scand. J. Gastroentrerol., 9: 1-73, 1974
G. Flatz and H. W. Rotthauwe, "Evidence against nutritional adaption to tolerance to lactase", Humangenetik, 13" 118-125, 1971
1. Just like the article says and unlike the Slashdot summary suggests, shiver-free thermogenesis is old and all mammals share it.
2. The researchers found traces of positive selection in a gene involved in shiver-free thermogenesis.
3. How do you look for traces of selection? A mutation in a DNA fragment coding for a protein can have two effects: either it changes the corresponding amino acid in the protein sequence (non-synonymous mutation), or it does not (synonymous mutation). This is because genetic code is redundant and different codons code for same amino acids, so a change from one codon to another does not have to change the protein. Synonymous mutations are assumed to be neutral for evolution (although they are not, not always).
Now, if you look at many possible variants of a gene and collect many different mutations, you can calculate whether the ratio of non-synonymous to synonymous mutations (called the dN/dS ratio) is (i) higher (ii) lower or (iii) quite like expected. Depending on the outcome of the test, you can say:
- if it is higher than expected, then there is a positive selection force at work (the gene is pushed towards change)
- if it is lower than expected, then we have a case of purifying selection; the gene is being actively maintained as it is, and any non-synonymous mutations are being removed from the population
- if it is neither lower nor higher, the gene is just not important
4. So, nice, you found that a gene related to non-shiver thermogenesis shows traces of positive selection. So what?
The answer is, not much. You do not always know which mutation was the one being selected. And even if you can pinpoint it, very often you will not be able to say what it actually does. So fine, you have a leucine replaced by arginine at position 186 in a protein chain; you might be able even to model the new sequence and see a delicate shift in the structure of the protein. How does it relate to the protein function? What has been modified or improved? No idea.
5. OK, why is that important? It is important because much of the genetic variability of the humans that we know is thought to have been fixated by genetic drift and other neutral evolutionary effects (like surfing the wave of colonization) - rather than selection. There are few examples of selection known. Light skin is one of them, and is thought to be an adaptation to the vitamin D deficiency caused by lack of sun at high latitudes. Mutation that keeps lactase being produced throughout life is another one. There were independent (convergent) events in both cases, by the way.
Look, humans are special. Special in the sense that humans are genetically extremely uniform, and the genetic differences between, say, native Australian, a blond-haired, blue-eyed Swede and a member of the Mbuti people from Africa are all together much smaller than between two chimpanzee individuals from groups living a few hundred kilometers apart. And moreover, these few mutations specific for some people but not for other seem to be more or less neutral in their character.
Finding differences that are *not* neutral, that are actually doing something is therefore an interesting thing. Notably, the few existing differences like that are linked to mundane things like metabolism or immune response (yes, some people are special because they don't fart after drinking milk, how is that for a superior race), and not, for example, to cognitive and brain development. The latter differences are found between humans and other primates.
It wouldn't surprise me if I had one or more of these mutations.
I find temperatures above 21C unpleasant. In December, I slept a couple nights in -25 temperatures in a -12 rated sleeping bag and was perfectly comfortable. I rarely wear a jacket above 0. I've taken a 45 minute casual swim in 10 water in nothing but shorts and felt a little chilled but fine (though it was sunny).
But I pay for it in the summer. Once it hits 23 my brain slows down. Around 26 it completely shuts off. I've experienced temperatures up to 40, but I'm glad those days are rare.
It's easy for me to overheat. I went on a winter hike in -15 weather and ended up getting moderate hypothermia -- because I left dressed in a "normal" amount of winter wear and sweat my clothing through. I was steaming. Thankfully I had a change of clothes, and two hours in a -7 sleeping bag got me warmed back up to normal.
People think I'm weird for enjoying -30. But I'd much rather have that than 30. I still find it odd that much of the world lives in near-constant 30 and find those high temperatures comfortable.
Be relentless!
It is off topic, but the ability to digest lactose as adults evolved somewhere between 5,000 and 10,000 years ago. The greatest ability to digest lactose as adults is clustered in the Arabian peninsula, southern Iran and Pakistan, far western Africa, and northern Europe (southern Scandinavia, Iceland, Ireland, Great Britain, Denmark, northern Germany, and northern France). I couldn't tell you though if the genetics are the same but it seems unlikely given the geographical clustering.
More on topic it is obvious that some people can take cold better than others. I remember as a kid going ice fishing with my (100% Swede/Finn) dad and he was perfectly comfortable out on the ice at -20 F with a 20 mph wind and no comforts save a metal bucket to sit on, overalls, and a thermos of coffee. He didn't even need gloves and wasn't at all cold after eight hours on the ice. Now I wasn't as cold tolerant as my dad but still I remember going on trips to the northern Cascades in winter being perfectly comfortable wearing jeans and a t-shirt while my mostly northern European comrades were shivering in full on ski gear. While body fat helps a lot neither me nor my dad have ever been more than average weight for our heights; a family trait going back at least four generations is being severely underweight until our early 30's. I ate four meals a day and graduated high school 5'9" tall while weighing just 105 pounds and that's typical for my family. Instead of packing on pounds we seem to just spew out body heat and probably have more active forms of the genes listed in TFA.
Brown adipose tissue
It is off topic, but the ability to digest lactose as adults evolved somewhere between 5,000 and 10,000 years ago. The greatest ability to digest lactose as adults is clustered in the Arabian peninsula, southern Iran and Pakistan, far western Africa, and northern Europe (southern Scandinavia, Iceland, Ireland, Great Britain, Denmark, northern Germany, and northern France). I couldn't tell you though if the genetics are the same but it seems unlikely given the geographical clustering.
Yes, it is the same mutation you are talking about. The associated mutations (or "snips", SNP -- single nucleotide polymorphisms) are all the same, even in the West African tribes, and are thought to be of a common origin.
However, there actually is a known case convergent evolution of lactase persistence, fully described in this Nature Genetics paper: http://www.nature.com/ng/journal/v39/n1/full/ng1946.html . The authors analysed genotypes of East African pastoral tribes where lactase persistance is also widely spread, and found several alternative mutations in the same regulatory region. The most common of these mutations is thought to be ~ 7000 years old.
Lactase nonpersistence is the ancestral state, and lactase persistence only became advantageous after the invention of agriculture, when milk from domesticated animals became available for adults to drink..... http://x.co/sfIC
Agriculture is absolutely not required for milk to become available for adults to drink.
Animal husbandry is required and you find that in many nomadic, non agricultural, societies.
In the free world the media isn't government run; the government is media run.
... would be for body fur/hair to re-emerge? I wonder why this didn't happen? Ok , obviously they're wearing clothes and had fire but if you're STILL cold even with that assistence then surely having more body hair would help you keep warmer? Yet the asian peoples including those in siberia are LESS hairy than other races. Strange.
How many will it take to shut people like you up?
You can father a child with any female individual from one of these groups and that offspring will be able to breed with any of the people in our world, so on and so forth. Of course there will be genetic variants expressed. That is normal and desirable in any population - we really need more diversity and mixing, not less. As a species we need as much opportunity to recombine genetics in favorable ways as possible (with inevitable unfavorable combos happening occasionally as well).
Any other approach would be regressive, prone to conserving bad mutations over good (6 fingers sound familiar?) and generally irresponsible.
A fool throws a stone into a well and a thousand sages can not remove it.