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Specialized Knoppixes for Fun and Profit

An anonymous reader writes "The University of Puerto Rico High Performance Computing facility (HPCf) and the Puerto Rico Biomedical Research Infrastructure Network (BRIN-PR) are pleased to announce the release of bioknoppix. bioknoppix is a live CD linux, based on KNOPPIX, and specialized to include tools for bioinformatics. bioknoppix does not need to be installed on your computer, making it a perfect tool for workshops and demos. Some of the software included in the 0.3 release: EMBOSS 2.8.0, jemboss, artemis, clustal, Cn3D, ImageJ, BioPython, Rasmol, Bioperl, Bioconductor. For more information please see the bioknoppix home page." Reader Tussinator wrote in about a new release of ClusterKnoppix.

13 of 198 comments (clear)

  1. Specialization by firstadopter.com · · Score: 5, Funny

    The specialization of Linux continues. Soon we'll have linux for people born in february, Linux for spider lovers, linux for travelers..

    1. Re:Specialization by LostCluster · · Score: 5, Insightful

      Linux is Linux. It doesn't really change from use to use. What we're seeing is specialization of the packages that include Linux...

  2. It's alive? by Anonymous Coward · · Score: 5, Funny

    That was to be expected sooner or later, the linux kernel turning conscious. I for one welcome our new live CD linux overlords.

  3. just what the doctor ordered by freeJustin · · Score: 5, Interesting

    Wow, I'm a bioengineering major and I cant stress how useful this is, it like almost every computer in our lab has a different function due to software problems. After looking at the applications that are on the disc, I bet this well be big in schools. I wonder if they have considered doing this for other fields...

  4. Going back in time? by LostCluster · · Score: 5, Insightful

    I remember when in the days of Windows 3.1 and MS-DOS using specialized boot disks when running certain games to load only the system files that were needed for the game, no more and no less.

    It seems like this is the concept that is coming back into style here. Optimize a boot-off-CD operating system to be sure that all the applications you need are installed properly, and as soon as you're booted you have everything all set up. It's great for assuring that you know everything that's running on the PC you're working with, and that there's no extra stuff lurking in the background... even if you've never met the PC before.

    1. Re:Going back in time? by bmsleight · · Score: 5, Interesting
      This is just what Morphix allows you to do. It basically takes away the hard work of re-mastering a Knoppix CD.

      Morphix is modular, and can be adapted with less effort

      The base, the Knoppix part contains the kernel, kernel modules, hardware detection, etc. This base is left untouched. You can either a change a mainmod or add lots of minimodules.

      The are four basic images to start off with. So making you own LiveCD is much easier.

      It even possible to save you files, configuration and setting to the Morphix CD you using, ready for next boot up.

      Did I mention the GUI installer ...

      Brendan

  5. Re:Hey! by LostCluster · · Score: 5, Interesting

    Actually, having Knoppix around might actually slow the spread of worms. Afterall, you can't change the executable files on an already-finished CD, and therefore any exploit somebody manages to get running will be gone as soon as the system reboots.

  6. plurals by the+eighth+grader · · Score: 5, Funny

    shouldn't that be "knoppices"?

  7. Bioinfomatics Monoculture by Mr.+Darl+McBride · · Score: 5, Funny
    This kind of bioinformatics monoculture can only mean bioinformatics security problems ahead.

    As more and more bioinformatics parties switch to a single biostandard distribution, this leaves bioroom for bioinformatics worms to biospread unchecked.

    It's bioestimated that it would take only three biodays for a bioworm to biospread itself enough to bioDDoS an bioinnocent biostandar with as biomany as three biodozen biomachines, bioleaving biotelnet biosomewhat biolaggy.

  8. LiveCDs in the enterprise? by Pantheraleo2k3 · · Score: 5, Insightful

    Think about this. You make a custom liveCD, debug it, then deploy it on your Linux boxen. The boxes don't need HDDs, you could store user data on a network server. Even if a luser tries as hard as they can to mess it up, it's all fixed with a reboot. You could make different liveCDs for different departments with the proper apps installed (e.g. OpenOffice, payroll, accounting, sales, CRM, etc)

    Anyone ever consider this?

  9. Knoppix remastering made easy. by khasim · · Score: 5, Informative

    http://www.knoppix.net/docs/index.php/KnoppixRemas teringHowto

    Build it the way you want and burn it!

    Don't forget to grab an inexpensive USB memory toy and you have it all!

  10. Bio... by sw155kn1f3 · · Score: 5, Funny

    > BioPython, Rasmol, Bioperl, Bioconductor. For more information please see the bioknoppix home page.

    Yes, but can you build biowulf cluster of these ?

    --
    - Arwen, I'm your father, Agent Smith.
    - Well, you're just Smith, but my father is Aerosmith!
  11. It's Knoppixe by Anonymous Coward · · Score: 5, Informative

    Sorry to put you down. But my vote, as native german speaker, goes to "Knoppixe".
    The "e" is pronounced as a schwa vovel. Plus the "K" is not silent!