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Open Source Software Meets Do-It-Yourself Biology

destinyland writes "This article profiles a growing movement — DIY biology — that's made possible in part by open source tools. Using programs like BioPerl and BioPython, DIY biologists write their own code (computer and genetic), designing their own biological systems and altering the genome. A protein-folding simulator, Folding@home, is now the most powerful distributed computing cluster in the world, and as the movement evolves, cooperatives are also springing up where hobbyists pool resources and create 'hacker spaces' to reduce costs and share knowledge. 'As the shift to open source software continues, computational biology will become even more accessible, and even more powerful,' this article argues — while intellectual property and other bureaucracies continue to hobble traditional forms of research."

10 of 113 comments (clear)

  1. Uhhh... by Monkeedude1212 · · Score: 4, Funny

    DIY Biology sounds pretty dangerous.

    As long as the instructions it comes with are better than Ikea's...

    1. Re:Uhhh... by Hatta · · Score: 2, Funny

      "Put tab A into slot B" is really all you need to know anyway.

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    2. Re:Uhhh... by Hurricane78 · · Score: 3, Funny

      Excuse me. In our days, we used to call that any of:
      - Sex
      - Pregnancy
      - Having mold in the bathroom/basement/etc.
      - Growing your own food.
      - Brewing your own beer / making your own cheese/salami/etc.
      - Letting the dog lick your face.
      - Actually eating the sand-cake that you made in the sandbox where the dogs used to poop.
      And we lived with it! (Not in that order, though. ;)

      The youth today. A bunch of bubble boys in fear of the world.
      Now get off my lawn!

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  2. Distributed Cluster by Anonymous Coward · · Score: 0, Funny

    ...Folding@home, is now the most powerful distributed computing cluster in the world...

    A Distributed Cluster? *Head Asplode*

  3. DIY?? by metamechanical · · Score: 4, Funny

    Do it yourself biology??

    I prefer "do it with someone else" biology...

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  4. Hurray great article! by Vamman · · Score: 2, Funny

    Awesome article. Our team has embraced the use of the R Stats package in our environmental assessment tool. We were sick of the COM object library to connect modern .NET tools to our tool so I decided to build a .NET wrapper for R. Still in early development but it works for us. We decided to release it under GPL for everyone to use. I think the title of article could read something like "Biologists take programming into their own hands" which is what I was forced to do during my MSc. and now once again in my position at U of S I find myself hanging out with the computer scientists a little bit too often.

  5. Dammit by JustNiz · · Score: 2, Funny

    From the title I was looking forward to the news that I could DL the opensource software, get my PC hooked up to a robot arm and a webcam, and have it do my appendectomy.

  6. i like cooperative do-it-yourself biology by circletimessquare · · Score: 2, Funny

    sadly, i mostly encounter uncooperatives

    this leads to do-it-by-yourself biology

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  7. Been doing that by edrobinson · · Score: 1, Funny

    The wife and I have been doing DIY biology for years and we have 3 kids and 3 grandkids to show for it.

  8. The open source flu by geekoid · · Score: 2, Funny

    coming to a upper respiratory near you.

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