Domain: plos.org
Stories and comments across the archive that link to plos.org.
Stories · 75
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Mushroom-Like Deep Sea Organism May Be New Branch of Life
jones_supa writes: During a scientific cruise in 1986, scientists collected organisms at water depths of 400m and 1,000m on the south-east Australian continental slope, near Tasmania. But the two types of mushroom-shaped organisms were recognized only recently, after sorting of the bulk samples collected during the expedition. A team of scientists at the University of Copenhagen says the tiny organism does not fit into any of the known subdivisions of the animal kingdom. The organisms are described in the academic journal PLOS ONE. The authors of the paper recognise two new species of mushroom-shaped animal: Dendrogramma enigmatica and Dendrogramma discoides. Measuring only a few millimeters in size, the animals consist of a flattened disc and a stalk with a mouth on the end. One way to resolve the question surrounding Dendrogramma's affinities would be to examine its DNA, but new specimens will need to be found. The team's paper calls for researchers around the world to keep an eye out for other examples. -
Major Scientific Journal Publisher Requires Public Access To Data
An anonymous reader writes "PLOS — the Public Library of Science — is one of the most prolific publishers of research papers in the world. 'Open access' is one of their mantras, and they've been working to push the academic publishing system into a state where research isn't locked behind paywalls and subscription services. To that end, they've announced a new policy for all of their journals: 'authors must make all data publicly available, without restriction, immediately upon publication of the article.' The data must be available within the article itself, in the supplementary information, or within a stable, public repository. This is good news for replicating experiments, building on past results, and science in general." -
Scientists Using Supercomputers To Puzzle Out Dinosaur Movement
Nerval's Lobster writes "Scientists at the University of Manchester in England figured out how the largest animal ever to walk on Earth, the 80-ton Argentinosaurus, actually walked on earth. Researchers led by Bill Sellers, Rudolfo Coria and Lee Margetts at the N8 High Performance Computing facility in northern England used a 320 gigaflop/second SGI High Performance Computing Cluster supercomputer called Polaris to model the skeleton and movements of Argentinosaurus. The animal was able to reach a top speed of about 5 mph, with 'a slow, steady gait,' according to the team (PDF). Extrapolating from a few feet of bone, paleontologists were able to estimate the beast weighed between 80 and 100 tons and grew up to 115 feet in length. Polaris not only allowed the team to model the missing parts of the dinosaur and make them move, it did so quickly enough to beat the deadline for PLOS ONE Special Collection on Sauropods, a special edition of the site focusing on new research on sauropods that 'is likely to be the "de facto" international reference for Sauropods for decades to come,' according to a statement from the N8 HPC center. The really exciting thing, according to Coria, was how well Polaris was able to fill in the gaps left by the fossil records. 'It is frustrating there was so little of the original dinosaur fossilized, making any reconstruction difficult,' he said, despite previous research that established some rules of weight distribution, movement and the limits of dinosaurs' biological strength." -
PubMed Commons Opens Up Scientific Articles To User Comments
New submitter smegfault writes "In a new trial, PubMed Commons has been released. Until now, post-peer-publication results were restricted to letters to the editor of scientific journals; and even then some journals don't accept letters to the editor. With PubMed Commons, scientific peers can comment on PubMed-indexed articles without the interference of journal editors and peer reviewers. At the moment, eligible for participating are: 'Recipients of NIH (US) or Wellcome Trust (UK) grants can go to the NCBI website and register. You need a MyNCBI account, but they are available to the general public. If you are not a NIH or Wellcome Trust grant recipient, you are still eligible to participate if you are listed as an author on any publication listed in PubMed, even a letter to the editor. But you will need to be invited by somebody already signed up for participation in PubMed Commons. So, if you have a qualifying publication, you can simply get a colleague with the grant to sign up and then invite you.' However, reports are in that anyone with a PubMed / NCBI account can sign up on the PubMed home page." -
California Bill Would Mandate Open Access To Publicly Funded Research
ectoman writes "This week, advocates of open access to publicly funded research are keeping an eye on California's Taxpayer Access to Publicly Funded Research Act (AB 609), which could soon find its way to the California State Senate. The bill requires the final copy of any peer-reviewed research funded by California tax dollars to be made publicly accessible within 12 months of publication. If passed, the legislation would become the first state-level law mandating this kind of access. Opensource.com is featuring a collection of articles on open access publishing, which you can read while you await the verdict on AB 609." -
The Real Reason Journal Articles Should Be Free
Bennett Haselton writes "The U.S. government recently announced that academic papers on federally-funded research should become freely available online within one year of publication in a journal. But the real question is why academics don't simply publish most papers freely anyway. If the problem is that traditional journals have a monopoly on the kind of prestige that can only be conferred by having your paper appear in their hallowed pages, that monopoly can easily be broken, because there's no reason why open-access journals can't confer the same imprimatur of quality." Read on for the rest of Bennett's thoughts on the great free-access debate.Around the time of the tragic suicide of Aaron Swartz, who lobbied tirelessly for free access to academic articles (in his sometimes grey-hat manner, which ultimately got him in trouble), I admitted to some friends that I didn't understand how this became a problem. Why aren't all journal articles free, all the time?
I don't mean that I didn't know why the journal publishers charged exorbitant fees for their subscriptions. If academic researchers have to have access to journal articles in order to do their jobs, then you can expect the journals to gouge academic libraries on the prices. What I didn't understand was: Why do academics even publish in journals that demand exclusive publishing rights for their work, and then charge readers huge fees to read it?
Well actually, we know the answer to that too: academics want the prestige of publishing in big-name journals that have established reputations, and as a result, those well-known journals are in a position to dictate the terms of the contract. A professor might genuinely want to publish their paper in a journal where it can be read for free by all, but they can hardly be blamed for thinking of their own career path first.
Here's the question I really wanted answered: If "prestige" only exists in the minds of other academics within a field, then why don't the academics within a given field just agree to confer "prestige" on papers published in open-access journals, if they can see for themselves that the quality is equivalent to what would be published in the old-guard journals that charge an arm and a leg? And then make hiring, promotion, and tenure decisions accordingly?
I don't mean that the papers published in an open-access journal would bypass the peer-review process, and that everyone in the field would have to judge the papers for themselves without any prior certification of their quality. One of the points that Peter Suber makes repeatedly in his book Open Access is that open access is not about skipping peer review and dumping papers directly onto the web. Rather, the process would work similarly to peer review for a traditional journal:
-
Author submits a paper to journal XYZ.
-
Journal XYZ selects one or more peer reviewers from among their list of people they consider qualified to review the paper. The peer reviewers send back their usual suggestions and some consensus is reached as to whether or not to publish.
-
If Journal XYZ publishes the paper, then they have certified that the paper passed the quality controls in step #2, and the author can now legitimately claim that they had a paper published in Journal XYZ.
-
If people in the field know that Journal XYZ is not skimping on the quality controls in step #2 — that Journal XYZ is sending the papers to the same academics who would do peer review for one of the old-guard journals, and who are holding the papers to the same standard — then they should respect the paper just as much as if it were published in a traditional journal. If a person has never heard of Journal XYZ, then it should only take a minute to explain to them how it works (and crucially, that Journal XYZ is just as strict about quality as the old-guard journals that everybody has heard of).
Each step in this process should cost the journal virtually nothing. The "hard cost," the part that consumes the time of people with unique skills, is the peer review step, but peer reviewers are usually paid by universities and consider peer review for academic journals to be part of their job description. At a minimum, all the editors really have to do is maintain the list of people they consider qualified to do the peer review, and send the submitted papers off to them.
Moreover, the entire process should be fast. Again, the "hard cost" in time is the peer review, but there's no reason that the delays between submission and publication should be in the range of months or years.
(I'm assuming that the article authors would want their writings to be widely read, or at least would not be opposed to it. That may not be the case if, for example, the authors were commissioned by a pharmaceutical company for a study that cast their drug in a favorable light, but the authors realize that their research methods contained errors and want to minimize the number of eyes on their paper, to reduce the chances of their chicanery being caught. Ben Goldacre's Bad Pharma documents these types of problems very thoroughly, but I'm sidestepping that issue for now.)
So, with that in mind as the ideal, I asked my friends, including many current and former academics, why this essentially wasn't the model that was used. Several mentioned the Public Library of Science, which publishes all articles in its journals under a Creative Commons Attribution License (free for anyone to read and reproduce in full, as long as the original author is cited), and finances its operations through publication fees. These fees are in the $2,000-$3,000 range, heavily discounted for low-income countries and authors, and in any case most academic authors pay the fees out of their research grants and not out of their own pockets. That sounded much better than the traditional model, I thought, but I still didn't understand why the costs weren't even closer to zero. Another friend pointed out that PLOS costs cover the expenses for many of their other activities — which are all noble goals, to be sure, but at the same time, why isn't anybody operating a more bare-bones model which minimizes all expenses, and charges almost nothing for publication or subscription?
This, it turns out, appears to be the approach of the PeerJ project, which aims to let authors pay a one-time fee of $99 at article submission time for the right to publish one article per year — or, if you prefer to pay only if your article is accepted for publication, you can pay $129 "on acceptance" (explained here). And the author of the Techdirt piece mentions that he submitted a paper which was published in the inaugural edition of one of PeerJ's journals, 10 weeks after the submission date. This is cheap and fast enough that I'd call it a validation of the theoretical model which predicts the whole process should be able to be done for almost no cost in almost no time. In other words, I think PeerJ will succeed, but even if it does fail, it will only be because of some anomalous business snafu, not because the hard costs of the service they're providing are greater than the dirt-cheap price they're charging for it. If for any reason PeerJ doesn't happen to get it right the first time, they or some other company should keep trying until someone makes it work.
The basic algorithm at work here — taking a piece of content, submitting it to one or more suitably qualified reviewers, and then certifying the content based on the feedback of the reviewers — is something I've advocated in many contexts over the years, for many different types of problems. In one article I argued that we could make success in the music industry into much more of a meritocracy, with far less arbitrariness in determining who succeeds and fails, if a suitably popular site like Pandora simply took new submissions from artists, had the content "rated" by a random sample of listeners interested in that type of music, and if enough of them liked it, push the content out to all of the fans of that genre. In "Crowdsourcing the Censors" I suggested that Facebook's complaint review process should use the same principle: If a given page received enough complaints, have the page contents reviewed by a random subset of Facebook users who had signed up to be "abusive content" reviewers, and then only flag the page for removal if a high enough percentage of those users voted that the page had indeed violated Facebook's guidelines. This year I argued that "We The People", the White House's online petition-drive-organizing website, should rate ideas based on what a random subset of users think of each idea, rather than allowing users to organize mobs of their friends and followers to vote their own ideas to the top of the pile (which, in case you missed it, is how 4chan gave us this). Or, if you think the general public is not qualified to rate ideas according to how they should be prioritized by the White House (and I'd be inclined to agree), you could have the ideas rated by a random subset of, say, the nation's economics professors.
Of course, I haven't heard of any plans to implement this algorithm in any of those contexts. Not that I expected the key power players to be reading my articles, but it's a little surprising that none of them ever came up with this idea independently, either. (To this day, the only website I'm aware of that ever implemented random-sample voting correctly, was HotOrNot.com, where users could rate members' pictures by attractiveness — but each picture's rating was determined by showing it to a random subset of the site's visitors. That system is gone, since the site has made itself over into a date-finding service.)
But academia in general, and science specifically, is different from other arenas in a number of key ways which could help this algorithm succeed:
-
Academia, uniquely, is comprised of many professionals whose love of knowledge and intellectual inquiry, is greater than their desire for money. That's not to say that I don't think the same algorithm could work just as well in a business like the music industry, where most of the stakeholders are in it for the money. But even if Pandora did successfully implement the algorithm, it would meet a lot of resistance from entrenched interests in the music industry, who make their money by finding and promoting and managing talent and would not be happy about a new system that threatened to make them irrelevant. In academia, by contrast, it's quite plausible that even the "entrenched interests" — the people who had become superstars under the old system — would see the new system's great potential for disseminating free knowledge, and would welcome it even if it gave scrappy new upstart academics a chance to dethrone them. Not everybody in academia loves knowledge more than they love their own prestige, but I know more people like that in academia than anywhere else.
-
In academia, even among people who do care primarily about their own prestige, many of them have tenure and guaranteed job security, a situation that does not exist in most other industries. This gives them the freedom to experiment with new models, such as submitting papers to upstart PeerJ journals. But more importantly for our purposes, it means they can announce that in their department's hiring and promotion decisions, they will count PeerJ-published papers as legitimate professional accomplishments, for the benefit of non-tenured faculty members who do have to worry about their resume.
- Academics, particularly in maths and sciences, are more prone to the kind of thinking that would lead a person naturally in the direction of the kind of system that PeerJ embodies. First, think of a theoretical model (like the kind I described near the beginning of the article). This model predicts that, ideally, it should be possible to publish papers at very low cost with quick turnaround times, without sacrificing peer-review quality assurance. Now, try to approximate that model as closely as possible in the real world. (In most other industries that I've worked in, there's much more inertia around the existing way of doing things, and far less willingness to entertain any discussion about whether a theoretical model can show how we could accomplish the same thing with vastly less overhead.)
And that, in the end, is the real reason journal articles should be free. Not because the U.S. government is making it a condition for taxpayer-funded research, although that is a welcome development. But because there's no part of the process that should cost very much to begin with, if article authors and peer reviewers are already being paid by their employers. The last piece of the puzzle is that enough academics and faculty departments have to agree to confer "prestige" on articles published in open-access journals, equivalent to the level of prestige that they would accord for an article published in a traditional journal of the same quality. If they won't do that, then the old-guard journals will maintain their monopoly on conferring "prestige", and don't be surprised if journal prices keep growing to the point where even Harvard can't pay for them.
-
-
The Real Reason Journal Articles Should Be Free
Bennett Haselton writes "The U.S. government recently announced that academic papers on federally-funded research should become freely available online within one year of publication in a journal. But the real question is why academics don't simply publish most papers freely anyway. If the problem is that traditional journals have a monopoly on the kind of prestige that can only be conferred by having your paper appear in their hallowed pages, that monopoly can easily be broken, because there's no reason why open-access journals can't confer the same imprimatur of quality." Read on for the rest of Bennett's thoughts on the great free-access debate.Around the time of the tragic suicide of Aaron Swartz, who lobbied tirelessly for free access to academic articles (in his sometimes grey-hat manner, which ultimately got him in trouble), I admitted to some friends that I didn't understand how this became a problem. Why aren't all journal articles free, all the time?
I don't mean that I didn't know why the journal publishers charged exorbitant fees for their subscriptions. If academic researchers have to have access to journal articles in order to do their jobs, then you can expect the journals to gouge academic libraries on the prices. What I didn't understand was: Why do academics even publish in journals that demand exclusive publishing rights for their work, and then charge readers huge fees to read it?
Well actually, we know the answer to that too: academics want the prestige of publishing in big-name journals that have established reputations, and as a result, those well-known journals are in a position to dictate the terms of the contract. A professor might genuinely want to publish their paper in a journal where it can be read for free by all, but they can hardly be blamed for thinking of their own career path first.
Here's the question I really wanted answered: If "prestige" only exists in the minds of other academics within a field, then why don't the academics within a given field just agree to confer "prestige" on papers published in open-access journals, if they can see for themselves that the quality is equivalent to what would be published in the old-guard journals that charge an arm and a leg? And then make hiring, promotion, and tenure decisions accordingly?
I don't mean that the papers published in an open-access journal would bypass the peer-review process, and that everyone in the field would have to judge the papers for themselves without any prior certification of their quality. One of the points that Peter Suber makes repeatedly in his book Open Access is that open access is not about skipping peer review and dumping papers directly onto the web. Rather, the process would work similarly to peer review for a traditional journal:
-
Author submits a paper to journal XYZ.
-
Journal XYZ selects one or more peer reviewers from among their list of people they consider qualified to review the paper. The peer reviewers send back their usual suggestions and some consensus is reached as to whether or not to publish.
-
If Journal XYZ publishes the paper, then they have certified that the paper passed the quality controls in step #2, and the author can now legitimately claim that they had a paper published in Journal XYZ.
-
If people in the field know that Journal XYZ is not skimping on the quality controls in step #2 — that Journal XYZ is sending the papers to the same academics who would do peer review for one of the old-guard journals, and who are holding the papers to the same standard — then they should respect the paper just as much as if it were published in a traditional journal. If a person has never heard of Journal XYZ, then it should only take a minute to explain to them how it works (and crucially, that Journal XYZ is just as strict about quality as the old-guard journals that everybody has heard of).
Each step in this process should cost the journal virtually nothing. The "hard cost," the part that consumes the time of people with unique skills, is the peer review step, but peer reviewers are usually paid by universities and consider peer review for academic journals to be part of their job description. At a minimum, all the editors really have to do is maintain the list of people they consider qualified to do the peer review, and send the submitted papers off to them.
Moreover, the entire process should be fast. Again, the "hard cost" in time is the peer review, but there's no reason that the delays between submission and publication should be in the range of months or years.
(I'm assuming that the article authors would want their writings to be widely read, or at least would not be opposed to it. That may not be the case if, for example, the authors were commissioned by a pharmaceutical company for a study that cast their drug in a favorable light, but the authors realize that their research methods contained errors and want to minimize the number of eyes on their paper, to reduce the chances of their chicanery being caught. Ben Goldacre's Bad Pharma documents these types of problems very thoroughly, but I'm sidestepping that issue for now.)
So, with that in mind as the ideal, I asked my friends, including many current and former academics, why this essentially wasn't the model that was used. Several mentioned the Public Library of Science, which publishes all articles in its journals under a Creative Commons Attribution License (free for anyone to read and reproduce in full, as long as the original author is cited), and finances its operations through publication fees. These fees are in the $2,000-$3,000 range, heavily discounted for low-income countries and authors, and in any case most academic authors pay the fees out of their research grants and not out of their own pockets. That sounded much better than the traditional model, I thought, but I still didn't understand why the costs weren't even closer to zero. Another friend pointed out that PLOS costs cover the expenses for many of their other activities — which are all noble goals, to be sure, but at the same time, why isn't anybody operating a more bare-bones model which minimizes all expenses, and charges almost nothing for publication or subscription?
This, it turns out, appears to be the approach of the PeerJ project, which aims to let authors pay a one-time fee of $99 at article submission time for the right to publish one article per year — or, if you prefer to pay only if your article is accepted for publication, you can pay $129 "on acceptance" (explained here). And the author of the Techdirt piece mentions that he submitted a paper which was published in the inaugural edition of one of PeerJ's journals, 10 weeks after the submission date. This is cheap and fast enough that I'd call it a validation of the theoretical model which predicts the whole process should be able to be done for almost no cost in almost no time. In other words, I think PeerJ will succeed, but even if it does fail, it will only be because of some anomalous business snafu, not because the hard costs of the service they're providing are greater than the dirt-cheap price they're charging for it. If for any reason PeerJ doesn't happen to get it right the first time, they or some other company should keep trying until someone makes it work.
The basic algorithm at work here — taking a piece of content, submitting it to one or more suitably qualified reviewers, and then certifying the content based on the feedback of the reviewers — is something I've advocated in many contexts over the years, for many different types of problems. In one article I argued that we could make success in the music industry into much more of a meritocracy, with far less arbitrariness in determining who succeeds and fails, if a suitably popular site like Pandora simply took new submissions from artists, had the content "rated" by a random sample of listeners interested in that type of music, and if enough of them liked it, push the content out to all of the fans of that genre. In "Crowdsourcing the Censors" I suggested that Facebook's complaint review process should use the same principle: If a given page received enough complaints, have the page contents reviewed by a random subset of Facebook users who had signed up to be "abusive content" reviewers, and then only flag the page for removal if a high enough percentage of those users voted that the page had indeed violated Facebook's guidelines. This year I argued that "We The People", the White House's online petition-drive-organizing website, should rate ideas based on what a random subset of users think of each idea, rather than allowing users to organize mobs of their friends and followers to vote their own ideas to the top of the pile (which, in case you missed it, is how 4chan gave us this). Or, if you think the general public is not qualified to rate ideas according to how they should be prioritized by the White House (and I'd be inclined to agree), you could have the ideas rated by a random subset of, say, the nation's economics professors.
Of course, I haven't heard of any plans to implement this algorithm in any of those contexts. Not that I expected the key power players to be reading my articles, but it's a little surprising that none of them ever came up with this idea independently, either. (To this day, the only website I'm aware of that ever implemented random-sample voting correctly, was HotOrNot.com, where users could rate members' pictures by attractiveness — but each picture's rating was determined by showing it to a random subset of the site's visitors. That system is gone, since the site has made itself over into a date-finding service.)
But academia in general, and science specifically, is different from other arenas in a number of key ways which could help this algorithm succeed:
-
Academia, uniquely, is comprised of many professionals whose love of knowledge and intellectual inquiry, is greater than their desire for money. That's not to say that I don't think the same algorithm could work just as well in a business like the music industry, where most of the stakeholders are in it for the money. But even if Pandora did successfully implement the algorithm, it would meet a lot of resistance from entrenched interests in the music industry, who make their money by finding and promoting and managing talent and would not be happy about a new system that threatened to make them irrelevant. In academia, by contrast, it's quite plausible that even the "entrenched interests" — the people who had become superstars under the old system — would see the new system's great potential for disseminating free knowledge, and would welcome it even if it gave scrappy new upstart academics a chance to dethrone them. Not everybody in academia loves knowledge more than they love their own prestige, but I know more people like that in academia than anywhere else.
-
In academia, even among people who do care primarily about their own prestige, many of them have tenure and guaranteed job security, a situation that does not exist in most other industries. This gives them the freedom to experiment with new models, such as submitting papers to upstart PeerJ journals. But more importantly for our purposes, it means they can announce that in their department's hiring and promotion decisions, they will count PeerJ-published papers as legitimate professional accomplishments, for the benefit of non-tenured faculty members who do have to worry about their resume.
- Academics, particularly in maths and sciences, are more prone to the kind of thinking that would lead a person naturally in the direction of the kind of system that PeerJ embodies. First, think of a theoretical model (like the kind I described near the beginning of the article). This model predicts that, ideally, it should be possible to publish papers at very low cost with quick turnaround times, without sacrificing peer-review quality assurance. Now, try to approximate that model as closely as possible in the real world. (In most other industries that I've worked in, there's much more inertia around the existing way of doing things, and far less willingness to entertain any discussion about whether a theoretical model can show how we could accomplish the same thing with vastly less overhead.)
And that, in the end, is the real reason journal articles should be free. Not because the U.S. government is making it a condition for taxpayer-funded research, although that is a welcome development. But because there's no part of the process that should cost very much to begin with, if article authors and peer reviewers are already being paid by their employers. The last piece of the puzzle is that enough academics and faculty departments have to agree to confer "prestige" on articles published in open-access journals, equivalent to the level of prestige that they would accord for an article published in a traditional journal of the same quality. If they won't do that, then the old-guard journals will maintain their monopoly on conferring "prestige", and don't be surprised if journal prices keep growing to the point where even Harvard can't pay for them.
-
-
The Real Reason Journal Articles Should Be Free
Bennett Haselton writes "The U.S. government recently announced that academic papers on federally-funded research should become freely available online within one year of publication in a journal. But the real question is why academics don't simply publish most papers freely anyway. If the problem is that traditional journals have a monopoly on the kind of prestige that can only be conferred by having your paper appear in their hallowed pages, that monopoly can easily be broken, because there's no reason why open-access journals can't confer the same imprimatur of quality." Read on for the rest of Bennett's thoughts on the great free-access debate.Around the time of the tragic suicide of Aaron Swartz, who lobbied tirelessly for free access to academic articles (in his sometimes grey-hat manner, which ultimately got him in trouble), I admitted to some friends that I didn't understand how this became a problem. Why aren't all journal articles free, all the time?
I don't mean that I didn't know why the journal publishers charged exorbitant fees for their subscriptions. If academic researchers have to have access to journal articles in order to do their jobs, then you can expect the journals to gouge academic libraries on the prices. What I didn't understand was: Why do academics even publish in journals that demand exclusive publishing rights for their work, and then charge readers huge fees to read it?
Well actually, we know the answer to that too: academics want the prestige of publishing in big-name journals that have established reputations, and as a result, those well-known journals are in a position to dictate the terms of the contract. A professor might genuinely want to publish their paper in a journal where it can be read for free by all, but they can hardly be blamed for thinking of their own career path first.
Here's the question I really wanted answered: If "prestige" only exists in the minds of other academics within a field, then why don't the academics within a given field just agree to confer "prestige" on papers published in open-access journals, if they can see for themselves that the quality is equivalent to what would be published in the old-guard journals that charge an arm and a leg? And then make hiring, promotion, and tenure decisions accordingly?
I don't mean that the papers published in an open-access journal would bypass the peer-review process, and that everyone in the field would have to judge the papers for themselves without any prior certification of their quality. One of the points that Peter Suber makes repeatedly in his book Open Access is that open access is not about skipping peer review and dumping papers directly onto the web. Rather, the process would work similarly to peer review for a traditional journal:
-
Author submits a paper to journal XYZ.
-
Journal XYZ selects one or more peer reviewers from among their list of people they consider qualified to review the paper. The peer reviewers send back their usual suggestions and some consensus is reached as to whether or not to publish.
-
If Journal XYZ publishes the paper, then they have certified that the paper passed the quality controls in step #2, and the author can now legitimately claim that they had a paper published in Journal XYZ.
-
If people in the field know that Journal XYZ is not skimping on the quality controls in step #2 — that Journal XYZ is sending the papers to the same academics who would do peer review for one of the old-guard journals, and who are holding the papers to the same standard — then they should respect the paper just as much as if it were published in a traditional journal. If a person has never heard of Journal XYZ, then it should only take a minute to explain to them how it works (and crucially, that Journal XYZ is just as strict about quality as the old-guard journals that everybody has heard of).
Each step in this process should cost the journal virtually nothing. The "hard cost," the part that consumes the time of people with unique skills, is the peer review step, but peer reviewers are usually paid by universities and consider peer review for academic journals to be part of their job description. At a minimum, all the editors really have to do is maintain the list of people they consider qualified to do the peer review, and send the submitted papers off to them.
Moreover, the entire process should be fast. Again, the "hard cost" in time is the peer review, but there's no reason that the delays between submission and publication should be in the range of months or years.
(I'm assuming that the article authors would want their writings to be widely read, or at least would not be opposed to it. That may not be the case if, for example, the authors were commissioned by a pharmaceutical company for a study that cast their drug in a favorable light, but the authors realize that their research methods contained errors and want to minimize the number of eyes on their paper, to reduce the chances of their chicanery being caught. Ben Goldacre's Bad Pharma documents these types of problems very thoroughly, but I'm sidestepping that issue for now.)
So, with that in mind as the ideal, I asked my friends, including many current and former academics, why this essentially wasn't the model that was used. Several mentioned the Public Library of Science, which publishes all articles in its journals under a Creative Commons Attribution License (free for anyone to read and reproduce in full, as long as the original author is cited), and finances its operations through publication fees. These fees are in the $2,000-$3,000 range, heavily discounted for low-income countries and authors, and in any case most academic authors pay the fees out of their research grants and not out of their own pockets. That sounded much better than the traditional model, I thought, but I still didn't understand why the costs weren't even closer to zero. Another friend pointed out that PLOS costs cover the expenses for many of their other activities — which are all noble goals, to be sure, but at the same time, why isn't anybody operating a more bare-bones model which minimizes all expenses, and charges almost nothing for publication or subscription?
This, it turns out, appears to be the approach of the PeerJ project, which aims to let authors pay a one-time fee of $99 at article submission time for the right to publish one article per year — or, if you prefer to pay only if your article is accepted for publication, you can pay $129 "on acceptance" (explained here). And the author of the Techdirt piece mentions that he submitted a paper which was published in the inaugural edition of one of PeerJ's journals, 10 weeks after the submission date. This is cheap and fast enough that I'd call it a validation of the theoretical model which predicts the whole process should be able to be done for almost no cost in almost no time. In other words, I think PeerJ will succeed, but even if it does fail, it will only be because of some anomalous business snafu, not because the hard costs of the service they're providing are greater than the dirt-cheap price they're charging for it. If for any reason PeerJ doesn't happen to get it right the first time, they or some other company should keep trying until someone makes it work.
The basic algorithm at work here — taking a piece of content, submitting it to one or more suitably qualified reviewers, and then certifying the content based on the feedback of the reviewers — is something I've advocated in many contexts over the years, for many different types of problems. In one article I argued that we could make success in the music industry into much more of a meritocracy, with far less arbitrariness in determining who succeeds and fails, if a suitably popular site like Pandora simply took new submissions from artists, had the content "rated" by a random sample of listeners interested in that type of music, and if enough of them liked it, push the content out to all of the fans of that genre. In "Crowdsourcing the Censors" I suggested that Facebook's complaint review process should use the same principle: If a given page received enough complaints, have the page contents reviewed by a random subset of Facebook users who had signed up to be "abusive content" reviewers, and then only flag the page for removal if a high enough percentage of those users voted that the page had indeed violated Facebook's guidelines. This year I argued that "We The People", the White House's online petition-drive-organizing website, should rate ideas based on what a random subset of users think of each idea, rather than allowing users to organize mobs of their friends and followers to vote their own ideas to the top of the pile (which, in case you missed it, is how 4chan gave us this). Or, if you think the general public is not qualified to rate ideas according to how they should be prioritized by the White House (and I'd be inclined to agree), you could have the ideas rated by a random subset of, say, the nation's economics professors.
Of course, I haven't heard of any plans to implement this algorithm in any of those contexts. Not that I expected the key power players to be reading my articles, but it's a little surprising that none of them ever came up with this idea independently, either. (To this day, the only website I'm aware of that ever implemented random-sample voting correctly, was HotOrNot.com, where users could rate members' pictures by attractiveness — but each picture's rating was determined by showing it to a random subset of the site's visitors. That system is gone, since the site has made itself over into a date-finding service.)
But academia in general, and science specifically, is different from other arenas in a number of key ways which could help this algorithm succeed:
-
Academia, uniquely, is comprised of many professionals whose love of knowledge and intellectual inquiry, is greater than their desire for money. That's not to say that I don't think the same algorithm could work just as well in a business like the music industry, where most of the stakeholders are in it for the money. But even if Pandora did successfully implement the algorithm, it would meet a lot of resistance from entrenched interests in the music industry, who make their money by finding and promoting and managing talent and would not be happy about a new system that threatened to make them irrelevant. In academia, by contrast, it's quite plausible that even the "entrenched interests" — the people who had become superstars under the old system — would see the new system's great potential for disseminating free knowledge, and would welcome it even if it gave scrappy new upstart academics a chance to dethrone them. Not everybody in academia loves knowledge more than they love their own prestige, but I know more people like that in academia than anywhere else.
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In academia, even among people who do care primarily about their own prestige, many of them have tenure and guaranteed job security, a situation that does not exist in most other industries. This gives them the freedom to experiment with new models, such as submitting papers to upstart PeerJ journals. But more importantly for our purposes, it means they can announce that in their department's hiring and promotion decisions, they will count PeerJ-published papers as legitimate professional accomplishments, for the benefit of non-tenured faculty members who do have to worry about their resume.
- Academics, particularly in maths and sciences, are more prone to the kind of thinking that would lead a person naturally in the direction of the kind of system that PeerJ embodies. First, think of a theoretical model (like the kind I described near the beginning of the article). This model predicts that, ideally, it should be possible to publish papers at very low cost with quick turnaround times, without sacrificing peer-review quality assurance. Now, try to approximate that model as closely as possible in the real world. (In most other industries that I've worked in, there's much more inertia around the existing way of doing things, and far less willingness to entertain any discussion about whether a theoretical model can show how we could accomplish the same thing with vastly less overhead.)
And that, in the end, is the real reason journal articles should be free. Not because the U.S. government is making it a condition for taxpayer-funded research, although that is a welcome development. But because there's no part of the process that should cost very much to begin with, if article authors and peer reviewers are already being paid by their employers. The last piece of the puzzle is that enough academics and faculty departments have to agree to confer "prestige" on articles published in open-access journals, equivalent to the level of prestige that they would accord for an article published in a traditional journal of the same quality. If they won't do that, then the old-guard journals will maintain their monopoly on conferring "prestige", and don't be surprised if journal prices keep growing to the point where even Harvard can't pay for them.
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The Real Reason Journal Articles Should Be Free
Bennett Haselton writes "The U.S. government recently announced that academic papers on federally-funded research should become freely available online within one year of publication in a journal. But the real question is why academics don't simply publish most papers freely anyway. If the problem is that traditional journals have a monopoly on the kind of prestige that can only be conferred by having your paper appear in their hallowed pages, that monopoly can easily be broken, because there's no reason why open-access journals can't confer the same imprimatur of quality." Read on for the rest of Bennett's thoughts on the great free-access debate.Around the time of the tragic suicide of Aaron Swartz, who lobbied tirelessly for free access to academic articles (in his sometimes grey-hat manner, which ultimately got him in trouble), I admitted to some friends that I didn't understand how this became a problem. Why aren't all journal articles free, all the time?
I don't mean that I didn't know why the journal publishers charged exorbitant fees for their subscriptions. If academic researchers have to have access to journal articles in order to do their jobs, then you can expect the journals to gouge academic libraries on the prices. What I didn't understand was: Why do academics even publish in journals that demand exclusive publishing rights for their work, and then charge readers huge fees to read it?
Well actually, we know the answer to that too: academics want the prestige of publishing in big-name journals that have established reputations, and as a result, those well-known journals are in a position to dictate the terms of the contract. A professor might genuinely want to publish their paper in a journal where it can be read for free by all, but they can hardly be blamed for thinking of their own career path first.
Here's the question I really wanted answered: If "prestige" only exists in the minds of other academics within a field, then why don't the academics within a given field just agree to confer "prestige" on papers published in open-access journals, if they can see for themselves that the quality is equivalent to what would be published in the old-guard journals that charge an arm and a leg? And then make hiring, promotion, and tenure decisions accordingly?
I don't mean that the papers published in an open-access journal would bypass the peer-review process, and that everyone in the field would have to judge the papers for themselves without any prior certification of their quality. One of the points that Peter Suber makes repeatedly in his book Open Access is that open access is not about skipping peer review and dumping papers directly onto the web. Rather, the process would work similarly to peer review for a traditional journal:
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Author submits a paper to journal XYZ.
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Journal XYZ selects one or more peer reviewers from among their list of people they consider qualified to review the paper. The peer reviewers send back their usual suggestions and some consensus is reached as to whether or not to publish.
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If Journal XYZ publishes the paper, then they have certified that the paper passed the quality controls in step #2, and the author can now legitimately claim that they had a paper published in Journal XYZ.
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If people in the field know that Journal XYZ is not skimping on the quality controls in step #2 — that Journal XYZ is sending the papers to the same academics who would do peer review for one of the old-guard journals, and who are holding the papers to the same standard — then they should respect the paper just as much as if it were published in a traditional journal. If a person has never heard of Journal XYZ, then it should only take a minute to explain to them how it works (and crucially, that Journal XYZ is just as strict about quality as the old-guard journals that everybody has heard of).
Each step in this process should cost the journal virtually nothing. The "hard cost," the part that consumes the time of people with unique skills, is the peer review step, but peer reviewers are usually paid by universities and consider peer review for academic journals to be part of their job description. At a minimum, all the editors really have to do is maintain the list of people they consider qualified to do the peer review, and send the submitted papers off to them.
Moreover, the entire process should be fast. Again, the "hard cost" in time is the peer review, but there's no reason that the delays between submission and publication should be in the range of months or years.
(I'm assuming that the article authors would want their writings to be widely read, or at least would not be opposed to it. That may not be the case if, for example, the authors were commissioned by a pharmaceutical company for a study that cast their drug in a favorable light, but the authors realize that their research methods contained errors and want to minimize the number of eyes on their paper, to reduce the chances of their chicanery being caught. Ben Goldacre's Bad Pharma documents these types of problems very thoroughly, but I'm sidestepping that issue for now.)
So, with that in mind as the ideal, I asked my friends, including many current and former academics, why this essentially wasn't the model that was used. Several mentioned the Public Library of Science, which publishes all articles in its journals under a Creative Commons Attribution License (free for anyone to read and reproduce in full, as long as the original author is cited), and finances its operations through publication fees. These fees are in the $2,000-$3,000 range, heavily discounted for low-income countries and authors, and in any case most academic authors pay the fees out of their research grants and not out of their own pockets. That sounded much better than the traditional model, I thought, but I still didn't understand why the costs weren't even closer to zero. Another friend pointed out that PLOS costs cover the expenses for many of their other activities — which are all noble goals, to be sure, but at the same time, why isn't anybody operating a more bare-bones model which minimizes all expenses, and charges almost nothing for publication or subscription?
This, it turns out, appears to be the approach of the PeerJ project, which aims to let authors pay a one-time fee of $99 at article submission time for the right to publish one article per year — or, if you prefer to pay only if your article is accepted for publication, you can pay $129 "on acceptance" (explained here). And the author of the Techdirt piece mentions that he submitted a paper which was published in the inaugural edition of one of PeerJ's journals, 10 weeks after the submission date. This is cheap and fast enough that I'd call it a validation of the theoretical model which predicts the whole process should be able to be done for almost no cost in almost no time. In other words, I think PeerJ will succeed, but even if it does fail, it will only be because of some anomalous business snafu, not because the hard costs of the service they're providing are greater than the dirt-cheap price they're charging for it. If for any reason PeerJ doesn't happen to get it right the first time, they or some other company should keep trying until someone makes it work.
The basic algorithm at work here — taking a piece of content, submitting it to one or more suitably qualified reviewers, and then certifying the content based on the feedback of the reviewers — is something I've advocated in many contexts over the years, for many different types of problems. In one article I argued that we could make success in the music industry into much more of a meritocracy, with far less arbitrariness in determining who succeeds and fails, if a suitably popular site like Pandora simply took new submissions from artists, had the content "rated" by a random sample of listeners interested in that type of music, and if enough of them liked it, push the content out to all of the fans of that genre. In "Crowdsourcing the Censors" I suggested that Facebook's complaint review process should use the same principle: If a given page received enough complaints, have the page contents reviewed by a random subset of Facebook users who had signed up to be "abusive content" reviewers, and then only flag the page for removal if a high enough percentage of those users voted that the page had indeed violated Facebook's guidelines. This year I argued that "We The People", the White House's online petition-drive-organizing website, should rate ideas based on what a random subset of users think of each idea, rather than allowing users to organize mobs of their friends and followers to vote their own ideas to the top of the pile (which, in case you missed it, is how 4chan gave us this). Or, if you think the general public is not qualified to rate ideas according to how they should be prioritized by the White House (and I'd be inclined to agree), you could have the ideas rated by a random subset of, say, the nation's economics professors.
Of course, I haven't heard of any plans to implement this algorithm in any of those contexts. Not that I expected the key power players to be reading my articles, but it's a little surprising that none of them ever came up with this idea independently, either. (To this day, the only website I'm aware of that ever implemented random-sample voting correctly, was HotOrNot.com, where users could rate members' pictures by attractiveness — but each picture's rating was determined by showing it to a random subset of the site's visitors. That system is gone, since the site has made itself over into a date-finding service.)
But academia in general, and science specifically, is different from other arenas in a number of key ways which could help this algorithm succeed:
-
Academia, uniquely, is comprised of many professionals whose love of knowledge and intellectual inquiry, is greater than their desire for money. That's not to say that I don't think the same algorithm could work just as well in a business like the music industry, where most of the stakeholders are in it for the money. But even if Pandora did successfully implement the algorithm, it would meet a lot of resistance from entrenched interests in the music industry, who make their money by finding and promoting and managing talent and would not be happy about a new system that threatened to make them irrelevant. In academia, by contrast, it's quite plausible that even the "entrenched interests" — the people who had become superstars under the old system — would see the new system's great potential for disseminating free knowledge, and would welcome it even if it gave scrappy new upstart academics a chance to dethrone them. Not everybody in academia loves knowledge more than they love their own prestige, but I know more people like that in academia than anywhere else.
-
In academia, even among people who do care primarily about their own prestige, many of them have tenure and guaranteed job security, a situation that does not exist in most other industries. This gives them the freedom to experiment with new models, such as submitting papers to upstart PeerJ journals. But more importantly for our purposes, it means they can announce that in their department's hiring and promotion decisions, they will count PeerJ-published papers as legitimate professional accomplishments, for the benefit of non-tenured faculty members who do have to worry about their resume.
- Academics, particularly in maths and sciences, are more prone to the kind of thinking that would lead a person naturally in the direction of the kind of system that PeerJ embodies. First, think of a theoretical model (like the kind I described near the beginning of the article). This model predicts that, ideally, it should be possible to publish papers at very low cost with quick turnaround times, without sacrificing peer-review quality assurance. Now, try to approximate that model as closely as possible in the real world. (In most other industries that I've worked in, there's much more inertia around the existing way of doing things, and far less willingness to entertain any discussion about whether a theoretical model can show how we could accomplish the same thing with vastly less overhead.)
And that, in the end, is the real reason journal articles should be free. Not because the U.S. government is making it a condition for taxpayer-funded research, although that is a welcome development. But because there's no part of the process that should cost very much to begin with, if article authors and peer reviewers are already being paid by their employers. The last piece of the puzzle is that enough academics and faculty departments have to agree to confer "prestige" on articles published in open-access journals, equivalent to the level of prestige that they would accord for an article published in a traditional journal of the same quality. If they won't do that, then the old-guard journals will maintain their monopoly on conferring "prestige", and don't be surprised if journal prices keep growing to the point where even Harvard can't pay for them.
-
-
The Rise of Chemophobia In the News
eldavojohn writes "American news outlets like The New York Times seem to thrive on chemophobia — consumer fear of the ambiguous concept of 'chemicals.' As a result, Pulitzer-prize winning science writer Deborah Blum has decided to call out New York Times journalist Nicholas Kirstof for his secondary crusade (she notes he is an admirable journalist in other realms) against chemicals. She's quick to point out the absurdity of fearing chemicals like Hydrogen which could be a puzzler considering its integral role played in life-giving water as well as life-destroying hydrogen cyanide. Another example is O2 versus O3. Blum calls upon journalists to be more specific, to avoid the use of vague terms like 'toxin' let alone 'chemical' and instead inform the public with lengthy chemical names like perfluorooctanoic acid (PFOA) instead of omitting the actual culprit altogether. Kristof has, of course, resorted to calling makers of these specific compounds 'Big Chem' and Blum chastises his poorly researched reporting along with chemophobic lingo. Chemists of Slashdot, have you found reporting on 'chemicals' to be as poor as Blum alleges or is this no more erroneous than any scare tactic used to move newspapers and garner eyeballs?" -
The Sketchbook of Susan Kare
theodp writes "The Mac wasn't the first computer to present the user with a virtual desktop of files and folders instead of a command line and a blinking cursor, but it was the sketchbook of Susan Kare that gave computing a human face to the masses. After graduating from NYU with a Ph.D. in fine arts, Kare was working on a commission from an Arkansas museum to sculpt a razorback hog out of steel when she got a call from high-school friend Andy Hertzfeld offering her a job to work on the Mac. The rest, as they say, is UI history. Armed with a $2.50 sketchbook, Kare crafted the casual prototypes of a new, radically user-friendly face of computing. BTW, just in time for holiday gift-giving, Kare has self-published her first book, Susan Kare Icons. So, could computing could use a few more artists, and a few less MBAs?" -
The Chemical-Free Chemistry Kit
eldavojohn writes "It's known that home chemistry sets are in danger of going extinct, which has spurred set makers to add the label 'Chemical Free!' on modern chemistry sets (NSFW warning — JAYFK stands for Journal of Are You *expletive* Kidding). The kit for ages 10+ provides 60 chemistry activities that are mind-bogglingly chemical free. The pedantic blog entry points out the many questions that arise when the set promises 'fun activities' like growing plants and crystals — sans chemicals! That would be quite the feat to accomplish without the evilest of chemicals: dihydrogen monoxide. While this rebuttal is done in jest, this set's intentions do highlight the chilling growth of a new mentality: Chemicals are bad. Despite their omnipresence from the beginning of time, they are no longer safe. Even real researchers are starting to notice the possible voluntary stunting of science education that is occurring in the name of overreaching safety." -
Euler's Partition Function Theory Finished
universegeek writes "Mathematician Ken Ono, from Emory, has solved a 250-year-old problem: how to exactly and explicitly generate partition numbers. Ono and colleagues were able to finally do this by realizing that the pattern of partition numbers is fractal (PDF). This pattern allowed them to find a finite, algebraic formula, which is like striking oil in mathematics." -
Tevatron To Shut Down At End of 2011
universegeek writes "It appears Fermilab's Tevatron will be shutting down by the end of 2011. Rumors confirmed today at the ISP220 conference say that the DOE denied further funding for the project. Looks like the LHC is our only hope in the hunt for the Higgs after all." -
Tetris May Reduce PTSD, But Pub Quiz Makes It Worse
Last year we discussed news that researchers from Oxford University discovered playing Tetris after watching a disturbing film reduced the amount of intrusive flashbacks experienced by test subjects. The researchers then wondered if that was true for other games, so they began a new study, the results of which were just published in the journal PLoS ONE. Reader SpuriousLogic points out that while they repeated their earlier finding about Tetris, they also found that subjects who played trivia game Pub Quiz instead reported more flashbacks. "Research tells us that there is a period of up to six hours after the trauma in which it is possible to interfere with the way that these traumatic memories are formed in the mind. During this time-frame, certain tasks can compete with the same brain channels that are needed to form the memory. This is because there are limits to our abilities in each channel: for example, it is difficult to hold a conversation while doing math problems. The Oxford team reasoned that recognizing the shapes and moving the colored building blocks around in Tetris competes with the images of trauma in the perceptual information channel. Consequently, the images of trauma (the flashbacks) are reduced. The team believe that this is not a simple case of distracting the mind with a computer game, as answering general knowledge questions in the Pub Quiz game increased flashbacks. The researchers believe that this verbal based game competes with remembering the contextual meaning of the trauma, so the visual memories in the perceptual channel are reinforced and the flashbacks are increased." -
Study Shows Worm Grunters Imitate Moles
Science_afficionado writes "In the southeastern US, fisherman have an unusual way to collect earthworms for bait. The practice is called worm grunting, fiddling, snoring, or charming. It involves pounding a wooden stake into the ground and rubbing the top of the stake with a long piece of steel to produce a grunting sound that causes earthworms to come to the surface where they can be easily collected for bait. A study published today in the open access journal PLoS ONE shows that the technique works because the worm grunters are unknowingly imitating the sounds created by burrowing moles. Full text of the paper is available at PLoS ONE." -
What is the First Day in a University Lab Like?
the_kanzure writes "I'm going to start at a university lab a few days after my high school graduation ceremony. The lab is an eclectic blend of computer science, evolutionary engineering and molecular biology, essentially it's research/development and — best of all — the research is worth something to me and my other pet projects. What I do know of science, tech and research has been gleaned from the internet. The open access research repositories (arxiv, PLoS, etc.) have been a life-saver. But showing up to get real, hard experience is not the same as those late hours into the night spent debugging software. In person, you can't just call up a favorite bash script to open up a few hundred tabs to do some quick research on feasability and past research ... how is this supposed to work — does anybody really get stuff done this way? So I've been wondering how Slashdotters have handled transitioning from learning in front of a screen and a good net connection, to actually showing up and getting stuff done. What's a first day like in a lab? Stories? What's the etiquette? Informal? In programing circles, you can always submit a patch and alternatives, but does this hold here? Is the professor still generally considered the PHB and the lowly undergrads are his minions to carry out his bidding?" -
YouTube for Science?
Shipud writes "The National Science Foundation, Public Library of Science and the San Diego Supercomputing Center have partnered to set up what can best be described as a "YouTube for scientists", SciVee". Scientists can upload their research papers, accompanied by a video where they describe the work in the form of a short lecture, accompanied by a presentation. The formulaic, technical style of scientific writing, the heavy jargonization and the need for careful elaboration often renders reading papers a laborious effort. SciVee's creators hope that that the appeal of a video or audio explanation of paper will make it easier for others to more quickly grasp the concepts of a paper and make it more digestible both to colleagues and to the general public." -
Drug Reverses Effects of Sleep Deprivation
Ryan O'Rourke writes "According to a study led by Dr. Sam A. Deadwyler and published by the Public Library of Science Biology, a new drug called CX717 developed by Cortex Pharmaceuticals has been shown to reverse the biological and behavioral effects of sleep deprivation. Tests performed on monkeys that were subjected to 30-36 hours of sleep deprivation revealed an average test performance accuracy drop to 63 percent, but that performance was restored to 84 percent after administering CX717. During normal alert conditions, performance accuracy of the animals was improved from an average of 75 percent to 90 percent after an injection of CX717. It is also believed the drug may help prevent or restore memory loss in Alzheimer's patients." -
Free/Open-Access Academic Journals Growing
An anonymous reader writes "Wired News reports on the growing number of free/open-access academic journals. The Directory of Open Access Journals lists 1527 journals. The Public Library of Science (PLoS) is launching three new open-access journals this year: PLoS Computational Biology, PLoS Genetics and PLoS Pathogens. The National Institutes of Health's (NIH) Public Access Policy is also part of the movement. The traditional academic journals aren't happy, saying that it's unethical to accept money for publishing. But the traditional journals face their own ethical dilemmas by accepting money from advertisers." -
Two New PLoS Journals Launched
Shipud writes "The Public Library of Science journal series is expanding. After PLoS biology and PLoS Medicine we are now getting a geek's favorite: PLoS Computational Biology. Another addition is PLoS Genetics. Both are published open-access under the creative commons license. A history of open access licence publications in science can be found here." -
Two New PLoS Journals Launched
Shipud writes "The Public Library of Science journal series is expanding. After PLoS biology and PLoS Medicine we are now getting a geek's favorite: PLoS Computational Biology. Another addition is PLoS Genetics. Both are published open-access under the creative commons license. A history of open access licence publications in science can be found here." -
Public Library of Science Launches
limbicsystem writes "The first issue of the free journal Public Library of Science Biology hits the presses tonight. With Lawrence Lessig on the Board, the PLOS team are taking the Creative Commons to the world of science publishing and hope to compete with the big-name journals Science and Nature. The move towards freely-available scientific journals is supported by major funding bodies who are tired of seeing their grant money spent on subscriptions to commercial journals that can cost thousands of dollars a year. PLOS-Biology is available online at plos.org. The inagural issue has an essay by the executive director of the creative commons, Glen Otis Brown. Oh, and it's all running on Linux ;)" -
Open Source Science
Tim writes "A few days ago (June 26th), the "Public Access to Science" act was introduced to the House of Representatives. This act would ammend the US Copyright Act to "exclude from copyright protection works resulting from scientific research substantially funded by the Federal Government," in essence, requiring all federally-funded scientific research to be published as open content. The Public Library of Science has a press release with more information." -
PLoS Launches Open Access Biology Journal
Vojtek writes "An international grass-roots organization of scientists is lauching an open access journal, PLoS Biology, that will compete with existing publications. See PLoS.org for details. Read their FAQ, download and post their Poster, support their cause!" We've done several previous stories about these guys - this one is pretty thorough.