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Virginia Tech Announces Supercomputer Plans

CousinVinnie writes "Previously noted in this Slashdot story, the administration of Virginia Tech has announced they're puchasing 1100 G5's (another story) in hopes to build a top-10 supercomputer by October 1. Tech will be spending $5.2 million over five years on the project, which should help it pull in more research money." Maybe VT can use the new computers to beef up their web site.

53 of 419 comments (clear)

  1. This is quite cool but... by WinterSolstice · · Score: 4, Interesting

    Does anyone know who else was considered for this contract? I'd love to see the arguments for the different platforms!

    -WS

    --
    An operating system should be like a light switch... simple, effective, easy to use, and designed for everyone.
    1. Re:This is quite cool but... by EvilTwinSkippy · · Score: 5, Insightful
      Itanium: er, um, we have a new architecture! I think RedHat has a port to it.

      G5: We have a PowerPc system that has been extended to use 64 bits. Your old software will run. Your new software will run faster. We have MacOSx, BSD, and Linux available, natively compiled.

      There is also something to be said for the G5's parallel memory busses. It divides the ram in half, each half feeding 32 bits of the processor. You could theoretically keep your instructions on one side and data on the other, and pipeline the snot out of it.

      --
      "Learning is not compulsory... neither is survival."
      --Dr.W.Edwards Deming
    2. Re:This is quite cool but... by Kalak · · Score: 5, Interesting

      Dell and HP were considered, and Apple won based to a large degree on delivery date. There are more issues to computing than benchmarks, and in the issue of deliverability, Apple won. If you RTFA on the CT, they say it was on the speed and memory of the G5, but the geek grape vine, and hints from the Roanoke times article said availability to get it up in time to make the next top 500 comuter listing we big factors.

      Both Dell and HP have recently announced large clusters, so that may be why they were unable to deliver in time.

      --
      I am, and always will be, an idiot. Karma: Coma (mostly effected by .hack)
    3. Re:This is quite cool but... by BWJones · · Score: 4, Interesting

      Does anyone know who else was considered for this contract? I'd love to see the arguments for the different platforms!

      Well, considering that the G5 has many of the architectural features of those $40k SGI Octanes that I purchased a few years ago, I would consider that pretty impressive. In short, Apple designed the G5 machines with completely independent busses, so that saturating say an I/O bus will not have any effect on the throughput of say memory to CPU. They are pretty impressive and I can see why many folks who are currently using the Octanes etc... would want new G5's.

      So, you have a UNIX box with true plug and play, 64-bit, nice GUI, full CLI access, Firewire, USB, REALLY nice archetecture etc...etc...etc... All that makes for a pretty convincing argument for clusters moving to the G5's

      --
      Visit Jonesblog and say hello.
    4. Re:This is quite cool but... by hackstraw · · Score: 3, Insightful

      Itanium: er, um, we have a new architecture! I think RedHat has a port to it.

      I admin a cluster of Itaniums. They are very fast and have not had one single hint of a problem with them.

      To me, something that is completely unacceptable about the G5s for scientific use is that the machines do not support ECC memory!

      My users run up to 5 days at a time across 8-10 processors, and its not cool to get a wrong answer after that run, and possibly never know about it.

      I personally would not care to admin a cluster of Macs. I think they are excellent machines, but not for science.

    5. Re:This is quite cool but... by Krach42 · · Score: 3, Informative

      *ahem* The PowerPC architecture wasn't extended to support 64-bit. It was the IBM POWER architecture that was "extended" to support 32-bit from 64-bit. The original PowerPC designs were designed to be executably compatible with the POWER architecture.

      This is ENTIRELY unlike the x86 architecture, which has been extended to support 32-bit from 16-bit, and now is being extended YET AGAIN to support 64-bit from 32-bit from 16-bit.

      --

      I am unamerican, and proud of it!
    6. Re:This is quite cool but... by BWJones · · Score: 4, Funny

      multibanked ram is nothing new. it's been around since the 486 days for consumers (iirc), and much earlier in big machines, i'm sure. afaik, most mobosthese days are at least 128bits wide.

      Yep, my old Macintosh 9600 had a 128-bit wide memory bus if you used identical ram in each of the 12!! RAM slots.

      --
      Visit Jonesblog and say hello.
    7. Re:This is quite cool but... by Frobozz0 · · Score: 3, Insightful

      Apparently the PHD's at Virginia Tech disagree with you 5.2 million ($) times. Or 1,100 times, depending on your view of the world...

      --
      "Politicians find new names for institutions which under old names have become odious to the people."
    8. Re:This is quite cool but... by be-fan · · Score: 3, Informative

      Read the tech doc and see where that Hypertransport link is. In the Opteron, its between CPUs, which allows for a very low latency pseudo-NUMA setup. On the G5, its between the Northbridge and the Southbridge. Even low end Athlons these days have Hypertransport links there.

      --
      A deep unwavering belief is a sure sign you're missing something...
    9. Re:This is quite cool but... by SewersOfRivendell · · Score: 4, Informative
    10. Re:This is quite cool but... by Greedo · · Score: 4, Funny

      I think they are excellent machines, but not for science.

      Well, like ...

      One night, I was processing these gene sequences on my Itanium cluster, you know? When all of a sudden it went berserk, the screens started flashing, and, like, the whole result set just disappeared. All of it. And it was a good result set! I had to cram and resequence it really quickly. Needless to say, my rushed thesis wasn't nearly as good, and I blame those Itaniums for the funding didn't get, and tenure I lost.

      I'm happy to report that my sister and I now share an Apple G5 cluster. It's a lot nicer to work on than my old Itanium farm was, it hasn't let me down once, and my papers have all been really good.

      Thanks, Apple.

      Ellen Feiss, PhD

      --
      Tuus crepidae innexilis sunt.
    11. Re:This is quite cool but... by zerocool^ · · Score: 4, Informative

      identical ram in each of the 12!! RAM slots

      Dude, look at an old sparc sometime. Sparc 1/1+/2 had 16 ram slots, circa 1990. Of course, you had to fill 4 at a time. The max is 128 MB i think.

      ~Will

      --
      sig?
    12. Re:This is quite cool but... by bspath1 · · Score: 3, Informative

      Actually, PowerPC was designed as a 64 bit architecture from the ground up. The first implementations were 32 bit, although the PPC 620 was 64 bit AFAIR. The 601 was a hybrid PowerPC/POWER chip which supported both ISAs. The 603 and 604 chips were 32 bit PowerPC implementations and lacked the deprecated POWER instructions which were supported by the 601. IBM also went on to extend POWER to POWER2, POWER3 and a 64 bit implementation of POWER for their mainframes (RS64? and AS/400?). POWER4 is a unification of the 32 bit POWER and 64 bit POWER architectures which is also fully PowerPC 32 and 64 bit compatible. Note: the 970 is based on POWER4.

  2. cray by pheared · · Score: 3, Funny

    Burns: [throws his glass at Homer]
    You call this Postum?
    [bashes a 5-feet high pile of paper]
    Burns: You call this a tax return?
    [bangs a CRAY with his cane]
    Burns: You call this a supercomputer?

  3. Performance comparisons... by EvilTwinSkippy · · Score: 5, Funny

    The comparison is like Apples to Oranges. Most people end up asking "Orange you going to build a beowulf cluster of those Apples?"

    --
    "Learning is not compulsory... neither is survival."
    --Dr.W.Edwards Deming
    1. Re:Performance comparisons... by hackstraw · · Score: 3, Funny

      I hear this comparison of apples and oranges all the time.

      Aren't both fruits that grow from trees?

      How about comparing sea water and comets?

  4. Maybe... by Ieshan · · Score: 4, Funny

    Maybe Apple will use this G5 cluster against a single-processor itanium to show that, yes, they ARE the fastest personal computer!

    The only problem will be finding a desk big enough to fit the guys...

    1. Re:Maybe... by jmenezes · · Score: 4, Funny

      Well, reguardless of the performance of the itanium vs. the G5 cluster, at least you'll be saving on your electricity bill by going with the 1100 G5s....

      --
      Stop over-analyzing your analizations
  5. Anyone have any real specs? by anzha · · Score: 4, Interesting

    So far we've seen that it's a cluster and what the building blocks are. What's the interconnect? What's the OS? What are the nodes using for a network filesystem? Are they at all? Is this intended for parallel jobs or for embarassingly parallel work?

    --
    Do you know why the road less traveled by is littered with the bones of the unwary?
    1. Re:Anyone have any real specs? by mfago · · Score: 4, Interesting

      The interconnect is Infiniband by Mellanox. These things get 10Gbps bandwidth with 6us latency under MPI. Very decent stuff. There is more information at the site above.

      Note that 1100*$3000 = $3M. This doesn't include the 4GB RAM, but also doesn't include any volume discounts. Thus the interconnect may cost about $2M.

      Oh, and to the guy who said "4 Athlons + Myranet is the same price as one G5" -- can I have some of what you're smoking?

    2. Re:Anyone have any real specs? by JimRay · · Score: 4, Informative

      OS is SuSE as it supports Infiniband.

      Well, according to this story, the cluster will be running "a beta version of the latest release of OS X", presumably a beta version of Panther.

      If this is true, I'd bet, and this is purely a guess, that Panther and XCode, the new development tool built by Apple, have some support for cluster applications. With technologies like Rendezvous on top of Mach/BSD, it could mean beowulf style supercomputers that are both fast and easy to maintain.

      --
      My other computer is your Windows box
  6. Re:Overpriced G5s by SeanAhern · · Score: 4, Insightful

    Wait a minute - you're complaining about the cost of a G5, but go on to suggest they buy a Myrinet, a rather expensive interconnect. Something doesn't compute here.

  7. Obligitory Troll by Maskirovka · · Score: 5, Funny

    Slashdot summary:
    1) Itaniums are for pussies.
    2) Go Apple!
    3) Opterons still kick the G5's butt.
    4) I can't wait to run doom3 on my backordered G5.
    5) People griping about apples proprietary hardware and software, and how this cluster could have been built cheaper from oem parts, and ebay ethernet hubs.
    6)Dumb lists summarizing other trolls.

  8. Even more info ... by Pentagon13 · · Score: 4, Informative


    Here's the article from which the Collegiate Times article has paraphrased: http://www.technews.vt.edu/Archives/2003/Sept/0356 6.html

  9. Re:Apple ... supercomputer...? by tesmako · · Score: 3, Funny

    Oh nos!1!! The supercomputer will be all loud and stuffs! Whatever shall we do? It will be a pain to play quake on it and ecverything. A monumental failure this.

  10. What the hell do you do with 1100 mice? by Eclypser · · Score: 5, Funny

    Post suggestions here!

    --
    The comment has already been made. Let's move it along people. Nothing to see here.
    1. Re:What the hell do you do with 1100 mice? by daeley · · Score: 5, Funny

      I don't know what you'd do with them, but I'm sure some wanker on here is already complaining there aren't 2200 buttons. ;)

      --
      I watched C-beams glitter in the dark near the Tannhauser gate.
  11. PowerMac G5s? by foo+fighter · · Score: 5, Interesting

    Why aren't they waiting for the Xserve update? Rhetorical question, but still...

    I haven't seen one, but it looks like the PowerMac G5s are about 4U wide. 1100 x 4U = 4400U / 42 per rack ~= 105 racks.

    Not only is this going to take up an enormous amount of room, but the power and cooling requirements are going to be crazy as well. And they don't have rails so getting them in the racks, and working on them once in the rack, is going to be a PITA.

    1100 G5 Xserves would need only about 25 racks. Many fewer UPSes and A/C units to power in each rack. Much easier to install and work on.

    I know Apple is gung-ho about this validating their "Fastest PC Ever" claims. But it seems a little poorly thought out on the University's part even if they got a sweet up-front price on the machines. Remember: the system price is a small part of TCO.

    --
    obviously no deficiencies vs. no obvious deficiencies
    1. Re:PowerMac G5s? by jcr · · Score: 3, Insightful

      Why aren't they waiting for the Xserve update?

      What, there's an Xserve update?

      Take a look at the heat sinks in a G5. If you can figure out how to get that into a 1U enclosure, you might want to work for Apple in the hardware design group.

      -jcr

      --
      The only title of honor that a tyrant can grant is "Enemy of the State."
    2. Re:PowerMac G5s? by valdis · · Score: 4, Insightful

      To get it into 25 racks, you need to get it into a 1U form factor. At that point, cooling becomes an issue - you have 40 750W power supplies *per rack* then. We're talking about a space about the size of a phone booth, and the heat equivalent of 20 hair driers on HIGH all going at once. It's gonna get TOASTY at that point. Even if you consider a 2U and expanding out to 50 racks, that's still a lot of heat per square foot.

      Remember - the CPU and the memory are going to generate the same number of BTU/hour whether in a tower case or a 2U rack. And going to the *as yet unannounced* 2U just makes the cooling problem worse...

      Yes, we thought a LOT about these sort of issues.

    3. Re:PowerMac G5s? by fork420 · · Score: 5, Insightful

      Perhaps they have entered the Reality Distortion Field (TM).

      Apple's platform will probably work here, and once they prove it does, they will open a new segment of buyers, and gain plenty of positive attention. Apple's (recent) record suggests they will exceed expectations.

      As to the cost...the good PR that they can derive from a working G5 supercomputer is easily worth $10m on hardware. At the end of the quarter it's hardly noticable to a company sitting on $3,500,000,000.00 in cash.

      Apple gets to show MSFT they can scale OS X way past Windows. IBM gets to show Intel what it thinks of the Blue Lightning License arrangement, and Apple and IBM, by virtue of being together, get so give MSFT the finger...from way up the (top500.org) list. Not bad for their first try at this.

      ...and think about it from Jobs' perspective: This will be the biggest "Apple Computer" ever made. His ego can't handle this thing not kicking ass.

      --
      Don't forget that Pixar's always looking for high power hardware and they've got lots of new money.

  12. Ever changing focus shift.. by Rinikusu · · Score: 5, Insightful

    Anyone get the feeling that Apple might be pulling a Be, Inc and is trying to pull off a focus-shift?

    Remember Be, the "multimedia" OS turned "Internet Appliance". Remember the death of Be. (damn, that stings. I miss the BeOS.)

    Now witness Apple:
    For decades, seemingly the darling of the press-production (DTP) world, catering to artists of all magnitudes, it was the computer you used to create real, bona-fide art. It attracted the freaks, the hippies, the art chicks. For many people, this was unnerving. Different people get "different" looks.
    Now who's Apple targetting?
    With OS X, I'm thinking geeks. We're different people, too, but in a, well, different manner. Instead of the artists, Apple's going for traditional suits, the realm of IT. It may be a matter of sheer survival that Apple penetrates here, because they don't stand a chance in these days of "homogenous" work environments.. Out with Apple (even if it works) and in with Dell WinXP machines! Linux faces the same dilemna, although Linux has some other benefits/detriments for it's widespread adoption. If Apple can show it's worth in the server room (just like Linux is doing), then maybe, just maybe, they'll start looking at Apple on the corporate desktop (just like Linux is doing).
    Now, the idea of catering to suits is somewhat.. frightening. The whole damn market is different. They don't care about "look and feel", they care about numbers (see economic downturn, outsourcing to India, massive layoffs, H1B abuse, etc). This means Apple will have to change from being "cool" to utilitarian. But wait, I think I just painted myself into a corner here... Wasn't that the point of Apple? To be a tool and not an obstacle? Instead of creating computer art, we're now creating databases? Maybe Apple is on to something here...

    --
    If you were me, you'd be good lookin'. - six string samurai
  13. Argument for G5 here. by eddy · · Score: 5, Interesting

    I'd love to see the arguments for the different platforms!

    I think the argument for G5 came from here.

    --
    Belief is the currency of delusion.
  14. Re:Overpriced G5s by SeanAhern · · Score: 4, Insightful

    to get any reasonable super-computing power out of it, you would need a low latency (expensive) interconnect.

    Well, that very much depends on what type of computing you're doing. Some scientific computing is more tolerant of high-latency environments and would rather have the bandwidth.

    I can't seem to find the quote from any of the articles right now, but VT is planning on using an Infiniband interconnect from Mellanox. While I don't know the relative price points, they are touting the fact that this is a high-speed interconnect that's faster than Myrinet or Quadrics at a fraction of the cost. I can't say for sure, since the Infiniband cluster we're helping to build at Stanford is not yet assembled.

    This should be interesting to watch. I'll be very interested to see the $/gigaflop ratio for VT's cluster (though that doesn't have a bearing on the interconnect).

  15. "Beef up their Website" by suwain_2 · · Score: 4, Insightful

    Can someone explain the " Maybe VT can use the new computers to beef up their web site" comment? It loads perfectly fast for me. It looks pretty good. It even runs PHP, so it couldn't be a "They shouldn't use ColdFusion" type remark.

    Am I missing something, or was that just a completely random comment?

    --
    ________________________________________________
    suwain_2 :: quality slashdot p
    1. Re:"Beef up their Website" by zerocool^ · · Score: 4, Informative

      It had better run freaking fast. Virginia Tech has had an OC-3 for at least 6 years, and I think they're upgrading to hook into network virginia's bigger pipes.

      For those out of the loop, network virginia is a partnership between verizon (local loops), sprint (borders and pipes), and Virginia tech (expertise and tech support). A few years ago, they had 2 OC-3's from Northern Va to roanoke, 1 to richmond, and 1 from roanoke to richmond. Their updated network topology map can be found by clicking here. The bottom one is the latest one. At any rate, they've got multiple OC-12's running from Nova to Roanoke, mainly because of VT. Tech may already be hooked into the OC-12's, i'm not sure.

      Also, I'm not sure about how much will be lost in clustering, but according to the CT article today, the dual 2.0 Ghz G-5 can pull 14 teraflops by it's self. If we're getting 1100 of them, say, drop ~10% for overhead, that would still put us up at 14000 teraflops, which is ahead of ascii white and behind los alamos.

      Also: regarding power requirements and all of that - we have several state of the art facilities on campus for this kind of stuff, including the VT Corporate research center and Torgersen hall (home of the center for advanced computing and where we keep all the fun VR rooms and stuff). There's a power plant on campus. We never lost power when I lived in a dorm, not during snow storms or huge thunderstorms or anything. It supplies power for most of blacksburg, too. Shameless plug, but that's one selling point for the company where I work, netmar, because we get our power from the VT power plant, and it's about 2.5 blocks away, we hardly ever lose power for more than 2 minutes, so we haven't had to put our generators to work in forever. Nowadays, we just test them with the remote start to make sure they're working, and to scare people that are hanging around the generator hut.

      Anyway, VT has no problems finding a place for these things to go, and will have no problem providing power for them. Climate control should be no problem, either. For starters, it's easy to cool things in blacksburg, cause it hasn't been above 100 degrees in 100 years here.

      Some people in my econ class today were talking about why are we doing it, and what's it going to be used for. Really, I think we're doing it to get grant money and sponsorships/funding, because with the economic situation in VA, we're scrambling to find money. We've had to drop teachers without replacing them and cut back on services all over (no more trash cans in dorm hallways, you have to take your own trash outside, can't afford the maintinance staff). Also, the Vet school will get a lot of use out of it. That's the "virginia-maryland regional college of veteranary medicine". They're looking for ways to cure problems with small bacteria instead of drugs (i'm not clear on the particulars, that's the impression i got). They're going to try and track what happens to something when it's introduced into an animal or something. Anyway, they'll use it, as will VT's engineering school, which, despite being tied for like 73rd on the list of top schools, and inexplicably 55 positions behind UVA, is an excellent program and produces excellent engineers.

      ~Will

      --
      sig?
  16. You should watch out by jbarket · · Score: 4, Funny

    Jokes like this can get you put away in the punatentury for a very, very long time.

    --

    -----
    jonathan barket
  17. Sounds fine by Doesn't_Comment_Code · · Score: 3, Insightful

    There are a bunch of people posting gripes that this was a bad idea. But I don't think it's that bad. We should at least withold judgment until we see some data. One thing's for certain, it will outperform YOUR cluster.

    Among the top complaints were:

    You could buy several AMD's for that.
    You might be able to, but the G5's they are buying already have 2 very good processors. As long as they're dividing up tasks among processors, it's nice to have all the memory management and overhead taken care of at a level of two processors per node instead of one. To be honest, I've never seen it done before, and it could have very interesting results.

    The Mac's aren't designed for this sort of thing.
    We don't know all the details of this cluster because they weren't all mentioned in the story, but my hunch is that Apple might cater to them a little if they are offering to dump $5 mill on a cluster. They might package the cases differently (sans curvy plastic or with shared power supplies).

    Anyway, when it comes to speed of high precision calculations, the G* chips have proven their worth. And most High Science applications fall into that range of operation. We all know that clustering and distrubuting is touchy. The cost and speed don't scale linearly. And the cost vs speed ratio definately doesn't scale literally.

    There is a possibility these computer science professors know something. So we might want to see how this thing performs before we rush to judgement.

    --

    Slashdot Syndrome: the sudden, extreme urge to correct someone in order to validate one's self.
  18. "speculation and rumor"?? On /.?!? by sczimme · · Score: 4, Funny


    Lots of speculation and rumor, too, if you're into that sort of thing.

    This is slashdot! We're all about speculation and rumor. Innuendo, too, especially on the weekends.

    Oh, and sentence fragments.

    :-)

    --
    I want to drag this out as long as possible. Bring me my protractor.
  19. Re:Overpriced G5s by 11223 · · Score: 5, Insightful
    OK, a few relevant points here:

    • Myrinet sucks. No, really. It does. It eats CPU when sending data. It generally does not perform as well as Infiniband. It has higher latency. Once you start using this for real work (outside of what are known as "embarassingly parallel" problems, which are fine with 10baseT), those factors will play into your performance to a huge degree.
    • AMD fanboys, take note: The G5 does have superior floating-point hardware, for either double precision superscalar or vector single precision work. If they're doing floating point the G5 is a clear win.
    • The memory bus on the G5 is a bit better than on the Opterons - especially once you start doing threaded work, the dual unidirectional buses essentially allow cache transfers at the same time as memory transfers, and a whole bunch of other possibilities.
    • Lastly, what are you smoking? The only way an AMD becomes competitive with a G5 (machine to machine here) is if you build the AMD yourself and leave out the stuff the G5 has in it. Are you suggesting that Virginia Tech build 1100 Opteron, no, 4400 Opteron systems (you said 4x, not me!) themselves? That's crazy. They want somebody else to build and test the machines, and that somebody to be responsible when they fail. Of course such a real-world advantage has little to do with the bubble most /.ers live in, because they build their Athlons themselves. Perhaps the reality distortion field merely applies to introducing reality to people who have never seen it before.
  20. I keep overestimating slashdot... by Lally+Singh · · Score: 4, Informative

    Lots of "WHY?" questions, with lots of pointless trolling on the G5; but none of them actually look for answers. Mostly just more idiots who can't understand that a good vendor is important; that their own time is important; that ease of use is even more important now than it ever has been before. Luckily, these same idiots spend all their time setting up sendmail over their 14.4 modem. As for the G5, here are some strongpoints for it: - A fast memory pipe (1GHz) - Good heat management (9 fans but it's quieter than its predecessor) - Damn good FP performance (To get comparable FP performance on intel, you have to use the -fviolate-ieee flag on gcc, think about that) - Vendor-installed, vendor-supported Unix, with the vendor employing the entire OS's development team. - Fast system interconnects with network & I/O - Easy system setup (this matters a lot when you've got 1100 of them) - Proven apple reliability (and if you're going to fight this one, have something better than "is not!") (again, very important when you've got 1100 of them) Oh yeah, and OS X. Mach microkernel, Rondezvous, and distributed builds in the default toolset. Again, the idiots I mentioned above wouldn't have a clue about this stuff. As for _why_ VT getting this, VT's one of the largest engineering schools in the country. We've gotta simulate airflow over wings, heat propogation over materials, and other stufff this CS major doesn't understand. And we've got big development in bioinformatics. All kinds of CPU to crunch. AFAIK, the cluster's being paid for by federal grants or something like that. And now fools, flame me. Prove me right.

    --
    Care about electronic freedom? Consider donating to the EFF!
  21. Re:Apple ... supercomputer...? by Phroggy · · Score: 5, Insightful

    the fan configuration will make it extrordinarily loud

    Apple specifically engineered these systems to be quiet - the compartments are set up the way they are so they can get maximum airflow with minimal blowing. Just because you think "loud" when you hear nine fans doesn't mean they're actually any louder than anything else. You're spreading FUD.

    it's built to cater to the end user, not to the embedded machine market.

    Perhaps your definition of "embedded" is different from mine, but I'm pretty sure it doesn't fit this application. This is a supercomputer cluster. However you are correct that these machines were designed to be desktop computers. Apparently that's not all they're good for.

    Many companies build physically smaller machines that still pack a lot of power,

    Yeah, so does Apple, but these are faster.

    or sell parts to allow someone to design their own layout in a chassis.

    If Virginia Tech wants to order 1,100 of them, don't you think Apple would be flexible if this was a concern?

    Remember, individual cases, power supplies, and the like become way overkill in such a large computer, and it would probably be cheaper to convert electricity once for a large section of the computer, supplying 12v, 5v, and 3.3v without each computer converting itself.

    This is an interesting point I hadn't considered. Feeding 110v into each of 1,100 individual power supplies can't be as energy or heat efficient as what you describe. However, it's possible that they will actually be doing this - I don't think I've seen it mentioned anywhere.

    Another consideration - apparently VT was pressed for time and they needed something that would be available quickly; Apple was able to deliver quickly. This may explain why they'd be more inclined to use stock off-the-shelf boxes instead of something more customized.

    --
    $x='S24;r)>63/* h@<5+oZ)32"5cz';$me='phroggy'x$];
    $x=~y+ -xz+\0-Tx+;print$_^chop$me for split'',$x;
  22. Re:Overpriced G5s by Brahmastra · · Score: 3, Insightful

    Myrinet eats CPU when sending data?? You must be using the suckiest driver and firmware possible. And Infiniband has lower latency than Myrinet???? Infiniband is a combination of protocol and hardware and actually Infiniband has slightly higher latencies than the best MPI implementations on Myrinet. Myrinet is a just a piece of hardware. You can write firmware in Myrinet to do almost everything in the Lanai processor present in the card itself, without consuming any CPU cycles. The performance you get out of Myrinet entirely depends on the libraries you are using.

  23. Re:Apple ... supercomputer...? by alfredo · · Score: 3, Interesting

    Apple has won other contracts by being able to act quickly. When the Postal Service needed to set up an intranet, everyone said one to two years. Apple using WebObjects was able to do it in 6 months. At the time the Postal Intranet was the largest in the world.

    --
    photosMy Photostream
  24. OS X 10.3 by Srsen · · Score: 4, Funny

    As it turns out, this is the minimum recommended system configuration to run OS X 10.3 Panther.

  25. Re:1100 G5s or PC processors ... by tmasssey · · Score: 4, Insightful
    This is a common mistake: confusing a supercomputer (or worse, a cluster) with a mainframe.

    Mainframes have one job: to move data from point A to point B as quickly as possible, while doing a relatively minor amount of processing on the way. Mainframes are what you use when you want to process every ATM transaction that happens around the world, all at the same time. In fact, your average mainframe is not really any more powerful than a dual- or quad-CPU Intel server, raw processing wise.

    Supercomputers are the exact opposite. They're stacks and stacks of CPU's that process largely independent chunks of data. They do huge amounts of processing on each chunk of data. They do *not* move data particularly well. In many cases, supercomputers are held together with Gigabit Ethernet. That's not exactly *fast*...

    Different computers, different tasks.

  26. The G5 really is all that. by GPS+Pilot · · Score: 3, Interesting

    Read why here.

    --
    That that is is that that that that is not is not.
  27. Re:enjoy your tuition increases kids by ukyoCE · · Score: 4, Informative

    It is a troll because the money for the supercomputer came from a NSF grant for that specific purpose. Furthermore the university expects to make a five-fold return, as have most universities in the top-x supercomputers.

    Have you ever been to VT? We've got construction going on all over the place. The football stadium is about to get another "upgrade" after having received on just a year or two ago. We've got major construction going on in at least 3 different places, not to mention many smaller construction projects.

    Meanwhile teachers are getting let go, classes that were taught in 30-person rooms 3 years ago when I started, are now taught in 400+ person lecture halls.

    Does it suck? Certainly. However the money for the construction projects, football stadium, and supercomputer are all from grants, donations, and other means intended for a specific purpose. They can not legally take the money from a supercomputer grant or football stadium donation and use it to pay a teacher's salary.

    We have uneducated rants in the school paper at least once a week saying "why are we upgrading the football stadium if we cant pay teachers!@#$"

    Yeah, it does suck, but the university has no choice in the matter.

  28. FIRST reliable supercomputing facility... by TekkaDon · · Score: 5, Informative

    Or so they claim here. It seems they have all their bases covered and don't give a damn about ECC for a reason.

    [Srinidhi Varadarajan, an assistant professor of computer science at Virginia Tech, and Jason Lockhart, director of the College of Engineering's High Performance Computing and Technology Innovation, initiated the venture at Virginia Tech. Varadarajan is an expert in reliability, a key issue in successfully exploiting terascale computing.]

    They keep on going:

    [Component failures are endemic to any large-scale computational resource. While previous generations of supercomputers engineered reliability into systems hardware, today's high performance computing environments are based on inexpensive clusters of commodity components, with no systemic solution for the reliability of total machine.]

    And now for the solution for your reliability problem.

    [Virginia Tech has the first comprehensive solution to the problem of transparent fault tolerance, which enables large-scale supercomputers to mask hardware, operating system and software failures - a decades old problem. It's a software program called Deja vu, designed by Varadarajan. He also integrated the software with Apple's G5s. This work will enable the terascale computing facility to operate as the first reliable supercomputing facility, according to Varadarajan, a National Science Foundation Faculty Early Career Development Program (CAREER) Award recipient.]

    So maybe, just maybe, you and other people could:

    1. READ before posting.

    2. Then READ a little more.

    3. Did I say READ already.

    -sigh- Whatever.
  29. Specs from an involved student... by Coocha · · Score: 5, Informative

    My boss here at VT is a volunteer for this project... they've been designing and building rackmount shelf-type units to store all these new G5s, as well as helping with the cooling system. Here's some info he gave me.

    The cluster will eventually run Mac OS 10.27... he said eventually, and Jason Lockhart, the project leader, is a friend and fellow Linux geek of mine (please don't hammer his inbox ;-), so there's a chance that he might use some PPC distro at some point.

    Interconnectivity will be done with Cisco equipment, among the onboard gigabit LANs. Infiniband cards will also eventually be installed for 10 Gbit throughput.

    You guys can offer alternative solutions and troll this as much as you want, but this is what VT is going with. In my opinion, it's not a bad choice... the New IBM PPC chipset is balls-to-the-wall computing, and Apple's 'stock' offerings in the G5 (Gbit ethernet, serial ATA, etc.) are all strong selling points. The fact that this cluster is intended for intense vector and matrix-based algorithms is another bonus, b/c of the PPC vector processing unit.

    Apparently Apple shifted us up to the top of their production ladder, in order to make the contract, thereby extending the wait times for consumers itching for a G5... I find that a little humorous. Can't wait to see gigaflop statistics!!

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    May the threads progress competently.
  30. Rumors getting closer by Kalak · · Score: 3, Interesting

    In talking to the person who is recruiting me to help lug the computers around when they arrive, the OS is to be OS X 10.2.7 on arrival, with plans to upgrade to Panther upon it's release. Straight out-of the box releases, with NetBoot planned to be used to distribute the images to each computer. This contradicts the rumors I've heard before, but is closer to a source who is on the planning team, who is too damn busy to talk to a luser like me.

    Those who are possible volunteer recruits, there is an info session in Andrews ISB in the Corp. Research Center at 7:30 tonight and tomonrrow night (same presentation both nights). You *cannot* be on wage for VT to be elegible. I'm not sure if GAs count as this, since I'm not one, I didn't check.

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    I am, and always will be, an idiot. Karma: Coma (mostly effected by .hack)
  31. Re:Apple marketroid by Anonymous Coward · · Score: 4, Informative

    Well I don't know about other science work but my dad does AIDS research and they use Macs exclusively in their labs for all of their model simulations and experiments. There's apparently a lot of biology research software that is available only on the Apple platform as well. I guess maybe because of their ties to educational institutions over the years?

  32. Re:Apple marketroid by BWJones · · Score: 3, Interesting

    Wonderful: three pointers to Apple's web site, pointing to pages with slick corporate "interviews". Do you actually work for Apple or are you just insanely zealous?

    There are an awful lot of scientists using Macs for their research and work. I use them almost exclusively now after retiring my SGI's in favor of the OS X boxes and judging from the meetings I attend, I would say Macs have anywhere from 10-40% penetrance in science depending upon the subfield. For instance the last vision meeting I attended (ARVO, the big one for the vision research community), there were Powerbooks and iBooks everywhere. Probably a good 33% of the laptops I saw.

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