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Quantum Mechanics Involved In Photosynthesis

Kristina at Science News writes "We all learn about photosynthesis in school: sunlight in, plant food out. Not well understood is how this process achieves its initial and uniquely high efficiency in capturing the energy of a photon. Quantum mechanics may be at work in the electron transfer process inside chloroplast, giving electrons the chance to consider many paths at once before choosing the best one."

38 of 137 comments (clear)

  1. That's Some Mighty Fine Learnin' Kristina by eldavojohn · · Score: 3, Informative

    We all learn about photosynthesis in school: sunlight in, plant food out.

    Huh, apparently some of us learned about it differently than others. I seem to recall it having to do with water and carbon dioxide in and some extra oxygen left over?

    Also, I think someone beat you to the punch back in 2007 when we covered this story the first time and we covered that part about the birds using quantum effects in 2008.

    --
    My work here is dung.
    1. Re:That's Some Mighty Fine Learnin' Kristina by Red+Flayer · · Score: 4, Informative

      Huh, apparently some of us learned about it differently than others. I seem to recall it having to do with water and carbon dioxide in and some extra oxygen left over?

      [CO2 and H20 in, O2 and long-chain organics out] is ancillary to the photosynthesis process. Photosynthesis is sunlight in, e- out (plus some ADP-->ATP goodness).

      Electrons, then, are the plant food that is used to synthesize long-chain carbons.

      I think maybe you never took advanced bio or molecular bio or any other classes that would have covered this more in depth than the simplified HS bio crap?

      --
      "Trolls they were, but filled with the evil will of their master: a fell race..." -- J.R.R. Tolkien on Olog-hai
    2. Re:That's Some Mighty Fine Learnin' Kristina by eln · · Score: 5, Funny

      It's been a long time since I've taken a biology class, but the way I remember it is the sunlight hits the plant and the plant makes food with it, like tacos. Also, I think some birds fuck some bees or something. It's all very confusing.

    3. Re:That's Some Mighty Fine Learnin' Kristina by sdguero · · Score: 3, Funny

      In outdoor school we learned with the jingle bells rhythm:
      Xylem up.
      Phloem down.
      Oxygen release.
      Oh what fun it would be if I could be a tree!

      Or something like that...

    4. Re:That's Some Mighty Fine Learnin' Kristina by Translation+Error · · Score: 5, Funny

      Ah, yes... I remember being told about that last part in The Talk from my parents. I was afraid to go outside for weeks.

      --
      When someone says, "Any fool can see ..." they're usually exactly right.
    5. Re:That's Some Mighty Fine Learnin' Kristina by Randle_Revar · · Score: 4, Informative

      >Also, I think someone beat you to the punch back in 2007 when we covered this story the first time [slashdot.org]

      yeah, but about halfway though the article, they finally start talking about the new (post-2007) discoveries and refinements to this idea.

  2. "Quantum mechanics may be at work" by BlueParrot · · Score: 4, Insightful

    The process involves photons that are absorbed while exciting the energy of molecules OF COURSE quantum mechanics is involved. Coming up next, thermodynamics may be at work in volcanic eruptions.

    1. Re:"Quantum mechanics may be at work" by should_be_linear · · Score: 3, Informative

      I actually read TFA and from what I understand, plant is using quantum computing to solve sort of Traveling Salesmen Problem (TSP) in constant time. TSP belongs to the class of NP-complete problems. Thus, it is assumed that there is no efficient algorithm for solving TSP problems on non-quantum computer.

      --
      839*929
    2. Re:"Quantum mechanics may be at work" by Zatacka · · Score: 2, Interesting

      There is no reason to believe NP-complete problems can be solved in polynomial time (let alone constant time) on a quantum computer.

    3. Re:"Quantum mechanics may be at work" by Zatacka · · Score: 2, Informative
      I'm not always the biggest fan of quoting Wikipedia but here goes:

      There is a common misconception that quantum computers can solve NP-complete problems in polynomial time. That is not known to be true, and is generally suspected to be false.[24]

      'Nondeterministically' guessing the answer won't be enough. There is a class called BPP that concerns those algorithms classically, quantum computing goes further, but might still not be able to solve NP-complete problems fast. You say "an NP problem is one that can be solved in polynomial time", but you either meant that the answer can be checked in polynomial time or that you know P=NP. In the last case large amounts of fame and money are waiting on you.

  3. The more important question by bonch · · Score: 2, Funny

    Is there any way to incorporate string theory, membranes, dimensions, time travel, or wormholes into this explanation? Kaku has some speaking engagements and needs some buzz words along with the usual Star Trek references.

  4. Comment removed by account_deleted · · Score: 4, Funny

    Comment removed based on user account deletion

  5. Quantum Mechanics by prakslash · · Score: 4, Funny

    Is it just me or is everything now being explained through Quantum Mechanics?

    Don't understand why people make irrational decisions?
    Quantum Mechanics may be at work.

    Don't understand how photosynthesis happens?
    Quantum Mechanics may be at work.

    Don't understand contradictions in quantum mechanics?
    Well, that is because sub-atomic paticles may have free will?

    Can't we just credit God or something?

    1. Re:Quantum Mechanics by Roger+W+Moore · · Score: 3, Informative

      Is it just me or is everything now being explained through Quantum Mechanics?

      No it is not just you. Practically everything is explained through QM. The only exception being gravity which we think is governed by QM if only we can find the right model.

    2. Re:Quantum Mechanics by BJ_Covert_Action · · Score: 2, Funny

      Can't we just credit God or something?

      We do, its called the Higg's Boson....haven't you been paying attention? Sheesh...

  6. Of Course It "Uses Quantum Mechanics" by Doc+Ruby · · Score: 3, Informative

    Quantum mechanics isn't some tool in nature's toolbox. QM is a way that humans describe all natural phenomena when we explain details of how it all works. QM is a universal framework for describing all the actions of everything that exists.

    If scientists are coming up with a new QM description of a physical process like photosynthesis, it's not because they're just discovering that QM is involved. It's because they're figuring out how to describe the process in terms of QM.

    In other news, physics turns out to be involved in how the brain works.

    --

    --
    make install -not war

    1. Re:Of Course It "Uses Quantum Mechanics" by mdielmann · · Score: 2, Interesting

      The difference is, some things can be adequately described without QM. What they're saying is, photosynthesis can't. I can explain plenty of things in Newtonian physics, some more in General Relativity.
      It's kind of like when they discovered how flies fly a few years back. Sure, we knew they could fly, we even knew a great deal about the mechanics involved. But to really figure it out, they had to do some serious testing. What they learned is that flies use 3 different techniques to generate lift, in every flap of their wings. That's what was new in that particular study.
      Greater understanding comes one step at a time. Given what we know now, perhaps we can build better devices to harness light energy. Or perhaps it will take us in a brand new direction. We'll see.

      --
      Sure I'm paranoid, but am I paranoid enough?
  7. Well, duh. by Sans_A_Cause · · Score: 4, Funny

    We've been teaching that in physical biochemistry courses for decades. With examples. This is like saying "gravity may be at work in planetary orbits."

  8. Quantum Tunneling by freefrag · · Score: 2, Informative

    It is not new at all that quantum tunneling is an important mechanism in the electron transport chain. The iron-sulfur centers are optimally positioned to optimize the tunneling rate of electrons between them. They knew about this several years ago, when I learned this in an undergrad biophysics class.

  9. At Last! proof of the non-existance of God by Rene+S.+Hollan · · Score: 3, Funny
    God: "I refuse to prove I exist, for proof denies faith, and without faith I am nothing."

    Man: "Ah, but look at quantum photosynthesis. That something so incredibly convenient to life (plant and herbivore and omnivore animals) should arise by accident is inconceivable. It proves you exist, so therefore you don't."

    God: "Oh dear, I hadn't... <logic>puff</logic>

    --
    In Liberty, Rene
  10. Newsflash.... by tnk1 · · Score: 3, Interesting

    Science has now discovered that one of the more universal concepts in physics applies to... just about everything above the subatomic scale!

    News at 11.

  11. Shouldn't we be terrified now? by SnarfQuest · · Score: 2, Funny

    Quantum mechanics has something to do with nuclear bombs, don't it? Shouldn't we be screaming in panic, that our plants might explode like a nuclear bomb at any second? You can't trust those plants, sitting creepy still all the time, plotting our nuclear destruction all the time. We should destroy them all, before they get us!

    Oops, forgot to take the blue pill. Take the blue pill now, not the red one.

    --
    Who would win this election: Andrew Weiner vs Andrew Weiner's weiner.
  12. A step closer to the brain as a quantum computer by Douglas+E.+Fresh · · Score: 2, Insightful

    This research has science a step closer to showing that the brain functions as a quantum computer. Having a quantum computer in our head would explain why we're not like classical computers and have "intelligence", "free will" and "awareness."

    Scientists who dismiss quantum processes at work in the body due heat and other quantum noise have little imagination to realize how exquisitely nature works on the molecular level to solve problems like these.

  13. All chemistry, most physics by Roger+W+Moore · · Score: 2, Insightful

    Nearly everything involving chemistry is governed by quantum mechanics...

    Actually all chemistry is governed by quantum mechanics. In fact practically everything we can explain is governed by quantum mechanics, the only exception being gravity and even then we think it is governed by QM we just have not found the right model. Of course for things that happen at human scale it is often easier to use a continuum-based approximation of QM...but it is still an approximation of the underlying QM.

  14. Except gravity by Roger+W+Moore · · Score: 2, Interesting

    QM is a universal framework for describing all the actions of everything that exists.

    Except for gravity. We can quantize this but only if we put in an artificial energy cut off. Of course most of us physicists believe that there is a proper QM description of gravity to be found but we have not yet do so so we cannot yet say that it is described by QM.

    1. Re:Except gravity by Doc+Ruby · · Score: 3, Interesting

      Sure, but QM is still a framework for describing everything that exists. That doesn't mean it's a complete framework, even though it's largely complete, and more complete all the time.

      Photosynthesis is fully described by QED. That doesn't mean that photosynthesis "uses QM", any more than it "used phlogistons" if it were described analytically in the early 1800s. Or rather, photosynthesis "uses" QM, or phlogistics, or whatever other framework is being used to describe photosynthesis more or less accurately.

      The point is that QM is not a process, like "electron cascade", that photosynthesis "uses". It's a framework within which to describe processes like electron cascades that photosynthesis uses.

      If we were describing photosynthesis solely in terms of gravitational phenomena, then it might be remarkable to say that our explanation uses QM to describe what happens, because QM doesn't accurately describe gravitation. But that's not what we've got in this case.

      Besides, the QM of photosynthesis has been described for quite a while. A new wrinkle in it does not merit a headline announcing that QM is involved.

      --

      --
      make install -not war

  15. Re:Srsly? by nine-times · · Score: 4, Insightful

    Unless you doubt the validity of the field of quantum mechanics, then you probably have to acknowledge that it's "involved" in all physical phenomenon. I mean, when you ask for an explanation of a specific phenomenon, you might want to know more about the larger scale interactions and forces, but still, electrons are involved and they're doing stuff. Probably all sorts of quantumy stuff that would blow your mind.

    However, it does seem like quantum mechanics would turn up as much more relevant when you're talking about the conversion of light into some kind of energy a living organism can use. When you get down to the level of trying to analyze what happens to an individual photon in the process, I don't know how anyone expected to avoid talking about quantum mechanics.

  16. Photoelectric Effect by jd · · Score: 3, Interesting

    It's covered in physics, to the extent that photosynthesis and the photoelectric effect are used to demonstrate photons must have momentum. (The law of conservation of momentum requires that the momentum going in equals the momentum coming out, so if the electron has momentum, then the photon must also.)

    --
    It's a small world and it smells funny; I'd buy another if it wasn't for the money; Take back what I paid (SoM)
  17. Re:A step closer to the brain as a quantum compute by Eivind+Eklund · · Score: 2, Insightful
    On the other hand, so would our brains functioning like neural networks and using fuzzy symbols to represent "self" - which would be the natural way for a neural network to work. And, lo and behold, that's how the brain happens to be wired on a classical physics level...

    Eivind, who don't doubt that there's quantum effects going on in the brain, but see no need for them for explaining "intelligence" or "awareness", and know enough psychology to not see any need for "free will" to describe how the mind works.

    --
    Doubting the existence of evolution is like doubting the existence of China: It just shows that you're uninformed.
  18. Re:A step closer to the brain as a quantum compute by MoellerPlesset2 · · Score: 5, Insightful
    First, I should mention that I actually do quantum chemical studies of biochemical systems for a living (indeed my username here is a QC reference). So I know something about this subject.

    To be honest, the result here, while important, is entirely unsurprizing. What you're dealing with here is bound electrons, moving from say, a chlorophyll group to a tyrosine amino acid residue. There's nothing knew that electrons, in particular bound electrons (such as in an atom or molecule) can only be accurately described quantum-mechanically. Electrons move through QM 'tunneling' quite a bit, so you simply cannot accurately describe electron-transfer kinetics (which is what's going on here) without QM.

    This research has science a step closer to showing that the brain functions as a quantum computer. Having a quantum computer in our head would explain why we're not like classical computers and have "intelligence", "free will" and "awareness."

    No, it does not. First off, it spells trouble that you seem to view that as a desired end result. Hardly a good way to do science. Second, there is no good reason to believe that the brain cannot be described in terms of straight-up chemistry and biochemistry. We don't know how the brain works, but that doesn't mean it's unexplainable in terms of what we already know. There are plenty of things we haven't fully understood in biochemistry, but that doesn't mean they're generally believed to be unexplainable in the current framework of things. Occam's razor would dictate that that idea should be disregarded until there is some evidence that would make it necessary. No such evidence exists.

    Further, your 'philosophical' points are simply invalid. Quantum mechanics says nothing about 'free will', or philosophical determinism for that matter. Quantum mechanics can be interpreted in either way, and has; e.g. the Copenhagen interpretation is nondeterministic, whereas the Bohm interpretation is.

    Scientists who dismiss quantum processes at work in the body due heat and other quantum noise have little imagination to realize how exquisitely nature works on the molecular level to solve problems like these.

    I work with applying quantum mechanics at the molecular level, in biochemical systems, all day long. I have yet to find anyone in my field who thinks there are macroscopic quantum-mechanical processes going on in the human body. That is not due to lack of imagination, it's due to experience with actual quantum mechanics. All chemistry is inherently quantum mechanical. Physics cannot explain an atom even, much less a molecule, with classical theory. The relationship between chemistry and biochemistry is well-understood. The quantum mechanics of chemistry is fairly well understood (due to people doing what I do). And transition in the chemical domain from what is quantum-mechanical to what is classically describable is also well understood. There is simply no physics that explains how or why quantum mechanical effects would disappear and then re-appear orders of magnitude 'upwards' on the scale of matter.

  19. Re:A step closer to the brain as a quantum compute by narcc · · Score: 3, Interesting

    Quantum computers are Turing reducible. It doesn't matter if your computer is classical or quantum, they can still only solve the same kinds of problems. This goes for the brain as well. (For the philosophers, this means that we cannot so easily escape from Searle's Chinese room.)

    All of this quantum mind nonsense seems to have stared with Roger Penrose and his ridiculous "theory". (Read: Shadows of the mind and The emperors new mind) He not only claims that the brain is a quantum system (possible, but totally unfounded) but also proposes a formula by which we can calculate how conscious something is! (He bites the ol' ontological bullet really hard, and goes on to claim that even an electron can be conscious, but only a little bit and only once in a great while.)

    This article:
    http://www.sciencemag.org/cgi/content/summary/287/5454/791?ck=nck
    Very clearly outlines the biggest problems for the theory. This is likely where the "Brain is too hot" argument originated. It's a good one, and not likely to go away anytime soon.

    More importantly, even if mother nature managed to work around the problem of a hot brain, it still doesn't get us any closer to consciousness. (See my first paragraph above) In the Penrose-Hameroff model, consciousness appears magically during collapse of the wave function. How they came to such a conclusion is beyond reason. That isn't science, it's mysticism.

  20. Re:Srsly? by jd · · Score: 2, Funny

    I dunno. More people seem to be interested when the guy has a magician's hat than a scientist's lab coat.

    --
    It's a small world and it smells funny; I'd buy another if it wasn't for the money; Take back what I paid (SoM)
  21. Re:Quantum mechanics may be at work by Bemopolis · · Score: 5, Funny

    In other news, Kansas has passed legislation to allow the teaching of alternate theories of photosynthesis, including Intelligent DeShine. This theory argues that plants produce food from sunlight by the mediation of "christons", which have the mystical property of being three particles in one, allowing them to convert the sunny warmth of the 6000-year-old Sun into original sin-free gluten.

    You didn't think the Eucharist was made out of wheat by accident, did you? Heathen.

    --
    "I guess the moral of the story is, don't paint your airship with rocket fuel." -- Addison Bain
  22. It's not about quantum photon absorption. by Ungrounded+Lightning · · Score: 3, Informative

    I thought this was obvious after learning about photodiodes in electronics class.

    It's not about the quantum nature of the absorption of the photon and its conversion to an excited electron state.

    It's about the efficient propagation of that excited electron state, once created, from one molecule to another until it gets to a place where it can be used. "Picking the path" in a non-random way, without losing energy in the process, seems to be using quantum weirdness as well.

    --
    Bantam Dominique roosters crow a four-note song. Once you've heard it as "Happy BIRTHday" you can't NOT hear it that way
  23. The point of the research by da+cog · · Score: 5, Informative

    As a quantum physicist, perhaps I can enlighten those of you whose ignorant "of course it's quantum physics! clearly this research is the st00p1d" comments have gained unseemly amounts of modpoints.

    Yes, of course quantum mechanics is what is ultimately responsible for everything that happens in the world (at least, as far as we know, though general relativistic phenomena are so far an exception to this). However, despite this fact, it is remarkably the case that the world we perceive on our own macroscopic level does not behave in a quantum way at all, but instead seems to obey classical mechanics. Essentially what it comes down to is that at some point, things start interacting with their environment so much that they start being constantly measured, and so the quantum behaviour disappears. What is not so clear is at exactly what level the world stops being quantum and starts being classical.

    In general, the cutoff seems to be somewhere around a molecule. That is although atoms and bonds between atoms are quantum effects, molecules tend be very well modeled using classical forces that were obtained from the quantum models of the bonds.

    Because of this, before this research was done, a very reasonable educated guess for one to have made was that the first step of photosynthesis, where an electron essentially is knocked into walking from one part of the molecule to another, would be a classical process, since it happens on the scale of a molecule. Put another way, one might have guessed that when the electron walked from one part of the molecule to another, it did so in a classical (but non-deterministic) fashion by choosing one of the paths available to it and walking down that.

    However, what this research has shown is that this is not the case. The electron in fact takes several paths at once. This was detected by performing experiments which showed that there were interference effects; this is the standard approach to take to determine whether something is quantum or classical by the following rough chain of reasoning: you can only see interference patterns when you have cancellations, and you can only see cancellations when something has taken two paths simultaneously but with the opposite phase, so ergo if you see an interference pattern then something quantum must be going on.

    This is actually very remarkable because it means that nature specifically engineered a molecule that manifests quantum behaviour on a larger scale then it usually appears. This is a non-trivial thing to have done because, again, the fact that we don't usually see quantum behaviour on this scale implies that it is typically precluded by interactions with the environment, so the fact that this molecule accomplishes this means that it somehow evolved to isolate the electrons involved in photosynthesis from their environment in order to allow them to act in a quantum fashion.

    It turns out that the gain from doing this is small, but notable; I didn't read the article, but I did talk to some of the people involved in this research at a couple of meetings and if recall correctly they said that according to their simulations, by doing this nature gained an efficiency of about 10% over what it would be able to get if it were only using classical phenomena. Thus, this effect is actually important for us to understand because it may give us insights into how we can engineer our own devices to use large-scale quantum phenomena to more efficiently harness energy from the sun.

    --
    Snarkiness is inversely proportional to wisdom because it emphasizes feeling right rather than being right.
    1. Re:The point of the research by da+cog · · Score: 2, Informative

      Fair questions. To answer your first question... I actually said something less clearly then I should have. When I said "the cutoff seems to be somewhere around a molecule", it sounded like I was saying that the cutoff was for objects that were molecules, but what I should have said was "the cutoff seems to be for phenomena that occur on a scale that is somewhere around the size of a molecule." That is, even though an electron is being involved, and an electron has the size of an infinitesimal point (as far as we know), since it is moving a distance that is on the scale of the size of a molecule, this movement would normally be a phenomena that could be described classically.

      Put another way, the quantum "fuzziness" of the electron is normally just big enough that you can't really say where it is inside of an atom, but not so big that you can't say at which atom it is currently at. However, what this experiment showed is that the size of the fuzziness of the excited electron was (in a very rough manner of speaking) actually much larger than the size of an atom and encompassed about seven atoms of the molecule (if I recall the number correctly).

      As for how you measure that the electron was really at two spots at once... I am a theorist rather than an experimentalist so unfortunately I don't have the exact tricks that they use stored in working memory (and they really do some impressive and clever things to tease out what's going on from deep within a system!), but the general idea can be illustrated by a simpler "thought experiment".

      Imagine that you are sending water waves (not big ones; think ripples) through a wall that has two slits, and then a little further along you have a second wall with a bunch of detectors. In this system, two sources of waves are being generated between the two slits in the first wall. Now pick a particular point along the wall with your detectors. If you are clever, you can pick a spot so that whenever an "up" ripple has arrived from the first slit, a "down" ripple arrives from the second slit that cancels it out so that at that point in space the water is perfectly still and flat *at all times*. This is how you can tell that there were two sources of waves, since if there were only one there would be nothing to cancel the wave out and you would see it constantly rippling everywhere along the detector.

      So suppose now that we are trying to distinguish between two different scenarios. In one case, I keep both slits open all of the time, and in the other case I repeatedly pick one slit at random and then open it just long enough for one ripple to pass through -- so in the first case each ripple ultimately passes through both slits (and is the source of "two" ripples on the other side), but in the second case it only passes through one, even though we don't know which. How could you tell these scenarios apart? By looking to see if there are points on the detector which are always perfectly flat, and other points which fluctuate, since this kind of pattern -- an "interference pattern" can *only* have come from two interfering waves.

      In the case of "particles" -- which are all fundamentally waves that just happen to come in bunches and appear at points which creates the illusion that they are a particle (long story here ;-) ) -- it really is the same idea, only with the subtlety that we can get the same effect as randomly closing one of the two slits by measuring which of the two slits the particle-wave had passed through, since this will force it to pick only one of the two slits (again, long story here). Put another way, the act of measurement forces the electron to act like a classical object and to only exist in one place instead of both at once, and so we can measure whether the electron acted like a classical object or a quantum object based on whether it created an interference pattern.

      Now, you don't actually see a ripple at your detector but instead just get a number of "counts" of how many times an electron hit your det

      --
      Snarkiness is inversely proportional to wisdom because it emphasizes feeling right rather than being right.
  24. Re:A step closer to the brain as a quantum compute by TrekkieGod · · Score: 2, Interesting

    Nothing science has put forth even attempts to explain why I have a sense of me.

    People put way too much importance on that. Your brain is telling you that you have a sense of yourself. Take some of the right drugs and suddenly you can have your brain giving you a sense that you're everyone and everything else too. Doesn't make it true.

    It's possible, and in fact likely, that what you perceive as free will and consciousness is an illusion of very complex, but completely deterministic behavior. You haven't offered anything to explain why that wouldn't be the case.

    If we manage to figure that one out, the next step would be to explain why anything exists at all.

    The question of "why does anything exist at all" is utterly meaningless. If nothing existed at all, the mystery would be "why is there only nothingness?" except there would be nobody to ask the question. The mysteries are still equivalent.

    --

    Warning: Opinions known to be heavily biased.

  25. Re:Quantum Mechanics May Be At Work? by Profane+MuthaFucka · · Score: 2, Insightful

    Most of the time it can be disregarded. Now is an appropriate time for a car analogy and discussion about how quantum effects can be ignored when designing a timing belt.

    --
    Fascism trolls keeping me up every night. When I starts a preachin', he HITS ME WITH HIS REICH!