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User: Gori

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  1. Re:Don't use Java on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    "I do this for a living at a genetics research lab"

    That they key here. We have nobody like that. So we accept a little performance loss...

  2. Re:HubZero on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    Very interesting, thank you. I will certainly look into this !

  3. Re:low performance java on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    To my pleasant surprise, many people reacted with a similar comment. Actually one of the main drivers of the whole HPC project was that we , unlike most departments having clusters, were not going to keep it for ourselves. Posts like yours just confirm what we expected, many people have more cycles that they can use, and even more need more cycles than that they have. The main obstacle is organizing the sharing...
      One idea we had is that instead of direct payment, we ask people who use it to donate a node or two to the cluster. Keeps growing and becomes a shared resource. Lets hope it works.

  4. Re:Hmm... on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    I normally don't feed trolls, but what the heck. Please check your facts on Java performance, for example : http://kano.net/javabench/data

    Plus, we have more than half a million of lines of code, which for a relatively small group like ours is huge, so we cannot "just rewrite"... And, it is a mixed platform cluster. There are/will be all sorts of machines running inside, so java makes life easy...

    It is just sad how many readers jump straight on the meme of java=slow. Sure, 10 years ago that was the case. Have you ever actually used java to do some heavy lifting ? Try 1.6 and see...

    If your code is not doing something awfully specialized like massive matrix inversions and pure floating point calculations, and you dont care about startup times ( our simulation runs are many thousand times longer that the startup) there is very little difference is speed. A massive difference in development cost though. Plus basically ALL agent based modeling platforms are written in java. I wonder why...

  5. Re:Stone Soup on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    Interesting.
    This is exactly the kind of things we had in mind. It is usually a organizational issue, not a technical one. We are thinking about charging for access by making people buy/donate new nodes, effectively making it better for everyone involved.

  6. Re:Gori, what university is this anyhow? on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    Its in Europe, the Netherlands. If you are still interested, do you have an email I can contact you at ?

  7. Re:low performance java on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    You are missing the point. Most, if not all people who work here are domain experts, not programmers. I will gladly take a 30 % performance hit, but still allow the experts to write something useful, in a realatively clean and simple language that will scale nicely. Plus, the amount of scientific libraries for java is insane. And if you are interested in performance, check out hadoop : http://hadoop.apache.org/core/, i is written in java, mind you....

  8. Re:Coolest? on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    Dude, Im not asking what research to do on this thing. I got plenty of it. But, as other people also mentioned, these kind of machines can stand idle for periods of time. Im just thinking about interesting things to do then, and not waste the downtime completely...

  9. Re:Coolest? on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    Yup, that was the exact initial idea...

  10. Re:How about you don't? on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    Look, we have PLENtY of ideas, that is not the problem. But sometimes it is good to go far out on a limb and see what selse you did not think of. And do not underestimate the power of java. Plus, I prefer to spend one extra day crunching through less optimal code , then weeks and weeks of peoples time, who cant really program that well, optimizing the same code. Plus, readability/maintainability of java code beats speed in importance any day....

  11. Re:How about you don't? on Cool/Weird Stuff To Do On a Cluster? · · Score: 4, Interesting

    Actually, we are designing a sophisticated monitoring and control system that will power down all the nodes that have nothing to do. Sustainability is *the* reason why we build models in the first place. Most of them are used to estimate CO2 emissions of different future industrial systems.. so yeas, you are right, this is an important issue...

  12. Re:Do Good in the World on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    Great idea. This is exactly in the line of whaty we were thinking. Send me a slashmail, and we can talk....

  13. Re:Java? on Cool/Weird Stuff To Do On a Cluster? · · Score: 1

    Well, no so sure, check Hadoop out : http://hadoop.apache.org/core/

    Yep, it is written in Java...

  14. Want linux games? Vote with your vallet ! on LGP To Introduce Game Copy Protection · · Score: 4, Interesting

    Everybody always whines about the lack of linux games. We all know how much effort it takes to write a game, especially a good one. Now here is a company offering something that looks fairly decent, and includes a very minimal and polite way to ensure you actually payed for it. First thing everybody says, no I will not buy it, since it requires me to prove that I bought it ?? WTF ?? Are we really surprised there are not many commercial quality games out there ?

    If you want linux games, you either make your own/help people make them, or you pay for them. It is that simple. Im buying this one when it is out of beta, just as I preferably buy hardware that has good vendor supplied OS drivers for them. Vote with your valet.

  15. Re:Um...Question? on Water Ice On Mars · · Score: 1

    http://en.wikipedia.org/wiki/Phase_diagram

    When the pressure is low, solid water will not go through liquid phase when the temperature increases. Basic thermodynamics...

    See this : http://www.cbu.edu/~mcondren/water-phase-diagram.jpg

    Choose a sufficiently low pressure, and draw a horizontal line (increase in temperature) from solid to gas...

  16. Re:I figured it out... except for... on Dutch Voting Machines De-Certified · · Score: 1

    Sure, but he is proposing that the holes are punched by machines, not by near sighted and tired old people.
    So A perfect production.

    Hot needles melting holes in thin plastic strips. Wont decompose for another 100.000 years, unless someone burns them :)

  17. Re:so bad? on Mormon Church Goes After WikiLeaks · · Score: 1

    How 'bout this : http://en.wikipedia.org/wiki/Liberalism_worldwide#Europe

    To be very rough, Liberal in Europe, especially north-western, is an economic, and often socially conservative, right of centre thing...

  18. Re:Once again... on Monster Cables Pushes Around the Wrong Small Company · · Score: 1

    ...intellectual commentary on current issues. With that little snippet, you sir have just made my day...
  19. Re:Theming XP (and Linux) for 800x480 on Microsoft Accommodating Eee With Lightweight XP · · Score: 1

    You can try PyRoom, a clone of WriteRoom. Written in, you guessed it, Python. It is GPL too, unlike WriteRoom.

    Here is the link : http://pyroom.org/
    But you really want to get it from launchpad : https://launchpad.net/pyroom

  20. Re:What about easy to write EXIM data first ?!? on Canon Files For DSLR Iris Registration Patent · · Score: 1

    All Nikon DSLRs have the setting to write a custom text to the exif comment field. for example :
    "(c) www.myname.com" is what I do. If you happen to have one, check these instructions for the D200 : http://www.kenrockwell.com/nikon/d200/users-guide/menus-setup.htm#secret They are pretty similar for all nikons.

  21. For the first time, it is waranted not to RTFA on Richard Stallman on OLPC · · Score: 1, Insightful

    Ok, the actual TFA is maybe 3 times longer that the summary. Man, how does this stuff get past the editors...

  22. Re:NoScript on Mass Hack Infects Tens of Thousands of Sites · · Score: 1

    Dude, from the FA : ...others continue to serve visitors a malicious script that tries to hijack their PCs using multiple exploits...

    and ...The sites [were] hacked by hacking robot by means of a SQL injection attack, which executes an iterative SQL loop [that] finds every normal table in the database by looking in the sysobjects table and *then appends every text column with the harmful script*...

    So yes, the parent is probably right. If you block javascript, you are not affected by the compromised server...

  23. Re:If Toshiba can offer 40 year financing.... on Toshiba Builds Ultra-Small Nuclear Reactor · · Score: 1

    Ok, any ideas what that CO2 will be doing to do when you burn up "all" the oil ? Some estimates say that there are a few orders of magnitude more fossil fuels to burn than the atmosphere (IE, human society within it) can handle...

  24. Re:Bullshit Bingo? on What If Yoda Ran IBM? · · Score: 1

    darn.. you beat me to the bullshit bingo... signal to noise ration in the TFA is rather low...

  25. Re:Sometimes on Microfluidic Chips Made With Shrinky Dinks · · Score: 2

    +4 Insightful ???