Desktop Biodetectors
IvyMike writes: "EE Times has an interesting article on the development of desktop biodetectors that could quickly detect the presence of pathogens like anthrax and smallpox. It uses some pretty cool technology to identify the target pathogen's DNA. Too bad we don't have these things today."
A machine where I put in some biomaterial and have it tell me what bacteria I have and what antibodic has traditionally been used to fight it. It'd help me decide if I need to go to the doctors or not.
Perhaps these devices already exist and or they're too expensive for the home market? Or does it all basically boil down to having to do a culture, and compare how the bateria/virus looks compared to a catalog of specimins?
Yeah, I can see it now... There's this really stinky guy here at work and the dang little device would just keep warning us to get away from him... I'm not sure if that would help or hurt productivity... Maybe we can put it in the hall and it'll warn us when he's coming around the corner!
Just because I AM paranoid doesn't mean they're NOT out to get me.
I sneeze without covering my mouth. Suddenly lights and sirens go off and the CDC quickly rushes in wearing biohazard suits.
There's an interesting chart link from the main story. Looks like it uses something to attract the anthrax DNA, and when anthrax attaches to it, it bridges two gold electrodes, thus closing a circuit and showing positive. Neat!
It seems the this could the be the start of the canary and the mine idea.
It would seem most logical that if these biodetectors have enormous costs then the real decision is not whether to use them but where to use them.
If we had controlled ports on entry, that would be one place but proabaly not very wise given how open the US really is.
The other idea is first install them in major hospitals or have a roving CDC action team that would have these biodetectors (which they probably all ready have).
From the article, there main concern seemed to be cost, but in the light of certain events I think big business may see the benefits do out wiegh the costs
Thanks for reading
Sigs are dangerous coy things
We already have overloaded emergency response teams all over the country with anthrax fears every time we see a white powder.
Now, we'll overload them with automatic notifications from desktop detectors that are miscalibrated, malfunctioning, or 0wned.
Good idea.
Goat sex free since 2001
I've got some leftovers in there that are really borderline.
"Mr. President, we cannot allow a Desktop Biodetector gap!"
"Sir, the bioalarm just went off in the boss' office! We need to get a hazmat team up there right away!"
"Relax, rookie. Look at the DNA profile. Those are gametes. Billions of 'em. Nothing a few paper towels can't clean up."
"But, sir... they don't match the boss' DNA."
"...well, whaddaya know. Looks like we have a big raise coming, rookie."
I looked into the abyss, and the abyss looked into me--and we both winked.
OK, sure, they're cool gadgets, but saying that is like saying "Too bad we don't have gadgets on the desktop to detect incoming meteors."
What are there now, somthing like under 30 cases of Anthrax so far? Sent to a few high-profile companies? Sure, that's a MASSIVE INCREASE over previous levels, but statistically you're still in pretty good shape. Don't let the media hype get you worked up.
Too bad we don't have detectors on our faucets just in case the level of mercury rises rapidly...
Take a look at the 11/01 issue of Wired Magazine on page 76. Not exactly inexpensive or desktop, but getting close.
Even though the "DNA profiling" concern is often a standard part of this science, this kind of technology seems like it might underline that concern. A "consumer level analyzer" could give bigots and xenophobes an easy way to test and target a particular group.
Just a thought...
Guvegrra?
So, you think Windows will be able to detect a virus? Riiiiiiggghttt....
Soko
"Depression is merely anger without enthusiasm." - Anonymous
Could these be used to detect an individual person?
I'm getting a lot of Invalid form key errors: Invalid form key: CuhZiMm1UB !
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Bush's education improvements were
What a ridiculous idea. What with people stocking up on gas masks these days, we don't need them clamoring for "desktop biodetectors" that will never prove useful for more than 0.0001% of the population. Way to add to the paranoia, /.
-Ryan, with the unoriginal sig
'Captain, I am reading no signs of Anthrax on the surface'
tee hee!!
Wroot
so you cruise into work on monday morning after a weekend of minor recreational use, sitting at your keyboard, next thing security is escorting you out of the building to the waiting police, as the little bio-detector has picked up the results of your weekend...
Still it saves you the hassle of producing a urine sample I guess.
The economist is running an article about a anthrax detector at http://www.economist.com/science/displayStory.cfm? Story_ID=821937.
"A better solution would be to screen on the spot. And technology to do this is now available. It uses a test strip, costing $20, that looks like a pregnancy-detection kit."
May be useful it you (or your employer) regularly do(es) things to piss people off so much that they'd want to kill you....
It uses some pretty cool technology to identify the target pathogen's DNA
But what about nonbiologic things? Poisons for example. I didn't read anything about that, how can they be detected?
If God gave us curiosity
Can you see the reports to management?
EMPLOYEE: JONES, PAUL
Biohazards: Clean
Infectious Diseases: Clean
Genetic anomolies: Clean
Pharmacopia: Found -
** ASPIRIN - Trace Amounts
==================
Report submitted to Human Resources for individual factors improvements...
These reports, while "sold" as providing the ability to detect hazardous materials could in fact be used in a manner similar to the Gattica theory: testing for genetic predispositions or even medications (say, the AIDS cocktail) to determine whether you should get that promotion or not. Really, from the business end--you've got rounds of layoffs, shouldn't you have the best information when selecting who goes and who stays?
:|
---- Please be nice in case my Slashdot karma ~= my real life karma.
The best thing about such a device is that it could justify its cost.
.035%
A $500 "detect Anthrax" device wouldn't yield much value for a large portion of the population. But... a $500 device that could detect and identify a wide variety of microorganisms might be very useful -- and worthwhile -- indeed.
Maybe it'd be like running "top" -- instead of giving you information about processes taking up system resources, you could get information about microorganism activity in the environment (or your body, given an appropriate sample...).
ID NAME EST COUNT/CU CENT % OF TOTAL
787 Staphlo 2324572 12.2%
8901 Antrax 253334 1.3%
143 E. Coli 289217 1.4%
1589 Ebola 16333
Libertarianism is rich wolves and poor sheep playing gambler's ruin for dinner.
What? Why do we need desktop biodetectors? I thought Anthrax was just being distributed in the mail! Not the e-mail! Nooooo! I haven't been handling my keyboard with biomedical gloves!
would be nice
I really can't see these things ever being useful in a normal office context.
Sure, a handheld tricorder-like device would be really good for military situations, labs or post offices (sit one over the line), even-more-so if it could be extended to other pathogens.
However, it seems like another non-product who's market rides on peoples current paranoia. Unfortunately in this case, the terror will hopefully be over way before this is even a prototype!
-- Mike
Like detecting human DNA.
Perhaps not with current technology, though this is of course the first step... Let us hope that people can collectively take notice of Gattaca-esque warnings.
They won't of course, though hopefully I'll not be around to see it.
...detect the presence of pathogens like anthrax and smallpox.
Anthrax and smallpox are diseases, not pathogens. The pathogens causing those diseases are Bacillus anthracis and Variola major/minor.
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That said, this is really cool technology. It's potentially much faster than the standard tests today, either polymerase chain reaction (PCR) or spore cultures (which is the *only* way to 100% reliably test for anthrax but is also the most time consuming protocol). Aside from testing for microbial agents, it sounds like the technology may have applications in high-throughput gene analysis.
NO CARRIER
The detector is not detecting the organism, it is detecting its DNA. The basic idea is as follows: suppose you have a nasal swab that you suspect has anthrax in it. You extract DNA from the swab, and chemically tag the DNA with gold. In your detector, you have a piece of cloned anthrax DNA that consists of sequence unique to Bacillus anthracis, also chemically tagged with gold. The cloned DNA in the detector can be thought of as half of a capacitor; without the other half, current cannot flow and thus you have strong resistance. If there is anthrax DNA in the swab sample, it hybridizes to the detector DNA via Watson-Crick base-pairing. Because this hybridization is DNA sequence-dependent, only DNAs with identical sequences will hybridize to each other (this is an oversimplification but suffices for this discussion). When the gold-tagged sample DNA binds to the detector DNA, this completes a circuit and resistance drops dramatically. On the other hand, if no anthrax DNA is present in your nasal swab sample, then nothing hybridizes to the detector, and no current flows through the circuit. Even if there is DNA from other bacterial and/or viral species, there won't be anthrax-specific sequences and therefore those DNAs will not hybridize to the detector.
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The current issue of IEEE Spectrum has a one of its big articles on Biological Warfare Detectors. The article is available at http://www.spectrum.ieee.org/WEBONLY/publicfeature /oct01/bio.html.
A little ironic that they put together this article before September 11th.
I saw a new detector on the news the other day. It uses cells from frog embryos to do the detecting. The cells are between glass slides and are connected to wires.
The thing supposedly could detect not only all know chem/bio weapons, but unknown poisons as well. The cells react to substances just like people.
If you ever take a lab course in microbiology, one of the more unmistakable aspects of the science is that different cultures reek with their own specific odors.One celled critters can't usually pick themselves up & move to to a new colony when their milieu becomes toxic thus they have to transmute poisons in their culture into either a precipitate or volatile compound that will evaporate. I call this the SPQR effect((c)1975 SPQR).
By collecting a volume of air for instance from a room full of people, if one of those individuals is culturing a biological on their skin or in their blood, the air sample ought to contain specific volatiles for all the biologicals growing on the individuals in the room[this would include volatiles specific to various conditions of the individuals in the room also.(anger, diahrea, osteoclastic activity,etc)]
By removing inconsequential materials from trhe air sample such as Oxygen, water, CO2, etc a frozen sample of volatiles is available to be gasified & passed thru a gas spectrometer to search for *specific volatiles* that are indicative of one of the tested individual hosting a bacteria or perhaps a virus.
A simple desktop device could easily perform these tasks & evaluate the condition of single or group subjects. By collecting a library ofspectrums for the *average individual* a central spectrum would be obtained called a SPQR spectrum ((c) 1975 SPQR which could be used in detecting the flora & fauna & metabolic condition of an individual.
A cheaper technique for for detecting anthrax spore in the air is based upon the clay dating yechnique which came out a few years ago. By collecting a sample of the dust in the air & placing it in a chamber, raise the temperature until the cell coat ignites, just as paper ignites at 451 farhenheit their are specific ignition points of the spores materials which would be detected as infra red flashes in the chamber. The anthrax spore has specific side chains that protect it from destructive engulfment by macrophages [white blood cells].
Devices in the wild detecting DNA?
How long before the gene screener is applied to human DNA? After all, you'd want to detect all those threats from people with "criminal" genes too...
If something like this were to ever be deployed, how long before people start mailing polymorphic-self-mutatating-stealth-viruses, applying computer virus technology to bio weapons??
I think the idea that a desktop detector can stop this kinda of terror attack is naive. Why not just vaccinate everyone who could be in a position of risk?? Surely a lot cheaper....
I can see it now... Damn, I got infected with Anthrax 9b, duh, you forgot to apply those bio-security patches in time....
lol!
You forgot that Anthrax isn't communicable (human-to-human) most of the time. I think the white supremacist group that is sending these letters will run out of Anthrax soon, and everything will be fine once again.
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"What is the sound of one belly slapping?"
President Bush expressed disappointment today when he was informed by scientists that the pathogens responsible for Anthrax and Smallpox are naturally occuring. According to the panel of scientists, Anthrax spores occur naturally in all parts of the United States and are likely to appear in random nasal samples. Many of the positive samples taken in recent weeks are most likely not a result of bioterrorist acts, according to Dr. DeSelby. DeSelby said, "Thousands of viable Anthrax spores must be present in the mucous membranes in order to cause Anthrax. A compromised immune system--a frequent side effect of the typical American diet--helps the infection to take place with even fewer spores."
Bush dismissed the statements as "pro-Taliban propaganda". He added "You're either for us or against us, and I think the scientists are against us." Later in the day, he ordered bombers to Germany, stating "a lot of scientists came here from there", apparently a reference to the so-called "Brain Drain" resulting from Hitler's rise to power last Century.
Just 'cause he set up some graphics (with no written material, titles, or footnotes, bibliographies, etc) doesn't mean he knows what he's talking about. As a matter of fact the spore coat of a B.Anthracis spore is highly resistive.
It's often said around here that "he who trades a little security for a little freedom will lose both and deserve neither".
And from casual observations we can say that security definately is a race where the final destination is never reached.
The same thing applies to these devices, IMHO. Just another gadget to keep care of (the batteries running, the possible filters changes or chemical refills done, etc.) And most technical systems can easily be tricked - with a new strain of Anthrax, with some harmless agent that frequently causes false alarms, rendering the box worthless.
If this baby really cuts cheese, somebody with a strong determination will find other ways to strike.
+++ath0