Scientists No Longer Sharing Information?
chill writes: "A little while back there was an item here on Slashdot about the debate over public funded research and whether or not it should be required to be "open". Well, here is some ammunition to one side of the debate. It seem there is an article in the Chicago Tribune about the increasing unwillingness of genetic researchers to share supporting information with colleagues. The study is from the Journal of the American Medical Association for those who want more than the second-hand summary of the Trib."
well, if you look at the last decade in Genetic research, Scientists are allowed to patent the genes that they dicover.......this has lead to the unwillingness to share since sharing would cost them the potential money that can be made with the gene........I have always said that Patents on genes was a bad disision.......at the turn of the 20th century, scientists tried to patent Elements on the periodic table......the were not allowed because they belonged to everyone.....well, how is that logic diffrent for Genes?
I am the Alpha and the Omega-3
I remember vaguely that Einstein once mentioned the probability of two scientists coming to the same conclusion at different places, trying to rule out the possibility of copying one another's work. Knowing this, wouldn't it suck if my tax dollars were going to two research agencies keeping secrets and wasting double the money finding the same thing? Bleh.
From the article:
Forty-seven percent of the academic geneticists who asked other colleagues for information, data and materials related to published research were turned down...
Coincidentally, a vast percentage improvement over their collective attempts at dating.
Hmmm...most everybody agrees that information should be open, but then again, some of our biggest advancements have come from scientists working in secrecy (example: atom bomb, the space program). I dunno if this is such a bad thing. Competition seems to keep people motivated.
The World is Yours.
Greed. That's all there is to it. All those biotech IPOs tell us that genetics research could be highly lucrative. When money enters into the equation, scientists are often driven more by profits than the good they could be doing for mankind.
And that's what's happening here. There's very little difference between proprietary software and "closed-source" science. Both put profits before progress.
Learn to Play Go
The reason the patent system was established in the first place was to encourage sharing of information. What company is going to disclose the technical content of the products they sell unless there is something like a patent to protect the compotetitve edge they have won through their technology?
I like how slashdot is linked...
I know the humane genome project has been plagued by this since the start. The various companies working on it are very hesitant to release information to their competitors, as pharmeceutical companies could make literally billions of $$ with some of the discoveries that have been made.
This lack of sharing for sure has been detrimental to the progress of this research, but without the motivation of potential proft, I'm sure there would be even fewer people working on it. Let's face it, it would be great if everyone worked on things like this "to make the world a better place," but most of the financial backers are doing it "to make a crap load of money."
The future isn't what it used to be.
I really do not hope science as a whole will share the same faith as a lot of software development has. Support free software before it's too late.
The article doesn't go into the main benefits of sharing generally and freely in programs and studies. Protectionism, if not kept in check, can eventually lead even to people within the same department not sharing information.
This is not surprising given today's scientists
are required to publish their work or perish. And let's be clear, only novel work gets into the good journals. Why help fellow scientists stab you in the back?
Dee N. Aiee
With so much tension going on right now in the world and the whole situation after 9/11, personally, I believe that any vital information related to science and other fields of development should be kept confidential and internal.
When Clinton was in office, look what happened (i'm a Republican). First off the whole Sandia National Laboratories scandal with the scientist from China who stole information on nuclear development (please keep in mind, my facts are probably wrong because this happened a while back and I haven't got a chance to research on it), but not even that. Clinton sold China a bunch of our layouts for modernized weaponry, aircraft, etc.. probably due to the fact that China gave the Clinton Administration a hearty donation.
The fact is, in general and it's the truth, if you find or discover something that no one ever has found or discovered, be smart and don't share it with anyone. As greedy as I might sound, it's a fact, it's reality. It's like finding a great idea for a business that nobody has right now. Are you going to go telling the whole world you found this great idea? Absolutely not.
Therefore, I think it's best that for now, any new developments should be kept confidential rather than sharing this with colleagues, and especially colleagues from other countries.
"The ones who dont do anything are always the ones who try to pull you down" -- Henry Rollins
At many of the top research universities in America (such as MIT, Caltech, UM Rolla, and NJIT), I have seen from personal experience that this is not the case. The spirit of academic cooperation and mutual assistance is alive an well.
Any breathing female would certainly be able to find countless opportunities to recieve "genetic information" on any of these campuses.
----------
I am an expert in electricity. My father held the chair of applied electricity at the state prision.
This is a process that has been going on for quite
some time. Since you can't publish before patenting, this is the way things are.
The notable exception to the rule has been math.
Math departments have been known for their openness, since math discoverys can't be patented.
Or can they? Since many mathematical topics can
be applied as software algorithms, software patents now threaten Math as well.
Software patents need to be stopped, and I think many people agree that the entire patent/copyright/IP thing needs reinventing.
Nobody in their right mind puts the "good of mankind" over money. Tell me, when was the last time you paid extra for an electric car, installed solar panels on your roof, or donated money to starving Ethopians. Greed is human nature. We've progressed just fine over the past hundred thousand years thanks to greed. That's not about to change anytime soon.
The World is Yours.
If scientists get a dime of my tax money they damn well better publish it!
One of the original goals of science was the pursuit for the truth, and to these ends scientists shared information freely, with the belief that no matter who made the breakthrough discovery, everyone could and would benefit... it was THE ultimate open source as so many people have pointed out.
Now with all the rampant patenting and profiteering going on, it's no longer about knowledge for the good of humanity but cold hard profits. Even scientists who normally share information may feel pressured to patent or keep secret their discoveries, if only to prevent someone else from depriving them of it.
Thankfully, most scientists in the fields of "pure science" haven't really been affected by this. But scientists working in fields in which profits can be made (biotech, computer science...etc) will likely find their research threatened.
-- Your local friendly mad scientist-in-training
I can't share my opinion on genetic research data with you right now. I'm writing a business plan.
IANAL, but imagine a beowulf cluster of in Soviet Russia all your belong are base to us welcoming the new SCO overlords.
Does this mean that they may secretly have the abilities to create dinosaurs?
No one would share that information, just ask InGen...
Isn't secrecy the Achilles heel of all mad scientists? We need merely look at many notable cinematic cases to realize that their secrecy inevitably leads to their corpses being ravaged by man-insect-ape hybrid monsters. Furthermore, to make the depressing downright suicide-inducing, we, the innocent citizens of this world, are forced to endure the heroic chicanery of Brad-Pitt-like stereotypes.
We must put an end to this for the sake of the people. Say no to Brad Pitt.
Pax Digitalia
of the growing individualistic (some might say narsasistic) nature of western culture, a side effect of the great corporate fudalist state that we have become, or possibly a combination of both, with each supporting the other?
I have to pay royalties for every amino acid that gets synthesized by said Gene?
I suppose the people who patented the Lac Operon could just tax milk, couldn't they?
*sigh*
Karma: Non-Heinous
TissueSoft has just released Genome XP that will allow its customers to improve their genetic makeup by subscribing to ithis new service for a reasonable $666 a year. Genome XP features copy-protection to thwart unauthorised release of genetic material... any release of genetic material without purchase of an additional license will stop the user's heart until another license is purchased. In the advent of unintentional release of genetic material, users can have their heart restarted after a call to the TissueSoft license center (open weekdays 10am-3pm EST).
There are 10 types of people in this world, those who can count in binary and those who can't.
This isn't a new thing. Throughout history, scientists have shielded their results. Some have done worse things like releasing misleading information to throw off their competitors. This same type of stuff filled the dialogues of ancient history. Alchemists in the middle ages used cryptography to hide their secrets. Leonardo da Vinci wrote backwards, etc.
Of course, being too secret means you never get public acknowledgement. The people who get stuff before the public get the credit, shift the paradigms and all that fun being famous stuff.
The sciences wax and wane between secrecy and publicity seeking. Regardless, the science of the next generation will be built on the stuff that goes public.
As for the debate. I believe it is important that scientists are able to control how they release information. You don't want to have to put everything before the public, because most of it is dead ends.
Isn't it so 60-s? Wonder who will be the first this time...
What we have here is a a type of market failure. This does not mean that free markets have failed, but rather that the present market equillibrium is at a situation that is less than optimal for society, a situation that John Maynard Keynes addressed in his General Theory of Economics".
Keep in mind that classical economics assumes perfect information flow for its theories to hold. A situation like this, where academic career concerns and complexity of data interferes with the free flow of information is a clear situation for the government to step in and free up the market, as it is trying to do with the Microsoft monopoly.
Some sort of federally-funded central information clearing-house, where research information could be purchased by the government and put into a freely-accessible database, would be a good first step.
I'm running a database of histopathology images derived from experimental manipulation of the mouse genome at Cambridge University and it's funded by the EU.
We are publishing all our images and data freely and people seem to be happily using our data, but while we encourage them to share their images, we made the experience that it just doesn't happen. Hardly anyone seems to want to give anything back to the community!
It's quite sad, because the more people would share their information, the more useful the database would be for everyone...
We'll probably have to hire some people now to scan and upload some images.
MG
I'm always one that disproved and disapproved of statistics in general when it comes to drawing societal conclusions.
Reading the data of the survey performed and then reading the ChicTrib article, I'm suprised moneymaking was brought up as an issue. Since, a good breakdown of why information is denied didn't show any indication that money was a factor:
- "80% reported that it required too much effort to produce the materials or information" - This is so true. Having done chemistry and biology research with joint teams in Germany, it is hard to disseminate and gather info for specific inqueries. Especially with alot more folks asking about research being done in this area. It would have been good to do a trend analysis on how many requests for specific research come in on different areas of science... chemical, physics, quantum... vs genetics
- "64%, that they were protecting the ability of a graduate student, postdoctoral fellow, or junior faculty member to publish" - This again is so very true. If you release some info regarding your current research and give it to another group, and they publish material first, you just lost your chance to fulfill your thesis project. You can't do something original in a thesis that has already been done. Can't blame them for denying requests.
- "53%, that they were protecting their own ability to publish" - This is probably the most "iffy" reason. When it comes to publishing papers, if you use one glob of info from another team that you didn't do yourself, that is one more person to include in on the contributing authors. Alot of scientists want to minimize their involvement with other projects, to eliminate backlash, being held back by wrong data, or confirmation of results in data.
Also, the ChicTrib article makes a gross quotation in leaving out that 47% of geneticists only had at least 1 request denied in the past 3 years. And this was just in regards to published research vs. ongoing. The article makes it seem that scientists aren't sharing any info at all, which is just bad news.
All in all, shame on Mr Peter Gorner for a horriably twisted article, grossly manipulating the facts, then considering is an academia "science" article in ChicTrib.
The stats from JAMA clearly refer to published research needing scientist to relinguish info, so other scientists can refute, rebut, and challenge the validity of a complex and controversial area.
I suppose their attitude might be "well, given that the alternative is not hearing about this research at all we'll let it through", but, given that in most academic environments publishing papers is the key to a successful career, and that competition to get papers into prestigious journals is high, reviewers for those journals should be able to "encourage" complete publication.
I'm currently preparing my first academic paper (a simulation study of a couple of new algorithms we devised), and I know I'm being very careful to explain how our algorithms and simulation environmental worked such as to make it possible to reproduce our results. If I don't, my supervisor wouldn't let me submit it.
Any sufficiently advanced technology is indistinguishable from a rigged demo
--Andy Finkel (J. Klass?)
Two key words here: PUBLIC and PRIVATE. If its funded by some random private agency, then fine, they paid for it, its theirs.
HOWEVER, if it's publicly funded research, the results should be public. If I pay for it to be done, I want it.
Anyone know how the freedom of information act would apply here?
I betcha its more the case of
"I don't want to share stuff with rival schools that will just patent this and invalidate my work" more than "I'm elite!".
Look at other fields like math/crypto/Comp sci/etc... They're fairly open and they share their stuff. That's because crypto research is not patentable as profitably [name 10 people who like RC6 for instance...]
Tom
Someday, I'll have a real sig.
Having done meta-analytic research and genomic research as well, I can tell you this scares the hell out of me, but is also something that isn't limited to genetics at all.
There are rampant problems with private corporate interests having too much influence over the scientific process. I have written numerous legislators about this and it drives me crazy. All these current societal problems--with IP, patent law, and scientific corruption--intersect in bioinformatics and genomics to a horrific extent. It's discouraging enough and makes me sad enough that I've felt like abandoning the field altogether, against my interests (I haven't though).
However, scientific sharing of information isn't as widespread as it sometimes is made out to be, and is lacking in a number of fields (like psychology, which I happen to be a part of). The simple explanation behind the findings--supported by the link--is that people are usually just too lazy, busy, or scared by belligerent critics to give information out to others. I ask for information for meta-analyses all the time, and usually only get replies about 50% of the time. Even when I do, I know the person somewhat, know someone who knows them, or have some sort of institutional affiliation with them (i.e., have the same graduate school alma mater).
Although corporitization is a problem, it's simply not necessary to explain lack of sharing of scientific information. The real causes, although equally disturbing and frustrating, are probably far more mundane.
I guess the really scary thing is that corporatization might make these problems worse than they are.
I've said this before but it bears repeating.
The reason for not sharing information is obvious: under our economic system, the only source of income for almost everybody is individual labor. Scientific research is a very labor intensive activity and nobody is going to give their work away for nothing. Sure some scientists may share knowledge with others in the hope of winning a Nobel prize and make a name for themselves but that is a long shot.
Intellectual property laws exist only because we have a slavery system. Our livelihood depends on working for others so we can pay our taxes. The reason that we have to work for others is that 99% of people have been deprived of an inheritance in the wealth of the land. Income property is owned by a few and the state. The others are slaves. Artists, programmers and scientists depend on their work to make a living. Can we blame them? We all depend on our labor because we are all slaves. So now we are swimming in a ocean of laws and rules that take away our remaining liberties, one by one. And we are becoming more and more selfish.
But let's face it, if you cannot put a fence around it or put chains on it, it does not belong to you. Makes no difference whether it is ideas, writings, software, music or what have you. Once you've released it, like the air, it belongs to nobody and everybody. Scientists know that as soon as they reveal their secrets by sharing or even patenting them, there is nothing they can do to prevent other people from taking advantage of their labor. IP laws only serve to promote hateful competition and selfishness in a world that is becoming increasingly violent.
The internet and other communication technologies (e.g., file sharing systems) are the first major kinks in the armor of a sick system. As technology progresses, the system will eventually collapse. What will happen to a slave-based economy when robots and advanced artificial intelligences replace everybody, i. e., when human labor, knowledge and expertise become worthless?
And don't think for a minute this won't happen in your lifetime. The internet is the latest giant leap in human communication. Before that came mass telecommunication technologies and before that was the movable press. If history is any indication, we can expect a giant leap in technological progress and scientific knowledge. In fact, it is happening before our very eyes.
We should all demand a system where everybody is guaranteed income property, a piece of the pie, an estate if you will. There is plenty for everybody.
Communism confiscates all property and enslaves everybody. Capitalism gives property to a few and enslaves the rest. It's sad. The land has existed for billions of years before the first human beings appeared on the earth. Nobody has any legitimate ownership claim on the land. It should not be divided for a price. It should be an inheritance for us and our children and their children. It's the only way to guarantee freedom and a truly free market in a world where human labor is about to go the way of the dinosaurs.
Demand liberty! Nothing less.
-----
If these scientists got the millions of dollars, the respect (albeit worthless) of anyone who reads People Magazine and the top quality pussy (or whatever they may prefer) that Hollywood celebrities and Pop singers get for sharing their ideas and discoveries, the cooperative spirit in the scientific community would expand faster than Britney Spears' breasts after another few upgrades.
per se.. It's really the greediness and selfish of the companies said scientiests/researchers work for that are the ones not promoting the sharing. Just as in the computer industry there are probably NDA's that need to be signed etc. It's always been like this in the scientific industry except for the fact that scientists had alot more platforms to share their research and did so, simply to better science. Those scientists are either retired or for the most part teaching from my own deduction. The new upcoming breed don't seem to follow what was common practice from the 30's-70's.. Also when scientists DO get access to facilities that allow them to research (invite people etc, the whole 9 yds) there are alot of University lawyers and industry lawyers that prevent who gets invited and who actually hears about it. The amount of scientists sharing information has really changed, I blame it on lawyers.
There's too much money to potentially be made with some genetic data and the associated research, so people try to guard it. Physicists still share a lot of their research -- witness this e-Print archive, which has a lot of preprints/reprints, mainly in physics, but they're adding other fields such as CS and math.
Their stats show about 2500 article submissions per month lately (it's been increasing pretty much linearly for the past 10.5 years, although I suspect that uploading a revised version also counts as a "submission" in that graph), and about 150,000 connections per day. It's been around for more than 10 years, and is still going strong. It's a great resource; I wish my particular field had something equivalent.
If you patent something, then you are by definition sharing it. Patents are public, for all to see
autopr0n is like, down and stuff.
Simple. Who needs knowledge when you could have money?
autopr0n is like, down and stuff.
You had a good try at your troll. It was rational and never became absurd, which is where a lot of trolls lose it. You should add another three paragraphs, and maybe kick up the anti-clinton rhetoric a notch. Can't have too much bait. Finally, add some links to Newsmax or Drudgereport that back up your statements and you'll have people falling all over themselves trying to refute you.
Cheshire
I have had to witness the rapid, (indeed reckless) transition of the field from a public forum into a private industry. The majority of bench geneticists now, sadly, work for private firms making money off of techniques that were developed with public money. No money ( and precious little data) flows back from the private to the open public sector. As a result, Public, open Science dies. At the major Universities where I have worked, many of the scientists have had to shut down research due to lack of funding, and are not being replaced. Now there are long open stretches of hallway, consisting of empty labs and labs converted into storage rooms or ad-hoc conference rooms. Yet few of the biotech firms responsible for the diminishment of academic science realize that they are sawing off the branch on which they sit. A corporation simply can't openly perform Peer review, for fear of giving away corporate secrets. And without Peer review, Scientific endeavor ceases to be science at all, but becomes R+D as you would find in any corporation. the nearest analogy i can find is that of Alchemy. In the beginning of the renaissance, philosphers began to realize that on could manipulate the porties of substances. Rather than sharing their data with each other, and focus on the understanding of matter, they instead chose to individually pursue research dedicated to pure commercial value (i.e. the synthesis of gold). 600 years of tinkering with mercury and sulfur proved fruitless. It took only 150 years of peer reviewed work, aimed at nothing but pure scientific understanding, to understand the true principles of chemistry (and the fact that gold cant be made by chemical processes).
from the growing trend of
Commercialization uber alles.
The irony is that anything that impedes the open
sharing of info slows the advancement of scientific knowledge.
Good thing the patent system or more accurately
it's current perverse incarnation wasn't
around at the start of human civilazation.
We would all still be in caves.
... given the fact that molecular biology is becoming capital intensive (look at the multi-million dollar synchrotrons, protein-chips, sequencers, etc) the public system just cannot fund everyone. The acceptance of private funding means constraints as companies are not in the charity business. If you look at the impact of the medical system, you'd notice similar structural shifts as GPs are merged into medical centres clustered around MRI/X-ray/capital machines. A similar activity is happening in academia with greater infrastructure forcing consolidation into smaller clusters (e.g. take a look at the San Diego biotech cluster). The explanation is simple, better equipment equals higher throughput and thus productivity. Given that bioscience is basically a search through a multi-dimensional space of all combinations of proteins, you can see why the group that covers more area has a greater probably of discovering something interesting.
... even industry recognise that they cannot delay publications more than a certain amount (6-9 months??). Hence the excuse that they are preserving the publication track record of their apprentices is a bit of a cop-out. Basically they are saying yes but wait x months for some underling to publish. The problem comes in the rush to produce results, people ignore the fact that they have to be *reproduceable* results (otherwise by definition is it not science). There have been stories of groups losing original material so the only claim to fame is by squinting at a graph and hoping that the parameters they choose for their analytical process (trust me ... any mathematical analysis has zillions of twiddle factors) are not a fluke.
On the other hand, public science has the implicit assumption of peer-review
So either we go back to the slow but certain government funded research or accept that private incentives will create only temporary information asymmetry. The private market for knowledge is rather unformed at the moment as there are no clear guidelines as to what are acceptable practicese.
LL
If my taxes pay for science, I should be entitled to the results of the research, and if the scientists won't disclose it, they should be forced to hand back all public money that went into their research and all the research they used in making their discoveries.
That's disgusting! Stop playing with your food!
I have one thing to say. Distributed.net
We're always hearing about scientific and medical advancements (or attempts at) by individual researchers or small teams. What if all these players cooperated instead of trying to individually be the best.
Distributed.net has the right idea. Instead of a few groups/schools/companies trying to work out a project, make 100,000 scientists work on it.
Too bad it will never be that simple. Everyone wants to be the greedy winner of whatever prize, not a winning participant.
Here's a clue, gang: Science costs money and takes time. As a result, Univerities, private companies, and even our government have a vested interest in the fruit that research tends to yeild. The whole point of science is to obtain your results and THEN share it with the scientific community, not the other way around. Its not like Oppenheimer was supposed to ring up Hitler from the basement of UC's football stadium and tell him "Hey, I gotsa l33t c0n+rOL3d fi$$1on c#@MBeR down here man!!! Ch3k it 0ut! B00y@h!!"
Get real. Open source is not applicable to science, never was, never will be.
Bowie J. Poag
"Many scientists won't share research data, study finds." I don't understand why terms have to be redefined like this. Just because a researcher uses the scientific method to get results, it dosen't make them a scientist. It sould be, "Many employees perfoming cutting edge research for commercial interests won't share research data, study finds." Gee, what a revelation.
I wasn't a molecular biologist, but I did some work on bioinformatics and the human genome back in 1991-1993. I also got to experience the entire life cycle of a scientific research institute, from before its birth to its death (the Supercomputer Computations Research Institute at FSU.
The 1980's and early 1990's were pretty good. We did a lot of good work and released all of it, gratis. Then a couple of years after the turn of the decade, everything started to go to hell, and funding dried up. This is not to mean that there was a lot of funding in the first place. Academia has always been a life of genteel poverty. When I left academia and went into industry, they started paying me at more than double the amount that I had to work myself up to for 13 years in academia. But there are satisfactions to the purity of unclassified, public research that many people in days of yore considered to make up for the lack.
All the administrators started to talk in basso profundo tones about how research in the future was going to be like Business to succeed. Of course, none of them were actually interested in doing any of the things that business did to succeed. They just wanted it to be more, sorta, kinda, you know, businesslike. So they quite predictably floundered around for a little while, and everything fell apart. There is still public research being done, but way less of it, and actual businesses who knew how to run businesses took over.
Part of the trouble is that all those clowns who say "if I pay a dime for it, I want it" aren't willing to pay any more than a dime, and you'd better believe they're going to stick their tongues straight down the cracks of any politicians who promise to drop it to a nickle or a penny. They still want it, though, because, By God It's Their Tax Pennies!
Of course, they always have a justification for that, like Look How Much I'm Paying in Taxes, or Maybe Universities Would Get More Money If They Didn't Have Football and Taught Better. None of the justifications will pay the piper.
For this same reason, several scientific journals require that researchers agree to make their materials (strains, clones, etc) available to all.
If you break that (written) promise you won't be publishing in that journal again. I wonder if any publically-funded grants have such a clause? (share or no more tax dollars for you!)
In labs I have worked in, it was considered an honor to receive such requests for the products of your research. And there was always the constant dread of being scooped by the competition...
Competition is a good thing.
If I were back in grad school again, I would focus exclusively on developing commercially viable or militarily useful things, and avoid publishing the details. Because:
- the only person the publications benefit are the faculty member who will take credit for your research, not you, the grad student or postdoc that actually did the research.
- the only people conference proceedings benefit are your competitors--theft is simplyrampant.
- if what you share is a fact that's at variance with prior or in-press publications of powerful faculty academics, your work will get stomped on for political reasons, no matter how valid the facts you report are (remember what David Baltimore did to Margot O'Toole when her research discredited his?)
99% of what goes on in universities is just a bunch of political games, and has nothing to do with discovering or establishing anything resembling the truth. So why bother?Looks like the faculty members are tired of watching their students do this, and are trying it on themselves -- after being content with merely raping their students' ideas and research for so many decades, they've suddenly realized that there are bigger fish to fry than fat government grants (that the administration takes more than half of anyway).
"Big, Big Science. Every man, every man for himself." -- Laurie Anderson
scientists not sharing information does not surprise me in the least. now a days, a scientist could sell his information or something he found out to a company who would use it for profit. why give the inside edge to your "compedetor" so to speak?
I didn't think it was physically possible, but this both sucks and blows - Bart Simpson
...however, I will not share it until you sign my NDA and licensing agreement.
This reminds me a dialogue from Asimov's (AFAIK) Robot series, where scientific improvement in space collonies come to a halt because people live too long. They prefer keeping the knowledge secret since they have enough time to research+test+conclude and acquire fame.
Imagine a life, say, 300 years long. You have enough time to write your own KDE, eh? Horrifying.
And I forgot to mention one thing: The public would also pay a "beer fee" to cover the cost of beer consumed by the scientists and their partners/employees/whatever during the research.
Tools like then internet will always help keep the flow of information going. If genetic researchers start restricting information (for financial reasons, most likely), this is no different from software companies restricting their flow of information (source code). I have no problem with either. People have the freedom using the global communication tool of the internet, to do "alternative" projects that accomplish the same.
(Although I have a bit more of a problem with it in the case of genetic research, which more directly impacts humankind; on the other hand, it impacts mainly the well-developed and financially affluent nations, which can afford to apply genetic results. Third world nations would benefit more from a better supply of penicillin than genetic research; so in the global scheme of things, genetic researchers holding back information doesn't make a big difference to the world. Even if a cure for cancer was found, I would guess that *far* fewer people die from cancer than more basic things, world-wide. Most of the world's population doesn't live long enough to develop cancer, and other more subtle diseases for which genetic research would make a major difference.)
Of course, all of the above is subject to me not being fully informed on the subject, which I'm most certainly not. Regardless it's an interesting discussion.
-me
Love many, trust a few, do harm to none.
As I recall, Levi Strauss was actually the first to patent jeans....
A recent study from Harvard Business School found that smaller bioscience companies (the truly innovative ones) were not patenting research results, but rather keeping them as trade secrets. Patenting works for large companies that can afford to defend the patents and have enough to exchange rights with other big companies. So the science will never enter the public domain.
It's time to repeal the laws that encourage universities to take public money for research and then privatize the results for the profits of these big companies. And it's time to reform this crazy system of "intellectual property" law that is destroying science and innovation.
Probably we will first have to change campaign finance laws, though.
Why is reproducibility important? Let's say group A reports some really neat genetics in mice. Group B doesn't have much interest in reproducing it in mice (little potential for scientific rewards) but tries the same thing in primates and it doesn't work. Without being able to reproduce the work of group A, group B doesn't know whether there is a genuine difference in primates, whether there is something wrong with their procedure, or whether group A just published an incorrect or fraudulent result.
Peer reviewers for reputable journals should insist on reproducibility, which should include a binding offer by the authors to make available all necessary materials to other scientists to reproduce the results and build on them. If anything else were to get published, it should at least be marked in big, red letters as "irreproducible" and should not count much towards someone's scientific publication record--after all, it might all be invented.
Most data from publicly funded projects does get published eventually. Data is often withheld for many reasons. Usually, the scientists simply want first credit for the work - early release of info would give competing labs an advantage. In this case, it's not to push a project to market, but to show goos results to get further funding for the same or related projects. There is a limited amount of funding available from government sources (NIH, NSF, etc.) and the review committees who look at grants demand to see results before they fund research. Current and past publications are indications of the scientist's success. Also, publications are often used as a meter-stick of productivity and original thinking when deciding tenure and graduation of Ph.D.'s so there is considerable interest in keeping data secret to get the publication. Publications will not be accepted if it's been done already by your competitor.
Relating to genetic research specifically, whether it's patented, published, or not, there is a huge heap of genetic data in the NIH GenBank database:
http://www.ncbi.nlm.nih.gov/
IANAL but I believe you can subpoena federally funded projects under the Freedom of Information Act (5 USC 552). This would probably be very obnoxious though, but I think I read somewhere that certain large corporations have tried this to effectively steal research data from federally funded projects for their own private (secret, unpublished) efforts.
This is a place where research scientists could really use some good old fashioned technological and social help from programmers. Consider a typical computer-administered psychological experiment's process:
- Write code to run the experiment and log the data. If you didn't document the code or write self-documenting code, you'll have trouble when someone wants the data later.
- Run the experiment and collect those log files. If the log file format isn't self-documenting, you'll have trouble when someone wants the data later.
- Get all the log files transformed into a format that can be usefully imported into statistical software. If you didn't document all the variables and values in the resulting stat file, you'll have trouble when someone wants the data later. And most statistical packages allow you 8 characters for variable names and make detail labelling of variables and values highly tedious.
- Analyze the data and produce some output. If you didn't save the analysis details (as is all too easy to forget if you're doing stats with a dialog-box-based program), you'll
... (well you know the rest).
- Write a paper describing what you did and submit it to a journal. Have it accepted (hopefully) in 4-6 months. Have it appear about 6 months later. It is now probably 18-24 months since you started the study. If you're lucky, you've probably changed computers at least once by now, and possibly offices/buildings/universities, too. If you can find the data yourself and understand what it means, you're ahead of the game.
This is not too far from the problem of managing a source code project over time and across maintainers. It's not enough for professional scientists to have standards for retention and sharing of data -- we need a tutorial in documentation (and statistical and other software packages that better support it.)I think you'll find that very little has changed lately. Scientists have always been very careful about what information they share with others, for fear of giving an advantage to competitors.
If a project is in the early stages, you don't talk about it at all.
If a project has produced some great results, and it is well in progress, you'll talk about it, but might be a bit hazy on the details. For example, take a geneticist who is hunting for genes contributing to a certain disease. He/she has it partially narrowed down, and is showing a map of the BACs and YACs in the candidate region. Try asking them what chromosome they are looking at. They won't tell you.
If a project is near complete, and is being written up or has already been submitted to a journal, you'll be very open. The odds of being "scooped" at this point are minimal.
These rules vary somewhat depending on whether we're talking about a resource-rich lab that works on projects almost no one else can do, or a small lab doing projects that can be rapidly repeated somewhere else. But in general I think they hold true, and have for many years.
Open source and communication in computing brought C, Unix, the Internet, e-mail, etc.
What has your information-control ethic brought? .NET? Wait and see how well THAT works.
The concern is simply that the attitude you seem to approve of tends to stifle progress. Of course, you could simply insist on your self-centered view and insist that the resulting rate of progress is the best of all possible worlds. Buy some old copies of 'Pravda' from the post-collapse Soviet Union, that could help show you how to argue such points...
laws against people patenting human (heck, even animal) genes. If your genes are all patented, you would either a) have to pay a royalty to live, or b) have to be exempt, so it'll be pay or die in a few years (like it isn't already).
The only benefit of gene patents is you can sue the company that patents the Alzheimer's Syndrome gene(s) for wrongful damage by a defective product!
If you won't share then you're not really a scientist, but a greedy corporate lackey; these people should be shunned and considered pariahs in the scientific community as they represent the antithesis of that for which science stands.
People writing here should consider that to produce a journal paper, which is not an incremental paper (That is, the work has not been mostly published before- what the public thinks of as publishing your work) takes somewhere between 1 and 2 weeks of full time work.
Consider the dilemma, scientists have to choose between telling others about their work, or doing science. Which would you choose?
"Open source and communication in computing brought C, Unix, the Internet, e-mail, etc.
"
Wrong. Those were brought to you by AT &T Bell Labs in the mid-late 60's, and were far from "open". The development efforts going on there were as closed as you can get. Here's an example: The concept of "email", while not developed by Bell Labs, was privately developed for nearly 7 years before it was shown to the public in December '68. Google for Doug Englebart sometime. He worked for decades to give kiddies like you the idea the impression you were doing something new.
You need to go back and learn a little history before you open your mouth and let your foot in.
Cheers,
Bowie J. Poag
There seems to be a fair number of people actually employed in these fields responding to this article, so this seems like a good place to ask this question.
It appears to me that we're pretty far along when it comes to the biology of sickness-by-infection, where an illness is caused by being attacked by other organisms. There's a long way to go, but it seems to an outsider that most of the fundimental processes are understood, and the lion's share of what remains is of the nature of "find germ, study germ, develop treatment that kills germ without killing host"
But it also seems that we're not very far along when it comes to understanding sickness-though-internal-breakdown, where actual body processes either fail to function or function abnormally.
It strikes me that understanding how human genetics really work is the key to all survival. If we knew how every gene and every internal process functioned, then we cound re-engineer our own genome to fix problems. Eliminate cancer, eliminate AGING, and so forth.
It would thus suggest to me that working on deciphering the human genome is the most important problem in human biology in history, and perhaps even the most important problem EVER.
We should have huge amounts of public money poured into this problem, with all results made public, and all information shared.
Would you agree? Have I made any erronious assumptions?
DG
Want to learn about race cars? Read my Book
Is it realistic to share research papers knowing its sensitivity as a business information?
Once George Gilder preached about 'democratized technology' in democratic society being the winnner in comparing CDMA technology in US vs GSM(gov controlled European technology).
To win in a democratic society; use democratized method in term of the way information flows. Beside of the argument of legality of mp3, it maybe the method of making money not the way information travels. That method($$) needs a major paradigm shift and the gilt is on recording industry to come up with right method.
At the same time, all the scientific articles and research papers should desirably be able to mp3tized to boost great minds with a poor cash flow. If you want to compare your note with one of scientific mind, check the following link discussing on 'Data Withholding in Academic Genetics' along with 5 other competing sources at here.