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Soil Bacteria Show High Resistance to Antibiotics

Miraba writes "Microbiologists have found that soil-dwelling bacteria are highly resistant to antibiotics, even ones that they've never been exposed to before. While this information suggests that superbugs could arise from these bacteria, it also provides the opportunity for testing new techniques in drug development for the future."

149 comments

  1. Another diet change by AndroidCat · · Score: 5, Funny
    Beef is off the list thanks to Mad Cow. No chicken because of the bird flu. No pork because it'll be green and glowing soon. What fish? No genetically modified veggies or grain...

    And now I have to give up eating dirt!

    I guess I'll become a Breatharian...

    --
    One line blog. I hear that they're called Twitters now.
    1. Re:Another diet change by ettlz · · Score: 1
      And now I have to give up eating dirt!

      After reading that Wikipedia article, and the one linked to about.com: "it tastes nice", I can just see some posh restaurant in London serving up "gourmet" soil, giving it a really stupid and pretentious name, and — wait for it! — charging the Earth for the privilege.

    2. Re:Another diet change by Sen.NullProcPntr · · Score: 4, Insightful
      It's not likely that the bacteria in question can infect you. Your insides are a very different environment than Canadian mud. (Otherwise anyone who got a cut while out gardening would die from infection.)

      According to TFA; the real danger is if the dirt bacteria cross with bacteria that can infect humans. They seem to imply that this is likely to happen and may have already happened (resistant staph infections).

      Why this would suddenly come to light may have more to do with research funding coming up than any real danger. After all humans have been around dirt for a long time.

      But I'm the suspicious type.

      So, go ahead and have another serving of dirt;-)

    3. Re:Another diet change by no_pets · · Score: 0

      And I thought "Breatharian" was something dreamed up just for a comedy on FX. Starved

      --
      "A government is a body of people, usually notably ungoverned." - Shepard Book Quoting Malcolm Reynolds
    4. Re:Another diet change by krhaze · · Score: 1

      You can cross out Breatharism off the list too due to the US pulling out and Canada planning on pulling out from the Kyoto Accord.

      --
      Cheers!
    5. Re:Another diet change by Barbara,+not+Barbie · · Score: 1, Insightful

      And now I have to give up eating dirt!

      Bacteria might be resistant to antibiotics, but soap still kills them fine. All soap makes a great "anti-biotic", even the ones that don't say so. So if you still want to keep eating dirt, just wash your mouth out with soap - which would be a good idea in any case.

      After all, otherwise you're going to be talking dirty all the time :-)

      Now why anyone would want to eat dirt is beyond me. Is that what dirt farmers grow?

      --
      Let's call it what it is, Anti-Social Media.
    6. Re:Another diet change by Anonymous Coward · · Score: 2, Funny

      Like slashdotters, bacteria reproduce asexually. No chance of "crossing."

    7. Re:Another diet change by Heembo · · Score: 2, Informative

      No pork because it'll be green and glowing soon.

      It's way worse than that - They are going to maike Pork TASTIER through generic engineering! You want to talk scarry? Check out this article: http://www.cnn.com/2006/TECH/science/01/20/pig.gen ome.ap/ "Researchers to map pig DNA"

      --
      Horns are really just a broken halo.
    8. Re:Another diet change by nanobuggs · · Score: 2, Informative

      there are many ways of 'crossing', ie exchanging of genetic material - through viruses (transduction0, by free DNA(transformation), cell-to-cell contact + plasmid(conjugation).

    9. Re:Another diet change by AndroidCat · · Score: 1

      Mmmmm, this tastes like Soylent Green!

      --
      One line blog. I hear that they're called Twitters now.
    10. Re:Another diet change by CDMA_Demo · · Score: 1


       
      Underneath the bridge

      The tarp has sprung a leak

      And the animals I've trapped

      Have all become my pets

      And I'm living off of grass

      And the drippings from the ceiling

      It's ok to eat fish

      'Cause they don't have any feelings


       

    11. Re:Another diet change by karnal · · Score: 1

      there are many ways of 'crossing', ie exchanging of genetic material - through viruses (transduction0, by free DNA(transformation), cell-to-cell contact + plasmid(conjugation).

      Me gettin' my groove on(copulation), makin' love in the bedroom(ejaculation), etc.

      --
      Karnal
    12. Re:Another diet change by Anonymous Coward · · Score: 0

      Hello Grassfed Buffalo!

      www.northstarbison.com

      oh and by the way,

      http://www.themeatrix.com/

    13. Re:Another diet change by dunkelfalke · · Score: 1
      Otherwise anyone who got a cut while out gardening would die from infection.

      uhm, ever heard of tetanus?

      --
      Conservatism: The fear that somewhere, somehow, someone you think is your inferior is being treated as your equal.
    14. Re:Another diet change by Afrosheen · · Score: 1

      Dirt farmers grow dirt weed, usually in Mexico.

    15. Re:Another diet change by AndroidCat · · Score: 1

      Hogfather by Terry Pratchet. Old boots and mud, but once you dress them up a little...

      --
      One line blog. I hear that they're called Twitters now.
    16. Re:Another diet change by Anonymous Coward · · Score: 0
      Like slashdotters, bacteria reproduce asexually
      Slashdotters: "asexually" yes, "reproduce" no.
    17. Re:Another diet change by Vintermann · · Score: 1

      Scarry is no longer with us, but don't even think of laying a hand on that cute little pig in the cucumber car!

      --
      xkcd is not in the sudoers file. This incident will be reported.
  2. Growing Bacteria by qualico · · Score: 0, Offtopic

    And here is silly ol' me trying to infect myself with bacteria.

    http://www.activia.ca/

    1. Re:Growing Bacteria by qualico · · Score: 1

      Offtopic.
      LOL and the "Another diet change" gets +5 Funny.

      ya ok.

      At least I have the word bacteria in my post.

  3. Solution by quokkapox · · Score: 3, Funny
    Just thoroughly wipe down your dog|cat|kid with bleach when they come inside after playing in the backyard.

    Works for me...

    --
    it's a blue bright blue Saturday hey hey
    1. Re:Solution by Eightyford · · Score: 1

      Just thoroughly wipe down your dog|cat|kid with bleach when they come inside after playing in the backyard.

      Seriously, if you or your boyfriend are "playin in the backyard", you might just want to wipe yourself down with bleach too.

  4. Thankfully by Anonymous Coward · · Score: 0

    Mud doesn't get infections.

  5. Suggests the opposite perhaps? by goombah99 · · Score: 1, Insightful

    The specualtion about super bugs seems misplaced. So far antibiotics work quite well, albeit with limited lifespans of usefulness before resistance is induced. If dreaded "super bugs" were goinf to emerge from soils they would already exist or would have come about from these resistant bugs already. It has not happened.

    Taking a wild ass guess I would be unsurprised if it turned out that the reason soil based bugs show such resistance is because some other bug is already using this antibiotic and they had to develop resistance to survive. For example, look at Penicilin which is naturually produced by mold presumably for this very reason: to kill bacteria.

    So this has been going on millions of years before we came along. If a super bug was going to out there we would have found it already.

    --
    Some drink at the fountain of knowledge. Others just gargle.
    1. Re:Suggests the opposite perhaps? by Anonymous Coward · · Score: 0

      That's the kind of talk that will get you killed.

    2. Re: Suggests the opposite perhaps? by Black+Parrot · · Score: 3, Insightful

      > Taking a wild ass guess I would be unsurprised if it turned out that the reason soil based bugs show such resistance is because some other bug is already using this antibiotic and they had to develop resistance to survive. For example, look at Penicilin which is naturually produced by mold presumably for this very reason: to kill bacteria.

      We've been putting antibiotics in animal feed for a long time now. Probably the environment is "polluted" with it just like with pesticides, mercury, etc.

      --
      Sheesh, evil *and* a jerk. -- Jade
    3. Re: Suggests the opposite perhaps? by goombah99 · · Score: 1

      No that's not the reason here. They tested things like Vancomyocin which is not in animal feed.

      --
      Some drink at the fountain of knowledge. Others just gargle.
    4. Re:Suggests the opposite perhaps? by Malor · · Score: 4, Informative

      Did you actually read the article? They talk at length about how the soil is, well, a giant germ-warfare zone. Bacteria are all attacking each other all the time. Two of the strains they pulled out of the soil were resistant to 15 of the 21 antibiotics with which they tested. They explicitly mention that many of the antibiotics are already synthesized by competing bacteria. They believed, though, that it was very unlikely that any bacterium would ever have been exposed to all the drugs they were resistant to. The researchers believe the germs are using existing defense mechanisms to apply to new (to them) antibiotics.

      Your assertion that 'because no superbug yet exists, none ever will' is just, well, stupid. That's like saying that nothing ever changes... yet, somehow, we have people now, and we didn't forty or fifty million years ago.

      The modern world is unique, from an evolutionary standpoint, so none of the existing bacteria will have evolved to deal properly with it. They're working on that. A superbug is only a matter of time.

      MRSA is a pretty damn good first iteration.

    5. Re:Suggests the opposite perhaps? by salec · · Score: 1
      Taking a wild ass guess I would be unsurprised if it turned out that the reason soil based bugs show such resistance is because some other bug is already using this antibiotic and they had to develop resistance to survive. For example, look at Penicilin which is naturually produced by mold presumably for this very reason: to kill bacteria.

      If Penicilin kills off "the bugs" that can be found in same living space with mold, it should be assumed that its effectivness in doing it is result of ongoing competition between the two. Success in eliminating competition in one area does not guarantee same outcome in some other area ("Sure, the lion is king of the jungle, but airdrop him into Antarctica, and he's just a penguin's bitch." -- Dennis Miller.), or at other time. In other words, penicillin mold and bacteria affected by Penicillin "grew up in the same neighbourhood" and "learned each others' tricks".

      Rise and demise of Penicillin is very important lesson: We should raise vriety of our own microbe combatants against "Superbugs" and expose our strains to new threats we encounter. Sure in the wild there are molds or other microbes capable of taking Superbugs out. Oh, yes and... we should be more cautious against infections - something we learned to ignore during "The Golden Age of Medicine" when we caught that false feeling of invulnerability (even worse - you get ill, you don't have to go to school, hoorah!). We shouldn't rely on our last resort "secret weapons" (which are effective only while enemy is unprepared for it) as common cure.

      Even the trick of exposing natural enemies of superbugs to them may fail - ultimately, we will select patogenic bacteria into fast-adapting top notch killers. Perhaps we should take the opposite, natural path - promote their "less sharp" relatives to "steal the ground" from them. So, we need a kind of "window discriminator" antibiotics, one that would kill only most dangerous microbes, while leting other, "meek" to "inherit the Earth".

      However, spending resources on synthesys of "antibioyic-aza's" makes "Superbugs" weak competitors to their relatives, provided there was no abundance of antibiotics in their common environment. Perhaps "fighting fire with fire" may lead to cure: when heavy infected with resistant strain, introduce another, nonresistant strain of the same specie to the highly infected areas and let them prevail over "resistants" as much as bearable, THEN strike them with antibiotics!
  6. from the stars or from below? by Anonymous Coward · · Score: 1, Funny

    Somehow, somewhere, sometime, something's gonna' getcha'

  7. As someone in Microbiology... by CupBeEmpty · · Score: 5, Interesting

    I am not really surprised that soil bacteria are incredibly hardy. Remember that Bacillus anthracis (or Anthrax) is a bacterium that is endemic to soil. It is an incredibly hardy bacterium that can last as a spore in the right conditions for years (literally decades). Bacteria that live in the soil live in a hostile environment, to which they will develop methods of immunity. If a bacteria can live in soil, which is a hostile environment then one might guess that the same bacteria could handle the relatively "easy-to-live-in" human body. It is also interesting to note that many of our antibiotics are derivied from organisms that fight off bacterial infection. These same organims are prevalent in the soil. I am not sure what the big surprise is here?

    1. Re:As someone in Microbiology... by Onuma · · Score: 4, Interesting

      Nature will find a way...

      I'm not surprised in the least. Having studied Forensic science - not quite as detailed as microbiology - I know a little about this subject. Organisms living in soil are exposed to numerous chemicals and other species, it's a wonder that they're not immune to even more antibiotics and disinfectant chemicals.

      Another point: are these same resistant organisms hostile towards humans? They could simply exist without needing us in the least. They could also be beneficial, like the organisms which live inside and outside of our bodies; symbiotes.

      I think what is worse than bacteria becoming resistant to the drugs we use is our haste to use such drugs. People are far too dependent on prescription and over-the-counter medications these days, even if it is known that said medications will not cure or even treat the symptoms. Zithromax is not a proper prescription for the common cold (I have been prescribed this by Army doctors, for exactly this reason). I'm a fan of the placebo - let them think it will work, and chances are it will.

      --
      What else can happen when an unstoppable force collides with an immovable object?
    2. Re:As someone in Microbiology... by edbarbar · · Score: 1

      Two environments can be "harsh", yet have orthogonal dimensions of "harsh."

      Some animals live in your intestines. Pretty harsh environment, but they do. It doesn't mean they can survive in the ground, nor that ground living bacteria can live in your intestines.

      --
      Ed Barbar, President and General Manager, Furnit USA
    3. Re:As someone in Microbiology... by Dr+N0 · · Score: 1

      Please do not describe my body as easy to live in.

      --
      But I STILL say no more than 10 to 20 million killed.
    4. Re:As someone in Microbiology... by MagicDude · · Score: 1

      People are far too dependent on prescription and over-the-counter medications these days

      To which over the counter medications are you refering to? For the most part OTCs don't directly affect infections, only our response to them. NyQuill is just anelgesics, cough supressors, and decongestants, nothing meant to kill bacteria. Over the counter medications just make us feel less miserable while sick.

    5. Re:As someone in Microbiology... by nanobuggs · · Score: 1

      First, according to that study, many, not all microbes tested are resistant to antibiotics. Secondly, we haven't found all antibiotics yet, which are, by the way, produced by soil fungi and bacteria. Also, I was a bit confused that G.Wright et al just 'threw 21 different antibiotics at the bugs to see if they could survive' - at those Streptomyces, who actually produce antibiotics! Of course they are not resistant to all of them, but.. And, our body is far from being "easy-to-live-in" by the way :) - just think of your pH 2 stomach! Isn't that an extreme environment?

    6. Re:As someone in Microbiology... by Anonymous Coward · · Score: 0

      sorry, yours is not easy to live in... just easy to vist. slut.

  8. The always optimist, eh? by physicsphairy · · Score: 0
    While this information suggests that superbugs could arise from these bacteria, it also provides the opportunity for testing new techniques in drug development for the future.

    Funny, the first thing that popped into my head when I thought about this was BIOWEAPON.

    What do you think the first thought that pops into Kim Jong Il's head is going to be? Mahmoud Ahmadinejad? The DoE? Gotta be pre-emptive, ya know....

    1. Re:The always optimist, eh? by Anonymous Coward · · Score: 0

      Behold, dirty-bomb 2.0.

      Why waste money and effort dealing with radioactive materials?

      Use dirt instead!

      Radioactive materials tend to kill bacteria that might make victims ill.

      Dirt is actually resistant to antibiotics!

      Dirty-bomb 2.0,
      "what did you think when they said dirty bomb in the first place?!"

    2. Re:The always optimist, eh? by penelope0502 · · Score: 1

      It's the next step in military escalation: clods of dirt!

    3. Re:The always optimist, eh? by DogDude · · Score: 1

      The first thing that I thought was "pandemic". Oh, Jesus Christ on a toothpick, do I want to see a pandemic that wipes out most, if not all of the human race, in my lifetime. I'm betting on bacteria to take out people. My GF is betting on a virus. I'd be happy with either one. Wouldn't it be ironic if humans are wiped out by something as simple as a really common bacteria that just developed resistance? I would most definitely laugh my ass off before bleeding out my eyes and dying.

      --
      I don't respond to AC's.
    4. Re:The always optimist, eh? by lakin · · Score: 1

      No need to worry, they wont be able to get their hands on it. Im pretty sure the Patriot Act means as soon as the FBI reads the article these terrorist bacteria and the soil harboring them will be detained indefinitely.

      --
      Paul
  9. Crocodile blood antibiotics by ShnowDoggie · · Score: 4, Interesting

    Alligator/Crocodile blood anyone? They live in swampy places, fight even each other, and do not seem to get infections. (Well, not as easily as humans anyway ...) Here is just one link: http://news.bbc.co.uk/2/hi/health/4155522.stm

    1. Re:Crocodile blood antibiotics by jcr · · Score: 2, Interesting

      I've also heard that vultures and other scavenging birds have incredibly effective immune systems. They must be exposed to all kinds of nasty bugs, eating decaying carcasses as they do.

      -jcr

      --
      The only title of honor that a tyrant can grant is "Enemy of the State."
  10. Natural or acquired resistance? by syncrotic · · Score: 1, Interesting

    One has to wonder if the soil-dwelling bacteria have a natural resistance to antibacterial agents, or if it evolved over the course of the last half century. We pump farm animals full of antibiotics that they don't really need, and said animals produce extraordinary amounts of solid waste full of highly diluted antibiotics and their metabolites. This waste becomes fertilizer, which means it's spread over huge surface areas where it leaches into the ground.

    Could constant low-level exposure to antibiotics be responsible for the resistance?

  11. Soil != Living Human by pkhuong · · Score: 4, Interesting

    Topic says it all. Different pH, temperature, humidity, ... Bacteria, fungi (etc) that thrive in the ground usually don't like it as much in a hot, warm and nearly neutral human body. We don't have a lot of things that work very well on fungi (heck, most of our antibiotics come from fungi), but they don't represent a large danger, simply because our insides are usually a bit too warm for them. Let's not panic too early.

    --
    Try Corewar @ www.koth.org - rec.games.corewar
    1. Re:Soil != Living Human by Anonymous Coward · · Score: 2, Informative

      Conjugation. Bacteria can exchange the plasmids that impart resistance. They hook up with little tubes between them. The danger here is not in soil bacteria, but in the chance that these plasmids will transfer to infectious bacteria. The significance here is that they discovered that the genetic code to resist 15 antibiotics is all around us in the soil, and it just takes a chance meeting for plasmids to be exchanged and for resistance to be imparted in this way. It is just a matter of time, and it has happened before.

    2. Re:Soil != Living Human by darkmeridian · · Score: 1

      The article says that the genes from soil bacteria may get transferred to human pathogenic bacteria. Strains of bacteria resistant to vancomycin are believed to have evolved in this manner. Still, no one is calling for panic. The scientists in the article are researching the mechanisms by which the soil bacteria use to neutralize antibiotics so that future antibiotics can be improved.

      --
      A NYC lawyer blogs. http://www.chuangblog.com/
    3. Re:Soil != Living Human by (negative+video) · · Score: 2, Interesting
      We don't have a lot of things that work very well on fungi (heck, most of our antibiotics come from fungi), but they don't represent a large danger, simply because our insides are usually a bit too warm for them.
      Nah, fungi just love warm wet guts. What they don't like is our immune systems. Fungi have many more types of protein than bacteria, and lack the capsule that bacteria hide inside, making them highly susceptible to the human adaptive immune system. With a strong immune system, you can eat live yeast as food. On the other hand, with Soviet Immune Suppresion, yeast eat you!
    4. Re:Soil != Living Human by Velox_SwiftFox · · Score: 1

      They don't terribly like the normal, healthy human bacterial microbiota, either. Broad spectrum antibiotics tend to cause fungal infections merely by killing off the competition.

  12. This just in! by Millenniumman · · Score: 5, Funny

    Studies have shown that eating dirt is, in fact, unhealthy.

    --
    Stupidity is like nuclear power, it can be used for good or evil. And you don't want to get any on you.
    1. Re:This just in! by gEvil+(beta) · · Score: 1

      However, eating clay can come in handy.

      --
      This guy's the limit!
    2. Re:This just in! by nido · · Score: 1

      gonna disagree with you there. Bacteria are our allies, not our enemies. All of us have billions of bacteria living in our digestive track. Antibiotics kill off the 'good' bacteria - the ones that help us digest our food, synthesize vitamins, etc - allowing 'bad' bacteria to take over.

      So eating dirt might be a good idea - gotta populate those intestines & train your immune system somehow, unless you're planning on living in a bubble...

      --
      Learn the rules so you know how to break them properly.
      www.teslabox.com
    3. Re:This just in! by DogDude · · Score: 1

      I agree. I think that not eating and playing in dirt like normal people is why kids these days are so fucking fragile (insane allergies, asthma, etc.). If I were to breed, I'd tell my kids to go the hell outside and play in the dirt (like I did).

      --
      I don't respond to AC's.
    4. Re:This just in! by yurigoul · · Score: 1

      I'm disagreeing with that, too. I have a serious bowel-illness that has no cure and only people living in the more civilised and hygienic countries get it. One of the cures that is experimented with is bringing in parasites that could be missing from our gut since it was killed of by modern hygienic standards.

  13. Major Oversight: Who will develop the antiobiotic? by reporter · · Score: 3, Interesting
    The article starting this thread seems to imply that these superbugs in the soil might be used as test subjects to check the efficacy of new antibiotics. However, there is a more serious issue: American companies are abandoning the development of new antibiotics.

    There is a touch irony here. The major justification for non-socialized medicine like that in the United States is that private enterprise will provide the economic rewards which will spur innovation in developing new drugs. However, what happens when the capitalistic system does not provide the necessary rewards?

    Such is the case with new antibiotics. Typically, patients take antibiotics for a week and never consume the stuff again until the next infection arises. By contrast, drugs treating chronic conditions like excessive cholesterol are consumed daily and hence provide signficant financial rewards. As a result, American companies have abandoned the development of new antibiotics in favor of drugs treating chronic conditions.

    What is the point of using superbugs in the soil to test the efficacy of new antibiotics when Americans companies are not developing new antibiotics?

    Then again, in the end, we are all dead.

  14. Antibiotics by eebra82 · · Score: 2, Informative

    An antibiotic is a drug that kills or slows the growth of bacteria. Antibiotics are one class of antimicrobials, a larger group which also includes anti-viral, anti-fungal, and anti-parasitic drugs. They are relatively harmless to the host, and therefore can be used to treat infections. The term, coined by Selman Waksman, originally described only those formulations derived from living organisms, in contradistinction to "chemotherapeutic agents", which were purely synthetic. Nowadays the term "antibiotic" is also applied to synthetic antimicrobials, such as the sulfonamides. Antibiotics are small molecules with a molecular weight less than 2000. They are not enzymes.

    http://en.wikipedia.org/wiki/Antibiotics

  15. Dirt's a tough place to live by HangingChad · · Score: 3, Insightful
    Soil is pretty difficult environment for survival. You could make the case those microbes have earned the right to live there by being tough sonsabitches. When we wanted antibiotic resistant bacteria, we used to go take samples at the hospital. Some of those cultures were scary. The bugs that survive at the hospital are the toughest mofo's on the culture block.

    Just like weeds picking up resistance to herbicides. With the rampant application of weed killer, we're actually breeding tougher weeds.

    There's a reason they survive. It's because they're tough and adaptable. Sets up an interesting situation. We depend on modern herbicides and pesticides to maintain the food production it takes to feed a planet that's already over-crowded. But the weeds and insects we're trying to kill aren't sissies. At some point the chemicals we have to use to kill them are start going to take a toll on us.

    Or maybe they already are.

    --
    That's our life, the big wheel of shit. - The Fat Man, Blue Tango Salvage
    1. Re:Dirt's a tough place to live by RobertLTux · · Score: 1

      a "neat" tip if you land up in the hospital you might want to get a pack of cheap pens and then if the doctors/nurses leave your room have them switch to a new pen.

      --
      Any person using FTFY or editing my postings agrees to a US$50.00 charge
    2. Re:Dirt's a tough place to live by nanobuggs · · Score: 1

      As in the case of weeds, genetic engineering solved the problem by producing GM crops/foods etc, so the next thing is humans, being resistant to harmful bugs! just wait for another 10 years or so..

    3. Re:Dirt's a tough place to live by Lord+Kano · · Score: 1

      We depend on modern herbicides and pesticides to maintain the food production it takes to feed a planet that's already over-crowded.

      We have more than enough arable land and labor to feed everyone on this planet. The problem is the greedy bastards who hoard resources for themselves and cause others to stave.

      LK

      --
      "Hi. This is my friend, Jack Shit, and you don't know him." - Lord Kano
  16. Re:Major Oversight: Who will develop the antiobiot by Millenniumman · · Score: 1

    Well, if no one does, then someone will, because the profit will be enormous without competition. And then someone else will come in with a cheaper antibiotic, with a lower profit margin.

    --
    Stupidity is like nuclear power, it can be used for good or evil. And you don't want to get any on you.
  17. You're probably right, but I wonder... by TrekCycling · · Score: 2, Interesting

    I instantly thought of this when I read the headline. I'm sure you've seen the studies. The ones that say that the average tap water has X-particles per million of Prozac, X-particle per million of Xanax, etc. The point being that human beings consume large amounts of medicine and then much of them gets excreted out somehow and eventually (and unfortunately) find their way into the ecosystem. Our water and probably our land. So a study like this makes me wonder (and feel free to club me over the head if this is impossible, because I'm just a programmer, not a a biologist) if it's possible that as we use more and more antibiotics on ourselves, on cows and chickens in large amounts, if at some point these don't make their way into the system and possibly help promote a more aggressive evolution of these superbugs. I would like to see a study done on that if there isn't already a definitive answer to *that* question.

    1. Re:You're probably right, but I wonder... by Anonymous Coward · · Score: 0

      The jury is still out on that one, but your theory does have alot of support. Do a pubmed search and see for yourself. It seems that the major offender is the sludge from wastewater treatment that gets applied to crops.

    2. Re:You're probably right, but I wonder... by DogDude · · Score: 2

      There are tons of studies out there, already. It's been happening for quite a while now. People, every day, die from common bacterial infections that have evolved to a point where doctors simply don't have what they need to kill them. It's an escalating arms war that we (humans) will eventually lose. I personally know two people that died, in hospitals, from simple bacterial infections. I believe that the CDC has been warning about overuse of antibiotics for a while now, but unfortunately, you can find antibiotics in just about every consumer product, because people are so fucking clueless, and child-protective at the same time. This is such a real problem, that I make a point NOT to buy anti-bacterial cleaners for my house, which is starting to be a tough thing to do. Doctors of all kinds, when cleaning their work areas, generally alternate between several types of antibiotic measures because antibiotic resistance is such a real problem, now.

      --
      I don't respond to AC's.
    3. Re:You're probably right, but I wonder... by TrekCycling · · Score: 1

      I agree, of course. But I guess it had never occurred to me until this article that the antibiotics arms race isn't just a war taking place inside of our bodies, but also in the ecosystem as well. Interesting.

    4. Re:You're probably right, but I wonder... by Anonymous Coward · · Score: 0

      DogShit, you're a dickless wonder.

  18. ... & dirt don't hurt by Joebert · · Score: 2, Funny

    So much for "God made dirt & dirt don't hurt."

    --
    Wanna fight ? Bend over, stick your head up your ass, and fight for air.
    1. Re:... & dirt don't hurt by Anonymous Coward · · Score: 0

      Fucking public schools!

  19. I'm glad I didn't take that graduate position! by turtledawn · · Score: 2, Interesting

    I was recently considering entering graduate school, and one of the fellowships I was looking at was for a study examining very nearly this topic- the effect of antibacterial-contaminated runnoff from farms on soil and watershed bacteria, with a possible extension into effects on the digestive flora of aquatic life. I didn't take it, but it seemed like a very interesting and important subject. If it's made it into the mainstream press already, though, I would have been facing a pretty limited opportunity for publishing. I'm glad the information's out there! Maybe this wll help make clear the importance of more limited prophylactic antibiotic use.

    --
    Uh, "if it looks roughly mouse-shaped according to my infra-red sensitive pit, eat it"? --Chris Burke 09-08-10
  20. How to explain that? by Jodka · · Score: 4, Interesting

    Could the natural resistance of soil bacteria to antibiotics result from the natural presence of antibiotics in soil?

    Penicillin, the quintessential antibiotic, is derived from mold. Suppose that the molds and bacteria are battling it out in the soil, and the molds attack the bacteria with antibiotics, so then the bacteria evolve resistance to those antibiotics.

    --
    Ceci n'est pas une signature.
    1. Re:How to explain that? by Anonymous Coward · · Score: 1, Insightful

      When I took high school biology we learned that many antibiotics were developed from soil molds. So maybe soil bacteria are highly exposed to same fungi and have natually developed defences?

      Fortunately soil bacteria stays in the soil and doesn't attack people very often.

      Next topic please.

    2. Re:How to explain that? by nanobuggs · · Score: 1

      That's exactly how it works! microbes live in communities - so fungi, algae, bacteria all live in the same spot. They occupy different ecological niches though - they eat different 'foods', excrete chemicals, that other microbes consume, etc. There's always a sort of an equillibrium in the community. Excreting antibiotics is a form of self-defense.

  21. Making antibiotics useless by Savage-Rabbit · · Score: 1

    The specualtion about super bugs seems misplaced. So far antibiotics work quite well, albeit with limited lifespans of usefulness before resistance is induced...

    True enough, but the problem is that this induction of resistance is being seriously accelerated by massive abuse and oversubscription of antibiotics. Using anti biotics on a large scale in agriculture for example may be profitable but it has also ruined several drugs that could otherwise still be used to treat humans. Similarly massive 'convenience subscription' of antibiotics in cases that were not all that serious, just to get somebody to work a couple of days earlyer or save them a bit of discomfort, has also contributed to creating resistant bacteria. And this does not just go for anti bacterial drugs. The Chinese managed to wreck several antiviral drugs in the sense that they are probably useless for treating bird flu by using them on chickens. Trying to argue that human abuse of these drugs has not contributed to the on the emergance of superbugs is silly.

    --
    Only to idiots, are orders laws.
    -- Henning von Tresckow
    1. Re:Making antibiotics useless by slick_rick · · Score: 1

      Why would you treat bird flu (which by definition is a virus) with an anti-biotic?

      --
      apt-get install redhat please god - Me (take it easy, I love Debian)
    2. Re:Making antibiotics useless by Rob+Simpson · · Score: 1

      The parent said "the Chinese managed to wreck several antiviral drugs", not antibacterial drugs. If that's the case, they must be violating a bunch of patents, since even the cheapest ones I can think of would cost more than the chicken if used for more than a couple days. More likely, there just aren't any antivirals that have ever been very helpful for any flu...even the ones approved for (regular) influenza, Tamiflu and Relenza, were almost useless - I haven't seen either for years.

  22. WOW... how wrong. by CupBeEmpty · · Score: 2, Interesting

    Well I am glad that the Boston Globe, pinnacle of science that it is has deemed antibiotics to be a dead field. I would say that this cannot be more wrong. Not only are antibacterials being actively sought I have first hand knowledge of this fact. Private industry and the government have poured millions into finding vaccinations, antimicrobials, and many other biological elements of disease resistance. Your statement is wrong at best and intentionally misleading at worst. The most hilarious part is that the US is by FAR the leading country in this tpye of research. This is why everyone and their mother in the fields of immunology, microbiology, and biotechnology, wants a PhD from a US institution. This is why my boss gets at least 20 emails a week from people outside the US wanting to join our lab, despite the fact that it is very small.

    1. Re:WOW... how wrong. by DocOmega · · Score: 0
      We also aren't going to stop developing antibiotics because we fear bugs. When a news report says x million people die of a heart attack, we don't blink an eye. We expect people to die from heart attacks. If a news report comes out saying x million people die of MRSA, everyone would freak out. Tons of money would be poured into antibiotic R&D, and prices would go up quickly at the pharmacy.

      Also, when an infection spreads, many people have to take antibiotics, even if it's only for a couple of weeks. Many antibiotic treatment courses run $50-$100. Multiply that by, let's say 7% of your co-workers, and that's a decent profit for each new round of the latest thing that's 'going around'.

      --
      Meh
  23. Evolution... by TCQuad · · Score: 1

    Organisms living in soil are exposed to numerous chemicals and other species, it's a wonder that they're not immune to even more antibiotics and disinfectant chemicals.

    In reality, it's not a matter of "immune". There only needs to be enough of a resistance that the process of evolution can take place. Letting the bacteria multiply, even slowly, will eventually create complete resistance.

    1. Re:Evolution... by HiThere · · Score: 1

      Actually, it's more like a cost-benefit analysis. Almost every immunity to a drug or anti-biotic has a cost. One of the more common ones is an ion-pump which not only costs energy to keep it running, but can lose you vital resources in the process of "keeping out the drugs". So it's too expensive to keep unless you are living in an environment where the drugs it defends against are commonly encountered. Other defenses have similar costs.

      So if a bacterium isn't exposed to a particular drug for several generations, it's quite likely to lose the immunity (i.e., the non-immune strains will proliferate at the expense of the immune ones) unless that adaptation serves some other use that justifies, or at least partially justifies, the cost.

      Note that the ion-pumps that I used as an example are useful against a great many chemical attacks. As a result strains of bacteria that have them are quite common, and they differ not in presence or absence, but in the number of pumps they keep installed.

      --

      I think we've pushed this "anyone can grow up to be president" thing too far.
  24. But soil bacteria... by bigattichouse · · Score: 1

    But soil bacteria were the major *SOURCE* of soil bacteria after penecillin was discovered... of *COURSE* they are resistant, they are the source of many of those drugs.

    --
    meh
    1. Re:But soil bacteria... by brianf711 · · Score: 2, Informative

      This is a critical comment and should be modded up. I was about to make the same comment (so hence I may be biased for my praise of your comment).
      http://www.britannica.com/nobel/micro/629_1.html
      Waksman was studying soil bacteria when he discovered streptomycin. Numerous other antibiotics were identified from similiar bacteria, so it is not surprising, as you mention, that many forms of bacteria are resistent to antibiotics, since either the soil was the original source for the antibiotic, or the mechanism of action for the antibiotic for which future chemical compounds were screened. For these reasons, I don't see what all the concerns are. Sounds like just uninformed fear-mongering.

    2. Re:But soil bacteria... by eluusive · · Score: 1

      MY GOD?! Soil bacteria is the major source of soil bacteria? Holy smokes batman!

  25. Required Simpsons quote, adaptively mutated by Tsar · · Score: 3, Funny

    Ladies and gentlemen, er, we've just read the article, and, uh, what we've seen speaks for itself. The soil beneath us has been taken over -- "conquered", if you will -- by a master race of antibotic-resistant bacteria. It's difficult to tell from this discussion point whether they will consume the captive ants or merely enslave them.

    One thing is for certain, there is no stopping them; the superbugs will soon be here. And I, for one, welcome our new microscopic overlords. I'd like to remind them that as a Slashdot poster with excellent karma, I can be helpful in rounding up others to toil in their underground plague nurseries.

    1. Re:Required Simpsons quote, adaptively mutated by EvilSporkMan · · Score: 1

      Doesn't everyone have excellent karma by now?

      --
      -insert a witty something-
    2. Re:Required Simpsons quote, adaptively mutated by Anonymous Coward · · Score: 0

      Doesn't everyone have excellent karma by now?

      You're being nitpicky. The quote is culled from the Simpson's episode "Deep Space Homer," which most long-time denizens of that particular /. subculture will readily identify. In the original quote, Kent Brockman identified himself as "a trusted TV personality;" the mutation seems obvious. So let's try to keep the discussion on a higher level, shall we?

      -insert a witty something-

      Yeah, that's what your sister said last night.

  26. From capn' o-da obvious by Spy+der+Mann · · Score: 1

    Somehow, somewhere, sometime, something's gonna' getcha'

    In related news, humans are mortal. News at 11.

  27. Re:Major Oversight: Who will develop the antiobiot by mauthbaux · · Score: 1

    I agree that this is a fairly sizeable problem with capitalism. But, considering the reality of the problem, you can hardly blame them for their reluctance.

    Let's use an analogy from Star Trek. Imagine that we're using our phasers, photon cannons or whatnot to fight off the Borg. Any given setting for our weapons is only effective for a few shots. To stay effective in this fight, we need to use a variety of weapons with a variety of settings between them. Variability wins while too much repetition is death.

    Now imagine that it takes weeks, if not months or years to recalibrate weapons. Even worse, imagine that the same resistance that the Borg get is quickly passed on to the Vulcans, Ferengi, Klingons, and everyone else out there who wants it.

    Why invest the money when the enemy is frighteningly more adept at avoiding our weapons than we are at making new ones? It's a losing battle.

    This is the state of our current battle against bacterial disease. Our antibiotic weapons become obsolete before they really have a chance to become effective. Investment fizzles by default. This is why we still don't have any magic bullets against disease. Even unrelated bacteria can share their armor with the Darwin-defying trick called plasmids. Ironically, the place where the most pestilent and resistant bacteria can be found is in hospitals. The constant barrage of disinfectants and antibiotics they receive there makes them the most dangerous ones to contract. In my opinion, the next super-bug is much more likely to come from a hospital than it is to come from the soil. (Metabolic barriers are much harder to overcome than resistance ones.)

    In short, this is why so little corporate capital is being invested in antibiotics, or vaccines for that matter. The only probable return on investment they derive from it is an improved reputation in the public eye. Sadly, even that will likely fizzle as quickly as does the effectiveness of the product.

    --
    "Operating systems suck: you're better off using only the BIOS" --trainsaw.com
  28. Interesting fact by Anonymous Coward · · Score: 0

    If you've ever grown mushrooms indoors and had some contamination, its quite amazing to see that if you throw them outside the contamination clears up and the mushrooms can still grow.

    Outside is a hostile area for bactera, molds etc

    Quite an interesting phenomenon.

  29. don't flush antibiotics by iberian411 · · Score: 1

    On a sidenote, the flushing of antibiotics is contributing to the superbug problem. Flushing of any drug is bad (for example, traces of Prozac have been detected in London's water supply, traces of cocaine have been found in Italy's), but here's the question. How do you get rid of them? This has all the makings of a new cheech and chong movie.

    1. Re:don't flush antibiotics by Rob+Simpson · · Score: 2, Interesting
      That is rather difficult for some antibiotics... penicillins, for example, are eliminated primarily by being excreted unchanged by the kidney. Early on, urine was collected from patients so that the penicillin could be reused.

      As far as actual tablets, etc., go...antibiotics are usually prescribed to be taken until there are no more tablets. If you do have any meds you want to get rid of, please take them to a pharmacy - they should put it in their drug disposal bucket for no charge.

  30. Funny. by Anonymous Coward · · Score: 0

    If history serves as any indicator, the country you have to worry about using a weapon of mass destruction will be the United States.

  31. Er, Um soil is where we GET the antibiotics! by Ancient_Hacker · · Score: 3, Insightful
    There's a very good reason the bacteria in the soil are resistant to antibiotics, and you don't need a fancy new study to figure this out.

    If you research where antibiotics come from, where drug companies have for 50 years or more looked for new antibiotics, it's in the dang soil!

    yes, scientists figured out long ago to not just set out pertri dishes and hope for new varieties of spores to come to them-- they've gone out into the world collecting soil and the concomitant spores. IIRC the majority of antibiotics in use were found in the soil of various places, all over the world.

    Nothing new here.

  32. Eating dirt?? by torokun · · Score: 1

    Not being in the biological sciences, I have a question then for those who are.

    Does this mean that our kids should play in the dirt (and occasionally eat a bit), to develop immunity, or that they shouldn't, because antibiotics may not help them if they get sick from it?

    1. Re:Eating dirt?? by zymano · · Score: 1

      Good point .

      The monitor lizard lives in bacteria heavy environmnet but their immune system has been hardened.

      We could excercise our immune systems by taking a weakened bacteria or eat 'dirt' monthly but thats not going to help out the people who aren't healthy like older people.

    2. Re:Eating dirt?? by Anonymous Coward · · Score: 0

      no. soil bacteria themselves are unlikely to infect you, so there's not much point in trying to develop "resistance" to them. if you eat a lot of dirt, you're much more likely to just get a nasty case of pin worms or something.

  33. Re:diet change by Anonymous Coward · · Score: 0

    You dont have to cut them out of your diet. Just be aware of the quality and only buy the best.

    Look for "No hormones, no antibiotics, grain fed" etc. Something along those lines. "All Natural" has a very general legal definition, so you need to ignore that. Its more of a marketing gimmic.

    Usually you are looking at at least double the cost, but the meat is noticably tastier, and has fewer heath worries.

    When eating out, avoid all fast food meat, that includes subs and pizza. That stuff can get downright dangerous, they dont test for a lot of nasties, including Bovine-CJD.

    Chances are, a lot of people already have it. I think its going to be a worldwide pandemic. Hell, I might already have it as I didnt start eating healthy until 3 years ago. I had been avoiding fast food burgers for a good decade now, but i was a big pizza/subs guy. All you needed to do was pick up a chance infected prion and boom, you are on a slow yucky 15 year decline.

    The only way to tell if someone died from it is to test the brain tissue after death, and they dont normally test for it anyways.

    Anyways, unsafe factory farming is the cause of this. Recycling dead animals as feed, high stress condition, pumped with growth hormones and antibiotics, it just doesnt make for quality meat. It doesnt take a rocket scientist to see the problem here. Factory-style farming CAN be done properly There are several companies that do. You just need to be aware.

    Oh yeah. I wouldnt worry about the local water, chances are its fine. Genetically engineered fruits and veggies are often delicious and inexpensive due to super-high outputs. I buy that stuff all the time. Just make sure you wash your fruits and veggies well.

    I thought the green and glowing pigs were awesome. Go science :)

    Keep fish in small quantities. Its still mostly okay, as long as you dont eat tons at a time. Yeah, output is down, but price reflects that.

    The only thing your post missed was to watch out for high fructose corn syrup. Try to limit your intake. Its in a lot of things you wouldnt realize. Read your labels!

    -end crazy hippie ranting-

  34. At some point... by sgage · · Score: 2, Insightful

    ... you just have to trust your immune system. The whole "hygienic" germ-free hysteria that our culture promotes (and which has been promoted for many years by many corporations that sell relevant products) is a self-fullfilling prophecy. If you don't eat some dirt as a kid, you won't ever develop the appropriate defenses.

    If you don't grovel around in the real world and exercise the ol' immune system, you'll have all kinds of allergies and asthma and whatnot. When I was a kid... oh, never mind. No, DO mind. When I was a kid, hardly anyone had allergies, or asthma, or ear-aches, or any of that crap.

    Blanket overuse of antibiotics is exactly the same as pesticides and herbicides ending up with pesticide and herbicide resistant pests and weeds. You can't just make "negative" manifestations of nature go away like that. Most of the /. readership is probably engineer-types, and that is engineer thinking. Biology is way, way more complicated. ;-) I feel like I'm one of the few biologists/ecologists here...

    Anyway, e.g., the polio outbreak of the 40's and 50's was actually due largely to too much cleanliness. Very young children would typically develop resistance to the (totally ubiquitous, endemic) polio virus in earlier times (via eating dirt), but "modern" notions of hygiene precluded this.

    So, eat dirt or die! :-)

    - sgage

    1. Re:At some point... by Anonymous Coward · · Score: 0

      "When I was a kid, hardly anyone had allergies, or asthma, or ear-aches, or any of that crap."

      Are you sure people didn't just fail to notice, what with all the rickets, turberculosis, polio... ...and, of course, asthma and serious allergies would just kill you if the knowledge and technology to treat it wasn't around. Understandable you never met them.

  35. Well, no kidding... by Angst+Badger · · Score: 3, Insightful

    I hate to belabor the obvious, but it's no wonder soil bacteria are resistant to antibiotics: they live in close proximity with the same fungi that evolved antibiotic chemicals to combat them. While we humans are doing a pretty poor job of judiciously using antibiotics and we are probably creating some real long-term problems by polluting the environment with antibiotics and disinfectants, we shouldn't forget that we didn't invent antibiotics, we discovered them. There are going to be lots of bacteria that are resistant to antibiotics simply because they evolved in an environment rich in fungi that produce them.

    If you want to worry about antibiotic resistant bacteria capable of causing disease in humans, hospitals are a much bigger breeding ground than soil, which harbors innumerable species of bacteria that are harmless to us or even beneficial agriculturally, and only a few that can do us harm.

    --
    Proud member of the Weirdo-American community.
  36. Soil bacteria is our friend by nevergleam · · Score: 1

    Soil bacteria is responsible for cleaning a lot of the water we dump onto the ground. Any organic solids in the water are digested by the bacteria, and the water recharges aquifers. It's drawn out again years later as clean as can be.

    This process is recreated by tertiary wastewater treatment plants where bacteria is added to sewer water to digest all the solids. The bacteria are then coagulated with a chemical such as alum and they are allowed to settle out of the water. This treated water is then disinfected by chlorine, chloramine, UV light, or some other method, and is then reused as irrigation water. It's actually clean enough to be used as drinking water, but safety concerns and common sense advise against this.

    1. Re:Soil bacteria is our friend by rahvin112 · · Score: 1

      This process is recreated by tertiary wastewater treatment plants where bacteria is added to sewer water to digest all the solids. The bacteria are then coagulated with a chemical such as alum and they are allowed to settle out of the water. This treated water is then disinfected by chlorine, chloramine, UV light, or some other method, and is then reused as irrigation water. It's actually clean enough to be used as drinking water, but safety concerns and common sense advise against this.

      1. Bacteria aren't added, they are already there.

      2. The process you just described is secondary treatment. Primary treatment is a grit seperator and a clarification tank to remove large solids. Secondary treatment is the addition of alum or other floculation chemicals that will bind suspended solids to create large particles that will settle out. Tertiary treatment involves extra treatment protocols to remove such things as phosphates and nitates.

      3. The water from secondary treatment is cleaner than what went into the treatment plant to produce the potable water but it's not safe enough to drink without the addition of some heavy tertiary treatment systems to remove the chemicals in our wastewater that aren't good for humans and in particular infants.

  37. Chemicals by nexcomlink · · Score: 1

    Well we do put chemicals into our soil either if it's to kill weed or some to grow grass my only guess is that after years of exposure to such chemicals is what makes them very resistant to antibiotics wether it be in a direct or indirect way.

  38. I have some personal experience with this by gone.fishing · · Score: 2, Insightful

    A few years ago I was working in my garden and my leg started itching, there was a small red dot mid-calf and minor swelling around it. I figured it was a bug bite. Within an hour the entire calf had turned red and was warm to the touch. I made a trip to Urgent Care and the doctor perscribed an anti-biotic and told me to go home and soak the leg in the hottest water I could stand. The next day I went into see my own doctor, by now my calf looked like an over-cooked hot dog and I was afraid the skin was litterally going to split open.

    They drew blood and attempted to locate some pus to drain but found that it was not in sacks but more or less distributed though the leg (so the attempt to lance did not result in much drainage). I was given another kind of anti-biotic and was told to continue with the frequent hot water soaks. This time the anti-biotic seemed to help because the swelling started to reduce but soon enough, the swelling started up again and I found myself back in the clinic. This time my leg had started to lose it's pulse and my foot was grayish. They ran an anti-biotic in through an IV and had me elevate my leg for a few hours in the clinic. I was given another perscription and sent home with instructions to keep my leg elevated and to give it more hot soaks. I was told to come in to be checked the following day and to cancel any plans that I had for the weekend. These last anti-biotics worked and the swelling in my leg stayed down. The following day, I dutifully returned to the doctor and was told that had the swelling not shown such dramatic improvment, I would have lost my leg.

    Through all of this, I never ended up in the hospital. I was treated with a barage of very powerful anti-biotics (the same exact ones that they use for "flesh eating bacteria") and my doctor told me that the bug I had was very closely related to that bug, he said that it was soil-borne and probably entered the skin though a bug bite.

    I was even able to keep my weekend plans but I did not walk much and had to keep the leg up a lot (I went camping but not too far away). It took well over a year for my leg to return to it's normal color and I lost some tissue below the skin, these "things" are still with me (the best that I can describe it is it is like a scar underneath the skin, you can see some roughness in the skin and there is a different texture to the area but all the muscles and everything seem just fine.

    I think my experience brings out the best and the worst of the HMO style medical system. I'm pretty confident that had I had a regular kind of insurance, I would have been in the hospital. On the other hand, the clinic was well staffed and had access to the right lab equipment and drugs to treat me. I'm glad it came out like it did and I really have to credit my doctors for everything that they did. They saved my leg.

    1. Re:I have some personal experience with this by eluusive · · Score: 1

      I call bullshit. I don't believe you at all. Did your doctor bother to actually tell you what it was you had?

    2. Re:I have some personal experience with this by winwar · · Score: 1

      "Did your doctor bother to actually tell you what it was you had?"

      They often don't unless pressed. They also might not know... The story sounds like a "typical" experience.

      That said, I doubt the antibiotics would work THAT fast, so I have a hard time believing THIS story. But the doctor response sounds typical.

    3. Re:I have some personal experience with this by Americano · · Score: 1

      Sounds suspiciously similar to a bout of Cellulitis I dealt with about a year and a half ago... essentially, an infection of the connective tissue under the skin -- lots of pain, swelling, redness... and it was actually in the back of my throat -- official diagnosis of "tonsillar cellulitis."

      The doctor's first guess was that I had strep throat... so she prescribed a course of amoxycillin. This damped down the infection, but didn't knock it out... it came roaring back with a vengeance by the third day after finishing the course of amoxycillin. When I ended up back at the doctor's office, she prescribed another round of amoxycillin, thinking that it hadn't had enough time to do the job it should. Within 2 more days of amoxycillin, it became quite clear that the amoxycillin wasn't doing the trick -- I was unable to swallow anything but water (and that, painfully), and my ability to breathe was rapidly becoming an issue due to the swelling in my throat.

      I ended up in the ER, where they pumped me full of an iv mix of saline & clindamycin, another antibiotic, and then sent me home with a prescription for a liquid clindamycin medication. And I'll tell you this: the liquid clindamycin solution tastes like what I'd imagine snot & ass would taste like, if you could ever mix the two together. But it did the trick... knocked the infection right out in a matter of a couple days (but I completed the course, don't worry, I will not be the source of a clindamycin resistant throat infection for anyone).

      The really difficult thing here -- and I don't blame the doctors, because there's only so much they can do -- was for them to determine what the infection was caused by. There are literally millions of bacteria on, in, and around your body... they treat based on symptoms, and I initially presented with symptoms strongly similar to strep throat. They pulled a strep culture, but that took time to come back (it came back negative). They never found out what specific type of bacteria caused my cellulitis, and truly told, I don't know if they could have figured it out without a whole lot of expensive testing & equipment. It's clear that the standard of care is to throw some antibiotics at it, and hope that it'll allow my body to clean up the problem and heal itself up.

    4. Re:I have some personal experience with this by cruachan · · Score: 1

      Actually it doesn't sounds too unbelievable to me. If got Cellulitus in my leg a few years back - I'm a reasonably fit 40 year old male with no immune problem. I think the bug entered through an insect bit and what was truly alarming was the speed in which it spread. Went from a mild itch to my whole shin and ankle being a deep shade of red and equisitively painful within 24 hours. The spread slowed after that somewhat, but it took the Doctors two attempts at different antibiotics - i forget which - to stop it - first batch slowed it but didn't cure (obviously resistant), second batch took about 24 hours to kick in fully, but progress was impressive thereafter. Actually getting back to normal took a couple of months though as the bacteria had destroyed quite a bit of tissues and particularly capilliaries - which made for agony when putting my leg down after having it up as the fluids drained into the leg, leaked out the capilliaries and into what was left of the muscles.

      It was quite believable to me that in a previous era I would have lost the leg and/or the infection could have been lethal within a week. Happens - as per the Orkneying saga - http://www.orkneyjar.com/history/vikingorkney/sigu rd.htm

    5. Re:I have some personal experience with this by gone.fishing · · Score: 1

      They gave me the name of the bacteria that was infecting me but I really don't remember it, hell I can't even remember the names of the anti-biotics.

      But see another reply http://slashdot.org/comments.pl?sid=174668&thresho ld=0&commentsort=1&mode=thread&pid=14530573#145317 55 and you will see I am not the only one with this experience.

      When you finally get the right anti-biotic they can work remarkably fast.

    6. Re:I have some personal experience with this by gone.fishing · · Score: 1

      Thank you.

      I think cellulitis is a sort of "generic" term (like Bronchitis) that descirbes the effect of the infection on the body but it has a cause (bacteria) and figuring out the kind of bacteria is what makes treating this so hard. Frankly, they take a sort of "shotgun" approach, using broad-spectrum antibiotics that kill lots of different bacterias.

      If I made it sound like I was cured within a short time, then I made it sound wrong. I had a longer recovery than that but I was no longer worried about my leg splitting open within a few hours and you could see that things were working (the swelling was on its way down).

    7. Re:I have some personal experience with this by cruachan · · Score: 1

      It is, comes from 'lysis', which is just a medical term for cell rupture or disruption (i.e. cellular lysis). Sounds good when you get diagnosed, but it's just a description :-). I have a Ph.D. in biochemistry, which although it's nearly 20 years since I worked in the field, does come in useful when talking to medics.

      My Doctor was quite upfront that he couldn't identify the bug/strain without extensive tests, but that wasn't too important. More a question of rolling out the antibiotics to find one that worked and keeping an eye on it in case it suddenly deterioted further (in which case treatment would have been straight into hospital and hooked up to serious antibiotic irrigation).

  39. but antibiotics haven't by Quadraginta · · Score: 1

    Antibiotics haven't been around a long time, biologically speaking. So we have no way to know if the biosphere is stable to their "sudden" (over the last 50 years) introduction.

    The point is that dumping antibiotics into the biosphere, as we have been doing for 50 years, not just by treating infection but in animal feed, antibacterial soaps, et cetera, may be having just as large-scale and important effects as dumping greenhouse gases into the atmosphere. We don't know how fast the bugs are going to evolve resistance to them, or how it will spread (as another responder noted, bacteria exchange genes with each other, so the fact that a given species doesn't infect humans itself doesn't mean it won't acquire the genes, mutate them, and pass them on).

    We don't know how we are changing the heretofore stable relationship between bacteria and the rest of the animal kingdom. Hopefull, we are doing nothing much, or at least nothing we can't deal with. But time will tell.

    1. Re:but antibiotics haven't by Sen.NullProcPntr · · Score: 1
      You make a good point. Although the original antibiotic, penicillin (bread mold), has been around for a long time, I have no idea just what the modern antibiotics are made of. Is any of it "naturally occurring"? Probably not.

      But antibacterial soap concerns me the most. I don't see a need for it, regular soap and water has always worked just fine for everyone except maybe surgeons. Every time someone uses that stuff more of the active ingredient goes down the drain and into the environment. This has the potential of creating tolerant organisms. I always go to the trouble to make sure the label on the soap container does not say antibacterial when I buy anything like that.

      Animal feed is one that is easy to overlook. I always assumed that once the antibiotic was eaten it "disappeared". Apparently some amount (most?) comes out the other end and studies actually report finding traces in the animals flesh (meat).

      Still it's probably okay to eat the dirt, but make sure at least one member of your party orders the non-dirt meal just in case;-)

    2. Re:but antibiotics haven't by DocOmega · · Score: 0

      Every time someone uses that stuff more of the active ingredient goes down the drain and into the environment.

      Speaking of going down the drain...
      Did you know that the biotransformation (defn: alteration of the structure of a compound by a living organism or enzyme) of antibiotics by our bodies is incomplete? That means that every time someone uses the bathroom while on antibiotics, some of those antibiotics go where? Down the drain.

      I really wonder what effect this is having on microbial resistance.

      --
      Meh
    3. Re:but antibiotics haven't by lamp540 · · Score: 1

      Antibiotics can be "natural", semi-synthetic or synthetic...it all depends. Like other drugs, some antiobiotics are metabolized into other substances before leaving the body and some are excreted intact. When penicillin was scarce they would collect urine from the patients and extract the penicillin and use it again.

  40. oh they're here all right by Quadraginta · · Score: 1

    Hey my SO is a nurse in the pediatric intensive care unit, and she sees kids die of multiple-drug-resistant infections all the time. I think your optimism is not justified.

    1. Re:oh they're here all right by heinousjay · · Score: 1

      Define 'all the time'

      Are we talking 100,000 a year? 10,000? 1,000? 100? 10?

      --
      Slashdot - where whining about luck is the new way to make the world you want.
    2. Re:oh they're here all right by Quadraginta · · Score: 1

      I would say very roughly between 10% and 20% of all the deaths in the PICU. "All the time" has its usual meaning of "regularly and noticeably."

    3. Re:oh they're here all right by heinousjay · · Score: 1

      I'm just trying to determine the meaning of your comments as applied to the general population. 'All the time' carries connotations that make such a determination difficult, and your followup indicates as I suspected - this is still fairly rare.

      I'd be interested in seeing hard numbers, if you have a way to get them, or know somewhere I can start researching. I've tried google, but I'm doing something wrong, because I'm not really getting anything useful yet.

      --
      Slashdot - where whining about luck is the new way to make the world you want.
  41. SimDirt by iberian411 · · Score: 1

    This could be a great new game. SimDirt.

    1. Re:SimDirt by Malor · · Score: 1

      Actually, Will Wright's spore is likely to be at least partially SimDirt. :)

    2. Re:SimDirt by Malor · · Score: 1

      Spore, capitalized. I don't want to even imagine Will Wright's lowercase spore.

  42. theories always suck. by Stumbles · · Score: 2, Interesting

    So basically once you get beyond all the mombo jumbo, what these guys are are looking to do is; find a way to develop anti-bacterial agents capable of killing microbes and their their cousins. Noble in effort but overlooks one fundamental problem. What happens when these agents start attacking the very same or similar microbs and bacteria that are essential to the growth of plants? Theres no way they can guarantee those agents will not. A disaster waiting to happen.

    --
    My karma is not a Chameleon.
    1. Re:theories always suck. by zidaneonestrife · · Score: 1

      hmmm interessting

      --
      My blog Judgement
  43. Phage treatments vs conventional antibiotic by theREALbillder · · Score: 0

    www.evergreen.edu/phage/phagetherapy/phagetherapy. htm

    Phages, as I understand it, are made from human waste, and are highly effective and many pharm-farms are after their own bugggies right now. Russians favorite shit for infections, no pun intended.

    Read the book darwins radio by greg bear (I think) for more info put across in an enjoyable but well researched manner. The comedian Gallagher, talking about hotdogs: you people gotta get some of this inya, if you stay pure all your life, one day youre going to be at a ballgame or something, and get one of these things, it gonna lay your ass out dead....

    Which is true. Also remember the greatest weapon against any bioproblem is sunlight and bleach. If you are in a situation where there has been an exposure you can create a positive pressure atmosphere for several hours with a scuba tank in a car with thte windows closed; barely open the tank and it will keep positive pressure until it runs out, and nothing will get in. Sunlight kills all bioweapons -- visit sunshine-project.org. also visit www.cancersalves.com -- its just good for you to know.

    some links about enmod, which incorporates aspects of biotech in its weaponized versions....

    http://www.luxefaire.com/19/index.html

    http://www.luxefaire.com/lordsburganimastenna01210 6/index.html

    http://www.luxefaire.com/undulatusantenna/index.ht ml

    Good luc.
    b

    ps the writer of this article comes across as some kind of naieve mammys boy...

    --
    Light Happens.
  44. this is no joke by Anonymous Coward · · Score: 0

    I had an incident of severe antibiotic resistant Staph A. Took over 6 months to beat it, nip and tuck a few times. It's like...you could croak, easy. It was very painful, I still have scars from it, and this was years ago, I can't imagine how bad it is today, other than I have seen pictures of the victims. It hits quick, you literally rot in front of your eyes, and the antibiotics available more or less *don't work now*.

    You don't want to get it. The future of "superbugs" is here now and is going to be getting worse, and quickly, go google it.

  45. Medicines by Onuma · · Score: 1

    As far as immunity and resistance, I chose my words poorly :P Sorry about that.

    With regard to antibiotics and other drugs I simply did not distinguish , since we were on the subject of antibiotics.

    Being in the military they issue out antibiotics like candy. Keflex, Penecillin, Amoxicillin, Z-Max, and some of the other stronger ones. Something that is clearly viral will still receive meds that will do nothing to fight the infection itself (that's how I understand it). It is free for us and doctors/medics just put them out there to make their job easier and to process patients more quickly. It's as easy as going to the store and getting Over The Counter drugs.
    It may not be as prevalent outside military life, but many doctors still presribe antibio's for illnesses which will not benefit the patient. Not to discredit people in the medical field, but as everywhere some individuals just don't know how to do their jobs properly, or choose not to for the sake of ease.

    I'm attempting to stay somewhat on topic here, so I'll not get into an agrument of ethics and personal health. 'Nuff said.

    --
    What else can happen when an unstoppable force collides with an immovable object?
  46. the get the facts campaign by Anonymous Coward · · Score: 0

    That is somewhat older inaccurate news now, although popular to keep repeating. The use of antibiotics in feed or as supplements is _much_ lower today than it was in years past. There are a plethora of newish laws that regulate it better, plus it's *very* expensive, plus it is not so effective. Believe me, farmers don't want to use them if at all possible. They are only used as last ditch "save the farm" attempts, it isn't normal day to day in all the animal feed, and they are pretty restricted as to type and dosage, etc. it's a good way to go broke or go to jail if you abuse the system.. On the other hand, OUTSIDE the US, use of antibiotics in animals and highly poisonous sprays (stuff completely banned for ANY use in the USA) on food is very high. Most of south america, asia,and africa have little to no regulations or oversight. Europe and Canada and the US in the west and Oz, NZ and Japan in the east are about the only places that even bother to have any regulations of note and actually try to enforce those regs.

    Inside the US, the most common way that antibiotics and other drugs get into the environment is from humans. Waste water treatment plants do hardly anything to remove those sources. Some of the worst offenders are tranquilizers, and birth control hormones. In the soil, it's anything goes. A lot of places routinely dry human waste treated "sludge" and use it as fertilizer in such places as city parks and golf courses, etc. You get some nice concentrated heavy metals then too, yummy!

    I will not deny that current agricultural practices are a source, but I think they are not the primary source.

  47. Bad News by Anonymous Coward · · Score: 0

    With this info out there, Bush's FDA will immeadiatly announce that all resistance is caused by nature and that we can go back to unrestricted use of anti-biotics. In addition, he will be encouraging the development in China or by Oil companies.

  48. This was on this week's Science Friday by foo12 · · Score: 1

    Ira Flatow (yes, of Newton's Apple fame) covered this on the latest edition of Science Friday. They have the segment available as an MP3. (The whole weekly show is also available as a podcast at feed://www.sciencefriday.com/audio/scifriaudio.xml if you're interested)

  49. Ya know by phred75 · · Score: 0

    The infectious bacteria on this planet are very quickly becoming anti-biotic resistant because humans gulp down anti-biotics for damn well anything (north Americans especially). You go see a doctor and complain about having a bad sore throat, they will probably throw some anti-biotic your way. The ironic part is that anti-biotics actually kill the beneficial flora in your intestinal tract that is used to maintain a strong immune system and kill off bad infectious bugs that infest us in the first place. In alternative medicine thinking, the main steps in combating an infectious bacteria based disease is to use high doses of PRO-BIOTICS (which fortify the bodies flora as well as using silver colloidal which is lethal to germs and bad bacteria while keeping the good bacteria intact. In fact alot of hospitals use it where common anti-biotics fail. There are even natural anti-biotics which are way less taxing on the system such as garlic concentrate, olive leaf and grapefruit seed extract

    Another interesting thing to note is the fact that there are some very powerful bacteria found in the earth that will strongly fortify human flora. These are known as homeostatic soil organisms. This company makes such a product:

    http://www.gardenoflifeusa.com/detail_primal_defen se.shtml/

  50. ShoeAid? by utexaspunk · · Score: 1

    Does this mean we would do well to be offering aid in the form of shoes and perhaps encouraging paved walkways in poorer countries?

  51. "Napalm" antibiotics and yeast infections by ScottBob · · Score: 1

    Sometimes, in difficult to treat cases, doctors will prescribe what my mom always called "Napalm" antibiotics, that is, antibiotics that are so strong that they kill everything, including the "good" bacteria lactobacillus acidophilus in the intestines, and the result? The worst imaginable liquid, dripping, "hershey squirts", "green apple two-step" diarrhea.

    If the good bacteria aren't replenished soon enough, it allows the yeast candida albicans that is also present in the intestines to grow unchecked. Normally the good bacteria crowd out the yeast, but when the bacteria are killed off by antibiotics, there is an overgrowth of the yeast, since most antibiotics don't kill yeast. The overgrowth of yeast releases toxins that damage the intestinal lining, mimicking intestinal conditions such as irritable bowel syndrome, celiac sprue, Crohn's disease, and lactose intolerance, and causing a whole host of other problems such as vaginal yeast infections in women, prostatitis in men, athlete's foot, fingernail and toenail infections, etc. (Go do a web search on "candida overgrowth syndrome" or "candidiasis".)

    The good bacteria acidophilus is the bacteria culture used to make yogurt, and can also be found in probiotic supplements (look in the vitamin and supplement aisle at health food stores). Contrary to the FUD in the article, some bacteria from soil is beneficial, as they are sometimes incorporated into the probiotic supplements to help kill off the yeast overgrowth.

  52. molds in the soils by Colonel+Panic · · Score: 1

    I was thinking the same thing. Molds would be common in soils and molds produce the compounds we use as antibiotics... so why wouldn't there be soil bacteria that are naturally resistant?

    There must be lots of old soils samples around - why not take samples of soils that were taken prior to the antibiotic era (before the 40's or so) and see if they don't get the same result?

  53. Makes sense, I suppose... by jcr · · Score: 1

    Since most of the antibiotics are related to secretions from molds like penicillin, soil bacteria probably encounter them much more than parasitic bacteria in animals would.

    -jcr

    --
    The only title of honor that a tyrant can grant is "Enemy of the State."
  54. Biotoxins often don't leave your body for years.. by aquadivina · · Score: 1

    A lot of soil contains some particularly nasty molds that generate serious biotoxins. Many mycotoxins, Lyme disease, some aquatic microorganisms, and several other biotoxin diseases have similar effects in the body.. especially in people who have certain HLA-DR types. Those people don't eliminate these toxins and, as I have heard, they become locked in the body by being trapped in a loop between the liver, bile salts, and small intestine.. They can cause serious damage to your health. If you have mold-related illness, Lyme, or any of these other diseases you may not even know it, but they could be making you seriously ill (this is the situation I was in..) I found out that a drug called cholestyramine helped a lot.. literally sucking the toxins out of this loop that I described earlier. It made a huge difference for me. There is a lot of info on this at moldwarriors.com and chronicneurotoxins.com . Mold toxicity is a serious (and politically controversial.. watch people flame me on this!) problem and so is Lyme disease.. this approach seems to be a real breakthrough.. so save this info if you know someone who needs it.

  55. There is a very good reason for this... by extensis · · Score: 1

    There is a very good reason that the a large number of soil organisms are resistant to antibiotics.
    All antibiotics used today have originated or have been derived from natural sources. Don't think for a minute that resistance to penicillin came about since humans started using it, oh no, bacteria have been protecting themselves against natural antibiotics for eons. Humans did not invent antibiotics nature/God/life invented them. So finding resistance in nature should not be suprising.
    Soil bacteria should especially be used to defending themselves against antibiotics because they make antibiotics themselves. The majority of all antibiotics used to day have been developed from products made by the family of bacteria called Actinomyces (spelling?), especially from the genus Streptomyces. Drugs like Streptomycin, and penicillin are naturally found in soil, made by these bacteria, and these bacteria certainly don't kill themselves, their resistant to their own offences.
    Don't be too weary of resistant soil germs, most of them are harmless (except anthrax and a few), the most dangerous bacteria are probably living on your face right now (Staphylococcus aureus, Pseudomons aeriginosa)..

    --
    Mike Jones-{ Genetic Engineer, in Training }-
  56. Daily advice by Stan+Vassilev · · Score: 1

    The advice for today: don't soil yourself.

  57. bacteriophages by Anonymous Coward · · Score: 0
  58. Can humans make it? 3 ways to escape extinction by Anonymous Coward · · Score: 0

    Can humans make it?

    With the disgusting abuse of anti-biotics in the US (people get anti-biotics for colds all the time... what for? Colds are viruses???!), soon everything will be immune to anti-biotics. Then we will certainly be back to dealing with bacteria the old fashioned way: survive naturally or become extinct.

    Before humans came on the scene to kill off species for no good reason, there were 3 things you could count on to escape extinction (none of which do humans have):

    1. reproduce so quickly and in such vast numbers that odds are very good some offspring will survive any big changes in the environment. e.g. various insects, which have been around forever. Like cockroaches becoming immune to many poisons after a few generations.

    Humans breed like viruses in a way, but much much much slower. We don't qualify here.

    2. be really tough and immune to a lot of germs. e.g. the croc family have natural anti-bodies in their blood that kick the majority of infection's butts, and they've been around since the dinosaur time.

    Humans tough? No, but our shelters help. Immune to a lot? I don't think so. I think we're getting less tough and less immune to things by overworking and living in cities.

    3. live in a isolated place where the environment rarely changes. e.g. the coelacanth, a fish at the bottom of the ocean that were around since before the dinosaurs. Even if continents move, the sun is blocked by ash, tropical rain forests produce a thousand venomous snakes, spiders, and bugs... you will still be in the "safe" environment at the bottom of the ocean.

    Shelters protect us from a little rain and snow, but when the meterorite hits, we'll be toast. One day we may get a new super disease that pops up and spreads all over the world via airliners... we're not isolated enough by any strech of the imagination.
    ---
    So, can humans make it? I dunno... we seem to be getting really good at screwing up the world lately. Pretty soon i am afraid we'll screw it up enough to screw ourselves over.

  59. Soil-based bacterial already in use as probiotics by Anonymous Coward · · Score: 0

    HSOs (Homeostatic soil bacteria) are already in use as a form of probiotics, and widely advocated by individuals such as Jordan Rubin (who had a very severe form a Crohn's himself). There are many suffers of diseases such as Crohn's and IBS (Irritable Bowel Syndrome) who seem to have been helped by them, but more research is necessary.

    See:

    http://www.findarticles.com/p/articles/mi_m0ISW/is _2002_Nov/ai_93736412

  60. Soil is a battleground. by tempest69 · · Score: 1
    The amount of "antibiotic pollution" is insignifigant compared to the naturally produced antibiotics in the soil. Microbes that live in the soil can get an advantage by producing antimicrobials. So the bugs just make poisons and learn defenses, and if the threat is gone they lose some resistance to be a faster growing bug. There are millions of bacteria in a handfull of soil, And there is a bunch of soil on the planet, so even if we dumped 10 million pounds of antibiotics per year into the environment it would be pretty insignificant.

    Storm

    1. Re:Soil is a battleground. by lamp540 · · Score: 1

      you're an idiot.

  61. Other approaches to solving the problem.. by nanobuggs · · Score: 1

    ..of antimicrobial drug resistance fall into three main types.(from genomebiology.com) First, simply develop new drugs. The post-genomic era has led to the discovery of a whole host of essential genes in bacteria whose products might represent targets for novel antimicrobial drugs. The second approach is to stop using a particular drug and reintroduce it when resistance levels have fallen. This idea derives from the assumption that resistance mechanisms come with a fitness cost and that in the absence of selection, resistant strains will be out-competed by sensitive strains. The third strategy is to learn more about the resistance mechanisms themselves. This area of research is focused on degradative enzymes and efflux pumps. see http://genomebiology.com/2005/6/13/243

  62. What about nude mud bathers? by Anonymous Coward · · Score: 0

    These people go nude, out in the middle of nowhere, bathing in a hole dug with water and a shovel.
    They take a truck with a 55 gal barrel or some other tank of water out to nowhere, get naked and start digging and then get in and get totally soaked, even the face.
    Has anyone done a study on these people?
    Please include video with your study and include the wash off part, thanks :)

  63. Dirt is Healthy by Dr_Barnowl · · Score: 1

    You should get a bit of dirt in your life.

    Anecdotal evidence suggests that excessive cleanliness can contribute to the development of autoimmune diseases, like Crohns and asthma.

    The theory being that your immune system has historically had a lot to do.... and when confronted by the microbial desert presented by modern living in a bleached-up house, gets a bit bored and starts vandalising the house.....

  64. I cant believe we have overlooked the need to... by riprjak · · Score: 1

    ...welcome our new Superbug overlords!

    I, for one, Welcome them :)