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New Findings Confirm Darwin's Theory — Evolution Not Random

ScienceDaily is reporting a team of biologists has demonstrated that evolution is a deterministic process, rather than a random selection as some competing theories suggested. "When the researchers measured changes in 40 defined characteristics of the nematodes' sexual organs (including cell division patterns and the formation of specific cells), they found that most were uniform in direction, with the main mechanism for the development favoring a natural selection of successful traits, the researchers said."

386 comments

  1. Ah, but... by susano_otter · · Score: 5, Funny

    the main mechanism for the development favoring a natural selection of successful traits

    Ah, but did this deterministic development mechanism evolve deterministically or randomly?
    --

    Any sufficiently well-organized community is indistinguishable from Government.

    1. Re:Ah, but... by KublaiKhan · · Score: 3, Insightful

      Is it 'deterministic' or 'random' that a positively charged object is attracted to a negatively charged object, or is it merely a consequence of the way things are?

      --
      In Xanadu did Kubla Khan
      A stately pleasure dome decree
    2. Re:Ah, but... by Apocryphos · · Score: 1

      In case that's not a joke: Given the properties of life and the limitations of mutations per generation, how could species evolve any other way? So really your question is: Are the properties of life deterministic or random? It seems obvious that they are deterministic (on our planet anyway) in the same way evolution is.

    3. Re:Ah, but... by phatvw · · Score: 2, Informative

      Deterministic selection might be obvious. But can anyone offer an explanation how the very first instance of a successful trait comes about?
      I have faith that the first instance of a long neck was due to one or more coincident random mutations.

    4. Re:Ah, but... by KublaiKhan · · Score: 5, Insightful

      This says nothing about the way in which a trait arise--merely that the selection process that determines which traits are likely to be passed on is not random.

      Also, there's no reason to have faith in this. Leave faith to the religious folks--these are facts, which are true whether or not you 'believe' them.

      --
      In Xanadu did Kubla Khan
      A stately pleasure dome decree
    5. Re:Ah, but... by Mantaar · · Score: 1, Flamebait

      Trying to argument by calling things "merely the way they are" is what I hate my Christian enemies for.

      --
      I'm an infovore...
    6. Re:Ah, but... by mike2R · · Score: 1

      I don't think anyone is arguing that mutations are (or at least can be for the theory to hold) non-random - TFA only talking about selection. IOW nothing to see here... move along.

      --
      This sig all sigs devours
    7. Re:Ah, but... by KublaiKhan · · Score: 3, Insightful

      It is an unfortunate man who counts another as an enemy--the more you hate 'em, the more you risk becoming like 'em.

      Referring to scientific facts in terms of 'faith' and 'belief' is rather an unfortunate choice of terminology. There's no need to believe in facts. There's no need to 'have faith' in random mutations--you can prove to yourself that such things happen, and thus have no need for 'faith'.

      --
      In Xanadu did Kubla Khan
      A stately pleasure dome decree
    8. Re:Ah, but... by WgT2 · · Score: 1

      ...my Christian enemies...
      Does that mean you have 'Christian friends'?
    9. Re:Ah, but... by JackHoffman · · Score: 1

      It is random, but the result is not evenly distributed.

    10. Re:Ah, but... by shimage · · Score: 4, Insightful

      Two points:

      1. While it's good to verify things, you do realize that this proves nothing, right? It is merely in line with the one theory that we have for this sort of thing. It doesn't go anywhere near proving it. To prove that evolutionary selection is deterministic, you'd have to show that it was true for all cases, and that's a bit difficult. What this experiment shows is that for the species tested, traits considered, over the time analyzed, nothing abnormal was observed.
      2. There is no "competing theory", just Darwin's. There are those of us that believed that it the selection of traits was deterministic, and then there are ... creationists. Those that are in between don't make up a significant population in the scientific community. Also note that this study is irrelevant for the evolution/ID debate, since this is supposed to determine how evolution goes about, not whether it goes about.
      3. While I don't think that this experiment wasn't worth doing, I don't think it's news. It's like going out to measure the mass of a photon and discovering that it's less than you can measure (yes, I know this has been done; it wasn't very exciting). It doesn't break anything we thought was fine, and doesn't prove anything we didn't already know: it simply puts limits on how wrong our theory can possibly be.

    11. Re:Ah, but... by WgT2 · · Score: 4, Funny

      Is the following a fact or faith?

      The Sun will rise tomorrow (whether over clouds or otherwise).
      What say ye?

      Hint: ISATRAP

    12. Re:Ah, but... by Crazyscottie · · Score: 1

      "Facts and truth really don't have much to do with each other." --William Faulkner

      --
      Just because it can't be explained doesn't mean it isn't true. Science fits into reality... not the other way around.
    13. Re:Ah, but... by kemushi88 · · Score: 5, Funny

      Facts have a known liberal bias.

    14. Re:Ah, but... by phatvw · · Score: 1

      My statement about faith in randomness has absolutely nothing to do with religion. I was actually trying to make a joke but it seems to have backfired. Does faith=troll on slashdot?

    15. Re:Ah, but... by Adambomb · · Score: 5, Insightful

      This is why I would like to have clarified why people seem to think that the concept of Creationism is even at odds with Evolution.

      Personally, I would find it much less insulting as a deity if people realized I was an absolutely incredible systems programmer able to start a ball rolling with some precursor components and have all of earths current life unfold from them as planned. It would kind of belittle the effort to say He just snapped his fingers.

      I hear the rebuttal constantly that the words of mankind are unable to contain the meanings God would be trying to impart on the writers, and this type of complexity would be EXACTLY the kind of thing mankind would be unable to even conceptualize millennia ago.

      Creationism and Evolution are not mutually exclusive. The roots of creationism are simply unable to be tested or verified by humanity currently so it remains a leap of faith to believe that God designed the layout of dominos. We can't even say if there was a START to the universe, or whether it is some bizarre infinite system, or a finite-yet-recursive system or what.

      For the die hard ultra-fundamentalist AS WELL AS the hardcore ultra-atheistic, keep in mind that NOTHING can be known to be 100% accurate, maybe a bunch of nines of significance based on what we know but never 100%. Even the probability we determine based on what we know would be in the same boat (IE: see Newtonian mechanics, almost correct, 'works' depending on frame of reference).

      If we could, humanity would have no need for faith, as everything would simply be. Seeing as that would leave even less room in existence for free will, I'm definitely glad things are not that way (despite some things done in the name of faith or in the name of science).

      DISCLAIMER: I'm still one who prefers the random swerving to being a gear in a deterministic system, but that doesnt mean what i'd like the model of existence to look like is correct.

      --
      Ice Cream has no bones.
    16. Re:Ah, but... by Anonymous Coward · · Score: 0
      When will those religious wackos learn? Science is perfect, Science always gets it right.
      And since these are Facts, it's not a matter of faith. Facts are 100% true. Science has never turned out to be wrong, you could even call It infallible.
      And if the religious folks question our facts, they're morons. True, we assume the article, author, and the scientist who tested this are all correct and that the data has been interpreted properly, but that's acceptable- they're research papers. It's completely different from believing in a book like those damn religious nuts.

      Religious folks out there- listen up.
      • You say God is never wrong; you mean Science is never wrong.
      • You believe your Ministers and Priests are 100% correct; but it's Scientists who are 100% correct.
      • You believe a collection of papers made into a book; We believe research papers. Big difference, since we're right and you're not.

      Next thing you know, those morons will try to say we're just as radical as they are.
      That we're not completely different tactically, albeit on opposite sides of the issue.
      Then they'll spout some garbage about letting them live with their own beliefs! That they have the freedom to believe their religion if they want to- HA!
      Poor fools, when will they realize we're helping them? That we only ridicule them and force science on them(I mean 'educate,' they're the ones who force their beliefs by quoting a book to us) because it's in their best interests.
      If only they were mature like us, and didn't try to act superior and perfect.
      --
      And now I get modded down. But you get my point.
    17. Re:Ah, but... by marcello_dl · · Score: 1

      Quite difficult to define relations on the Christian side, when love thy enemy is a rule with somewhat high priority. About the unbelievers' rules, well, can't say.

      --
      ---- MISSING MISCELLANEOUS DATA SEGMENT --- [sigdash] trolololol
    18. Re:Ah, but... by UnknownSoldier · · Score: 4, Interesting

      Yeah YHBT HAND ...

      "If you thought that science was certain - well, that is just an error on your part."
        Richard Feynman

      "Science without religion is lame, religion without science is blind."
          -- Albert Einstein

    19. Re:Ah, but... by Mantaar · · Score: 1

      Yes it does. I must admit that my original comment was badly worded, but I mean it that way - not all Christians are complete retards, and I know some I really admire, but some of them, I know no better word than 'enemy' for them.

      --
      I'm an infovore...
    20. Re:Ah, but... by jgarra23 · · Score: 2, Insightful


      Trying to argument by calling things "merely the way they are" is what I hate my Christian enemies for.


      All science comes from the idea that one does not know and uses a sound method to determine things. Until you know the process involved it is "the way things are". Things fell to the ground for centuries that's the way it was until we learned the force of gravity.

      I don't know of any religion that accepts "that's the way things are", they all try to say "no it's not! This is the result of our doing something!!"

      Try telling a Pentacostal that our existence is "just the way things are, no more no less" and let me know what kind of answer you get back.

      BTW, I couldn't agree with you more on what infuriates me about them :)

    21. Re:Ah, but... by Mantaar · · Score: 3, Insightful

      It is an unfortunate man who counts another as an enemy--the more you hate 'em, the more you risk becoming like 'em. There's a German Proverb that goes:
      Die größten Kritiker der Elche waren früher selber welche
      translates to: the greatest critics of the moose have been moose themselves in the past... (rhymes in German and is thus funny, sounds ridiculous in my translation)

      I hope you understand my point. Been there, done that - not a hard liner, but a naïve child, ready to believe in something sound - then I turned away in disgust as my mind started liberating itself from all that Christian... propaganda?

      I don't think I have a chance of becoming religious once again - and I think that you misunderstood my usage of 'enemy'. I don't hate them, but I must oppose them.
      --
      I'm an infovore...
    22. Re:Ah, but... by Anonymous Coward · · Score: 3, Insightful

      Well... From a scientist who is also very religious...

      If you think that science deals in facts, you're mistaken. Science is more a process of coming up with explanations for the observations that we have. For example, we see something, we come up with a theory and then set out to "prove" the theory correct. Unfortunately, we find historically, that the scientific proof of things is almost always flawed, as it was with newtonian physics, but is frequently good enough to get by. There are all sorts of stuff that we're able to build with the flawed scientific information that we gather.

      Again, historically, we have shown that as humans, we aren't very good at understanding "fact" through science. We're much better at understanding approximations that are good enough for what we're trying to accomplish at that time. As we come up with different needs or as someone looks a bit further than their colleagues, we come up with better approximations. I see most of science as an exercise of faith quite as much as religion.

      As was noted at a medical school. "Half of what we're going to teach you about medical science is false. We're just not sure which half yet."

      I agree that facts are true regardless of what you believe. I just don't think that science is all about fact.

    23. Re:Ah, but... by yali · · Score: 3, Informative

      Creationism and Evolution are not mutually exclusive.

      Yes they are, at least for the standard dictionary definition of creationism:

      creationism:
      1. the doctrine that matter and all things were created, substantially as they now exist, by an omnipotent Creator, and not gradually evolved or developed.
      2. the doctrine that the true story of the creation of the universe is as it is recounted in the Bible, esp. in the first chapter of Genesis.

      Keep in mind, "Creationism" != "Religious faith". There are plenty of people who believe in God and who accept the scientific theory of evolution. But they are not creationists.

    24. Re:Ah, but... by Anonymous Coward · · Score: 0

      "If you thought that science was certain - well, that is just an error on your part."
            Richard Feynman

      Very true. Feynman perfectly knew science is true, while not certain (that's why we must *research* while religious zealots don't need it).

      "Science without religion is lame, religion without science is blind."

      He always was a romantic soul.

    25. Re:Ah, but... by Feanturi · · Score: 1

      It's faith because even though it has already happened in the past eleventy-billion times and everybody saw it, we still haven't seen it come up tomorrow, where there could possibly be some unforseen calamity happening that will prevent it. But I'm not going to lose any sleep over worrying about it.

      When tomorrow comes and the sun actually rises, then it'll be fact.

    26. Re:Ah, but... by susano_otter · · Score: 4, Interesting

      That's a bizarre definition of "creationism". It's been my experience, after decades of interacting with large numbers of creationists in various contexts, that the "creation-is-incompatible-with-evolution" types are but one small faction among many.

      You may want to reconsider reference.com as a reliable source of unbiased information on controversial subjects.

      --

      Any sufficiently well-organized community is indistinguishable from Government.

    27. Re:Ah, but... by Hotawa+Hawk-eye · · Score: 4, Insightful

      Ask me again tomorrow afternoon.

    28. Re:Ah, but... by bwalling · · Score: 2, Insightful

      these are facts, which are true whether or not you 'believe' them.
      Don't misrepresent what science is. Science is always changing its mind based on new findings. That's what it is supposed to do. This is our current understanding. It may be the true behavior of nature; it may only be the best explanation for what we currently know and we'll later discover something that provides a much better explanation. You shouldn't call something like this 'true' - you should simply say that it is the current explanation. There will always be more information to uncover - do you really think science will reach some kind of end?
    29. Re:Ah, but... by Adambomb · · Score: 1

      Really? I always thought that to be considered Creationist one simply had to believe that God engineered all that is, regardless of how. I assumed that to be logical enough to never have bothered to look into it.

      Well now I understand why it is listed as mutually exclusive, but also understand even less about how that specific doctrine is to be defended.

      --
      Ice Cream has no bones.
    30. Re:Ah, but... by Anonymous Coward · · Score: 1, Funny

      The concept of a geocentric universe makes you sexually excited doesnt it!

      SIR YES SIR!

      You want to make 15th century mathematician Johannes Kepler your bitch DONT YOU!

      SIR YES SIR!

    31. Re:Ah, but... by mikey1134 · · Score: 1

      sorry, just replying to purge the flamebait mod i accidentally gave you...

      --
      <gir voice> I love this sig... </gir voice>
    32. Re:Ah, but... by Anonymous Coward · · Score: 0

      To prove that evolutionary selection is deterministic, you'd have to show that it was true for all cases, and that's a bit difficult.

      No. To prove that evolutionary selection is deterministic, you only need to demonstrate it mathematically. Notice that genetic algorithms, from the field of evolutionary algorithms, are very straightforward mathematically, and show with mathematical rigor that evolutionary selection IS deterministic and directed.

      You don't even need to conduct a single experiment to show that this is a fact. All you need to verify experimentally is that genes replicate, and that occasionally genes undergo random mutation. Given these two observations, it is then simple mathematical fact that directed evolution will occur.
    33. Re:Ah, but... by Anonymous Coward · · Score: 0

      ID is about HOW Evolution Occurs. It occurs Intelligently. ID says Evolution's theory that it is entirely nature's luck is incorrect. Evolution says that no "creator" is involved with the process. Pure Creationism says ID and Evolution are wrong because things were created as they are now by an omnipotent being.

      ID and Evolution do not have to be mutually exclusive. It just happens that a lot of people that love ID are Creationists and try to use it to say Evolution is wrong entirely.

      The research mentioned in the article indicates that there might be something that is intelligently determining how things come out, which supports ID. Oops. Somehow, I doubt the ID people will realize that.

    34. Re:Ah, but... by jawtheshark · · Score: 2, Insightful

      I know I'm playing the devils advocate here.... (being not very religious, I've been baptised Catholic, and I did marry before Church. Mainly because of my wife though and she really didn't have religious things in mind... anyway... offtopic)

      I don't know of any religion that accepts "that's the way things are", they all try to say "no it's not! This is the result of our doing something!!"

      Actually, they all accept the mantra "that's the way things are". They just accept the view from thousands years ago, where there wasn't a real explanation and someone made up a fairy tale. For them that "is the way things are". Knowledge, doesn't change, nor evolve for them. It just "is". Science on the other hand, evolves, corrects itself, gets better. They are unable to, because of the mantra "that's the way things are". Science works following the mantra "Now, that's odd... Why in the world would it behave like this? I need to look deeper into that".

      --
      Ahhh...the great dumpster continuum. Many a free computer will be found there. -- sowth (748135)
    35. Re:Ah, but... by nil0lab · · Score: 1


      >...
      > There is no "competing theory", just Darwin's. There are those of us that believed that it the selection of traits was deterministic, and then there are ... creationists.
      >...


      Well, actually, the prevailing view is that mutation is random (i.e. not deterministic) and that where there is no selection pressure there is random drift of traits among populations (especially isolated ones) until selection pressure changes (catastrophe, overpopulation, new kinds of competitors or predators).

    36. Re:Ah, but... by Anonymous Coward · · Score: 1, Funny

      NOBODY EXPECTS THE SPANISH INQUISITION!!

      Two points:

            1. While it's good to verify things, you do realize that this proves nothing, right? It is merely in line with the one theory that we have for this sort of thing. It doesn't go anywhere near proving it. To prove that evolutionary selection is deterministic, you'd have to show that it was true for all cases, and that's a bit difficult. What this experiment shows is that for the species tested, traits considered, over the time analyzed, nothing abnormal was observed.
            2. There is no "competing theory", just Darwin's. There are those of us that believed that it the selection of traits was deterministic, and then there are ... creationists. Those that are in between don't make up a significant population in the scientific community. Also note that this study is irrelevant for the evolution/ID debate, since this is supposed to determine how evolution goes about, not whether it goes about.
      3. While I don't think that this experiment wasn't worth...

      WAIT, I'LL COME IN AGAIN

      NOBODY EXPECTS THE SPANISH INQUISITION!!

      Among our THREE points are:

            1. While it's good to verify things, you do realize that this proves nothing, right? It is merely in line with the one theory that we have for this sort of thing. It doesn't go anywhere near proving it. To prove that evolutionary selection is deterministic, you'd have to show that it was true for all cases, and that's a bit difficult. What this experiment shows is that for the species tested, traits considered, over the time analyzed, nothing abnormal was observed.
            2. There is no "competing theory", just Darwin's. There are those of us that believed that it the selection of traits was deterministic, and then there are ... creationists. Those that are in between don't make up a significant population in the scientific community. Also note that this study is irrelevant for the evolution/ID debate, since this is supposed to determine how evolution goes about, not whether it goes about.
            3. While I don't think that this experiment wasn't worth doing, I don't think it's news. It's like going out to measure the mass of a photon and discovering that it's less than you can measure (yes, I know this has been done; it wasn't very exciting). It doesn't break anything we thought was fine, and doesn't prove anything we didn't already know: it simply puts limits on how wrong our theory can possibly be.

    37. Re:Ah, but... by kayditty · · Score: 0

      I'd say it's faith, since there's no past evidence of the sun ever "rising" anywhere. was that the trap?

      if we reword the question so it has to be answered the way intended, though, then I think it turns out to be an issue of semantics. I wouldn't call it faith, but I'm not sure I'd call it a fact either, since everyone knows you can't 'prove' anything. but I would say it is very, very, very probable, to the point that we can accept it as fact for all intents and purposes.

    38. Re:Ah, but... by lgw · · Score: 3, Informative

      If you think that science deals in facts, you're mistaken. Science is more a process of coming up with explanations for the observations that we have. For example, we see something, we come up with a theory and then set out to "prove" the theory correct. Unfortunately, we find historically, that the scientific proof of things is almost always flawed, as it was with newtonian physics, but is frequently good enough to get by. There is a fundamental misunderstanding here. Science never proves that a theory is "correct" -- theories never become facts -- science instead proves that a theory has useful predictive power. Newton's laws of motion remain "proven" on this basis: the engineering calculations needed to put a man on the moon, for example, were done with deliberate disregard for relativity, for Newton's laws had just as much useful predictive power after Einstein as before.

      A hypothesis doesn't get called a theory until it has demonstrated substantial predictive power, and so is almost never found to be "incorrect" later. Instead conditions are discovered under which the old theory doesn't make useful predictions, and the new theory is "more general", or accurate to more decimal places, etc.
      --
      Socialism: a lie told by totalitarians and believed by fools.
    39. Re:Ah, but... by jonux · · Score: 1

      The Sun will rise tomorrow (whether over clouds or otherwise).


      So far it is merely a statement, grounded on faith in experience. Tomorrow it will likely be proven a fact.

    40. Re:Ah, but... by Gandalf_Greyhame · · Score: 2, Insightful

      Is the following a fact or faith? The Sun will rise tomorrow (whether over clouds or otherwise). What say ye?
      Neither, as the sun is stationary and therefore unable to rise. Perhaps the correct question to ask would be "As the Earth continues in it's daily rotation, will there be a sun in the sky tomorrow"

      Now, if we think about this logically, if the sun was not in existence, the Earth would stop moving around the sun, and therefore there would be no tomorrow.
      Therefore I have decided, using logic, that without a tomorrow, there is no sun. Therefore it is a fact that the sun will rise tomorrow.
      --
      I am not stubborn. I am right!
    41. Re:Ah, but... by cretog8 · · Score: 1

      This is why I would like to have clarified why people seem to think that the concept of Creationism is even at odds with Evolution.

      Creationism isn't necessarily at odds with "evolution". It is necessarily at odds with evolution by natural selection. Natural selection means that... it's natural, that there isn't an intelligent decision maker with a goal in mind. For instance, if I was a trick-shot expert in pool and I did something involving three banks and sunk four balls, that would show that I was a trick-shot expert who set things up awesome in the beginning. Likewise, the idea that a deity set things up at the dawn of time knowing that it would work out via super-complex processes to have humans and mosquitoes... that's just an odd form of creationism.

      In fact, it has more in common with young-earth creationism than with the theory of natural selection. It implies that a god had some goal in mind, and took steps needed to achieve it, but went to great lengths to disguise that fact. Some theories have a god laying down fossils to be tricky, this story has a god using smoke and mirrors to make it look like there is no god. There's certainly some appeal to the idea of a deity sniggering in the sky, laughing at how stupid we are, but whatever its aesthetic appeal, I don't find it very convincing.

    42. Re:Ah, but... by Anonymous Coward · · Score: 5, Informative

      Just to be clear, so we don't assume any misconceptions here about Einstein and religion:

      I believe in Spinoza's God, Who reveals Himself in the lawful harmony of the world, not in a God Who concerns Himself with the fate and the doings of mankind. -- Einstein

      It was, of course, a lie what you read about my religious convictions, a lie which is being systematically repeated. I do not believe in a personal God and I have never denied this but have expressed it clearly. If something is in me which can be called religious then it is the unbounded admiration for the structure of the world so far as our science can reveal it. -- Einstein

    43. Re:Ah, but... by rucs_hack · · Score: 1

      ah yes, but will the sun be lit up on the side we can't see?

    44. Re:Ah, but... by aminorex · · Score: 0

      Fundamentally, it is inconsistent to believe
          (1) your ideation is performed by a material process implemented in your brain
          (2) your brain is the result of an undirected process
          (3) your ideation is able to accurately represent physical reality
      simultaneously. You can have any two, but not all three at once.

      If your cognitive processes are the result of an undirected physical process, then I have no more reason to believe anything you say than I do to take the advice of a moose or a lichen or an asteroid. In fact, according to the metaphysical theory of scientific materialism, incorporating the neo-darwinian synthesis model of evolution, it is essentially impossible for you to reason accurately about reality, since the ability to do so is not an adaptive trait, as GA experiments have shown.

      --
      -I like my women like I like my tea: green-
    45. Re:Ah, but... by Anonymous Coward · · Score: 1, Interesting

      >>I don't know of any religion that accepts "that's the way things are", they all try to say "no it's not! This is the result of our doing something!!"

      There do exist religions and religious texts that take an open-minded view on understanding the processes of creation. I recommend reading the Hymn of Creation from the Rig-Veda. There are numerous translations available online. I quote the following from a translation available at: http://www.princeton.edu/~howarth/573/rig-veda.html

      "Who really knows, and who can swear,
      How creation came, when or where!
      Even gods came after creation's day,
      Who really knows, who can truly say
      When and how did creation start?
      Did He do it? Or did He not?
      Only He, up there, knows, maybe;
      Or perhaps, not even He."

    46. Re:Ah, but... by marcello_dl · · Score: 1

      IIRC in the Old Testament punishment comes from God in quite immediate and cruel ways. And reward is the Abraham kind: wealth and sons.
      But in the new testament?
      "The owner's servants came to him and said, 'Sir, didn't you sow good seed in your field? Where then did the weeds come from?'
      " 'An enemy did this,' he replied.
      "The servants asked him, 'Do you want us to go and pull them up?'
      " 'No,' he answered, 'because while you are pulling the weeds, you may root up the wheat with them.
      Let both grow together until the harvest."

      Until the harvest. So I'd be more careful before invoking God's wrath as a justification for bad things happening to some people.

      Not that it withstands a basic reductio ad hitlerum anyway :)

      --
      ---- MISSING MISCELLANEOUS DATA SEGMENT --- [sigdash] trolololol
    47. Re:Ah, but... by OakDragon · · Score: 1

      In my experience, liberals have always worked hard to counter facts. It would seem strange to consider facts having a liberal bias.

    48. Re:Ah, but... by cc-rider-Texas · · Score: 1

      Oh God, yes.

      --
      If you give a liberal an enema, he'll turn transparent.
    49. Re:Ah, but... by aminorex · · Score: 1

      More like the illusion of sound method. There is no such thing as sound method, in truth. The gullible credulity of positivism is no less than that of shamanism, which is at least empirical. In practice, we observe socially accepted practices within disparate intercommunicating communities. When you try to communicate between these islands, its pretty rare for the norms to port well between environments. The result is typically a failure to communicate. It's not because sociologists or voodoo priestesses are stupid or insane or inferior. It's because they live in a different world, use a different language, and have different experiences.

      --
      -I like my women like I like my tea: green-
    50. Re:Ah, but... by Dun+Malg · · Score: 3, Informative

      ID is about HOW Evolution Occurs. It occurs Intelligently. ID says Evolution's theory that it is entirely nature's luck is incorrect. No, "Intelligent Design" is a way of claiming the development of the species is/was directed by God without invoking the 'G' word. It still ascribes the development to an external intelligence which designed the system from scratch. Organisms self-selecting beneficial genes is not what they're talking about when they say "Intelligent Design".
      --
      If a job's not worth doing, it's not worth doing right.
    51. Re:Ah, but... by Cpt_Kirks · · Score: 1

      Here are some more wackos to put on your enemies list:

          http://209.85.165.104/search?q=cache:http%3A//www.fstdt.com/fundies/top100.aspx%3Farchive%3D1

    52. Re:Ah, but... by Adambomb · · Score: 1

      It is necessarily at odds with evolution by natural selection. Natural selection means that... it's natural, that there isn't an intelligent decision maker with a goal in mind. I do not know about that definition, the only difference I see between the concepts of natural and the supernatural is simply whether or not we've come up with an explanation for something or not. This just happens to be a case where the current somewhat-accepted "natural" explanation is contested.

      The worst thing about discussing these kinds of details over the internet is that one rarely has the chance to correct details being taken out of context. I'm not entirely sure what you think I was trying to say. I may have put it better months back, despite typo-ing accurate =)
      --
      Ice Cream has no bones.
    53. Re:Ah, but... by Dun+Malg · · Score: 4, Insightful

      Really? I always thought that to be considered Creationist one simply had to believe that God engineered all that is, regardless of how. When people talk about "creationists", they generally mean the ones that believe the world is a few thousand years old, that man and monkey are not related (why, the very idea!), and/or any of the many scientifically laughable fairy tales found in old religious fairy tale texts. Those kinds are bad not because they believe in some Skydaddy, but because they actively refuse to acknowledge scientific fact. It's an issue of willful ignorance. I consider myself fairly rational. If I personally witness Jesus his bad ol' self coming down right in front of me, walking on water, and then hanging out with me all day to explain why Born-Again Christianity is the TRUTH, I'd very much be forced to consider the possibility that such might be the case. Conversely, the Creationist Nutter faction refuses to see what's before their very eyes, instead clinging to some internal definition of TRUTH that increasingly conflicts with observable reality.

      For the "creationists" who believe God coded up the source for the universe in one marathon 6-day hacking spree and then typed "root#make universe" which set off the Big Bang, well, where's the point of argument? The lesser "why" of the mechanics is pure science, and the greater "Why" of the motivation for making it that way is pure abstract philosophy. The two never conflict, or even really overlap.
      --
      If a job's not worth doing, it's not worth doing right.
    54. Re:Ah, but... by repapetilto · · Score: 1

      Really think about how little that 3rd point comes into play during your everyday life. You don't find yourself walking into walls or treating a shower knob as if its attached to a door do you? Ultimately yes everything we perceive is subjective and subject to faulty processing but for the most part our experience of the "real world" seems to be surprisingly accurate. This is the basic evidence that people investigating the world around them (read:scientists,researchers,whatever) base their reasoning on. Of course its important to acknowledge our shortcomings as biological beings each subject to limitations, but then when many people agree on experiencing/observing the same thing it seems even more true (even that tendency is ingrained, look at fashion. Just don't throw the baby out with the bathwater, I mean individual experiences and comparing others to our own is all we have. We may as well use it.

      Change the last point to read "perfectly represent physical reality" and maybe you'd be talking sense. Still I don't see the point in acting like you disregard your experience of reality as useless when if you've lived long enough to be able to type into slashdot it has obviously worked out pretty well for you.

    55. Re:Ah, but... by superflyguy · · Score: 1

      There could be a sun without a tomorrow, if, say, the earth disappeared. Please refrain from arguing from the converse. It is possible that there will be a tomorrow without the sun rising. First of all, there will probably be a tomorrow without the sun rising if you're close enough to either pole. Second, "tomorrow" is not generally considered to start at whatever time coincides exactly with sunrise. Therefore, there would be time between the start of tomorrow and sunrise, during which the sun could theoretically disappear, leaving us with a tomorrow without a sunrise. Even if we were to see the sun begin to rise, it could have vanished up to eight minutes prior. 'The sun will rise' doesn't even imply that 'the sun will rise tomorrow' by itself, because that sunrise could take place later today, then the sun could vanish before tomorrow. Despite the fact that your analysis was almost completely invalid, I'd like to propose that you got the answer right. It's possible that the sun will not rise tomorrow, but that possibility does not mean that it is not a fact that the sun will rise tomorrow. It's either a fact that the sun will rise tomorrow or it's a fact that the sun will not rise tomorrow (or it could be a fact that that the sun could partially rise.) That we have faith in one particular possible fact does not mean it's not a fact. If it did, that would imply that anything we have faith in is false. People have had faith that when they dropped something it would fall for a long time, and it was fact that when they dropped it it did fall.

    56. Re:Ah, but... by deKernel · · Score: 0

      Wow, I guess all I can say is that I feel sorry for you if you truly mean the word 'enemy'. You do realize that you pretty much fall into the same category as your 'enemy' but just on a different side of the fence.

    57. Re:Ah, but... by mikael · · Score: 1

      Perhaps the DNA of all creatures has the ability to determine which genes are used the most often in cells, then modify the DNA in reproductive cells in some way (maybe the "junk DNA"). If muscles were damaged more often due to usage, the next generations DNA would be reprogrammed to create more muscle tissue. If bones were damaged more often due to strain, the next generations DNA would have stronger bones, and so on.

      --
      Vintage computer adverts: http://www.vintageadbrowser.com/computers-and-software-ads
    58. Re:Ah, but... by repapetilto · · Score: 1

      Actually I'm interested.. which facts?

    59. Re:Ah, but... by roadkill-maker · · Score: 1

      If your cognitive processes are the result of an undirected physical process, then I have no more reason to believe anything you say than I do to take the advice of a moose or a lichen or an asteroid. A priori, your absolutely correct. Thats why we try all 3 and find which one gets us what we want, which is the information that can better help us make accurate predictions.

      In fact, according to the metaphysical theory of scientific materialism Haha, the metaphysical theory of scientific materialism... sounds useful

      it is essentially impossible for you to reason accurately about reality, since the ability to do so is not an adaptive trait, as GA experiments have shown. Ok, so your claiming that a creatures ability to make accurate predictions about the world around it won't help it survive? That sounds real reasonable
    60. Re:Ah, but... by repapetilto · · Score: 1

      If I personally witness Jesus his bad ol' self coming down right in front of me, walking on water, and then hanging out with me all day to explain why Born-Again Christianity is the TRUTH, I'd very much be forced to consider the possibility that such might be the case.
      One day it may be possible to set an experience like that up for people (have you read "Do Androids Dream of Electric Sheep"?). I mean drugging someone as the sleep then having them wake up into some sort of hyper-realistic virtual reality could be a great way of convincing them of something like that. Then after the experience is over just put you back where you were and you wake up a few days later. That would be quite the scam compared to just playing on people's emotions.
    61. Re:Ah, but... by LordLucless · · Score: 2, Interesting

      Firstly, a distinction should probably be made between the mechanism of evolution (living things adapt over time), the concept of abiogenesis (that life arose from non-living matter), and the terms (which I dislike) "macro"evolution and "micro"evolution - meaning respectively, that evolution is responsible for significant differences between organisms, and that evolution is only capable of making slight adjustments to existing organisms (and would be incapable of, say, evolving a single-celled organism into a horse).

      Just as the term "creationism" is somewhat of an umbrella term, covering a whole spectrum of more specific beliefs, so the term "evolution", at least in popular usage, seems to conflate a whole bunch of the terms I outlined above. Some elements of evolutionary theory are compatible with some aspects of creationist belief, some are not. Saying that the two are incompatible is a generalization that is probably not justified.

      --
      Just because you're paranoid doesn't mean there isn't an invisible demon about to eat your face
    62. Re:Ah, but... by bobdevine · · Score: 1

      natural selection In the early days, "strict Darwin" proponents argued that natural selection was the only determinant in evolution. But that made difficult explaining the peacock's showy tail. But that neglected other factors, such as sexual selection where the likelihood of mating is improved. Proving those effects will be harder, I think.

    63. Re:Ah, but... by dch24 · · Score: 5, Informative
      I don't know why you posted AC, but I couldn't accept your Albert Einstein assertion on faith... even if you had signed your post.

      But the sources for relevant Wikipedia articles are credible primary sources. (Brian, Dennis (1996), Einstein: A Life, New York: John Wiley & Sons, p. 127, ISBN 0-471-11459-6) To save you some time, I've added some line breaks but retained the context.

      In 1929, Boston's Cardinal O'Connell branded Einstein's theory of relativity as "befogged speculation producing universal doubt about God and His Creation," and as implying "the ghastly apparition of atheism." In alarm, New York's Rabbi Herbert S. Goldstein asked Einstein by telegram: "Do you believe in God? Stop. Answer paid 50 words." In his response, for which Einstein needed but twenty-five (German) words, he stated his beliefs succinctly:

      "I believe in Spinoza's God, Who reveals Himself in the lawful harmony of the world, not in a God Who concerns Himself with the fate and the doings of mankind."

      The rabbi cited this as evidence that Einstein was not an atheist, and further declared that "Einstein's theory, if carried to its logical conclusion, would bring to mankind a scientific formula for monotheism." Einstein wisely remained silent on that point.
      Now for the second quote:

      "It was, of course, a lie what you read about my religious convictions, a lie which is being systematically repeated. I do not believe in a personal God and I have never denied this but have expressed it clearly. If something is in me which can be called religious then it is the unbounded admiration for the structure of the world so far as our science can reveal it."

      (Helen Dukas and Banesh Hoffman (eds) (1981). Albert Einstein, The Human Side. Princeton University Press, 43.)
    64. Re:Ah, but... by Anonymous Coward · · Score: 0

      The biographical works which you cited are not primary sources.

      A primary source would be a original record of the telegrams, a letter, a diary entry, testimony from a witness, etc.

      A biography is usually a secondary source. It ought to rely mainly on primary sources.

      The wikipedia is a tertiary source. It often relies on secondary sources.

    65. Re:Ah, but... by Profane+MuthaFucka · · Score: 4, Funny

      Elk. Elk. Elk. Moosen live in Sweden. Elken live in Deutchland. And whoever heard of a critical moose? Is that when you have enough moose that fission becomes self-sustaining?

      --
      Fascism trolls keeping me up every night. When I starts a preachin', he HITS ME WITH HIS REICH!
    66. Re:Ah, but... by Dun+Malg · · Score: 1

      I mean drugging someone as the sleep then having them wake up into some sort of hyper-realistic virtual reality could be a great way of convincing them of something like that. Aye, for that reason I'd only consider the possibility. I'd naturally have to consider it in light of other, more plausible explanations. My first thought, of course, would be that it's a trick. In a VR-capable future, I reckon that's the first thing I'd suspect.
      --
      If a job's not worth doing, it's not worth doing right.
    67. Re:Ah, but... by Profane+MuthaFucka · · Score: 1

      Are you sure that the rule isn't love thine enemies ... for DINNER?

      --
      Fascism trolls keeping me up every night. When I starts a preachin', he HITS ME WITH HIS REICH!
    68. Re:Ah, but... by ZombieRoboNinja · · Score: 1

      >>Referring to scientific facts in terms of 'faith' and 'belief' is rather an unfortunate choice of terminology. There's no need to believe in facts. There's no need to 'have faith' in random mutations--you can prove to yourself that such things happen, and thus have no need for 'faith'.

      http://18th.eserver.org/hume-enquiry.html#4.1

      Hume says it smarterer than I can, but basically, no. Scientific endeavor is based on faith in the concept of "cause and effect," which we can never have any (non-circular) reason for believing. You can only "prove to yourself" facts about DNA, et cetera if you're already willing to make a boatload of assumptions about the nature of the Universe.

      Of course, you can go even further back and ask the same questions Descartes asked. (Or zoom forward and look at the Matrix pop-culture version of them.) How do we KNOW that the world around us is "real" and not just an extended illusion, or dream, or computer simulation? Scientific observation can only prove that it's a highly consistent and detailed reality/illusion/dream/Matrix. Descartes could only "prove" the existence of the world by relying on the concept of a benevolent God. Is that an assumption you're willing to work from?

    69. Re:Ah, but... by repapetilto · · Score: 1

      Rock on... One thing I always thought about growing up (raised Catholic) was the one bible quote about "if you truly believed you could you could move a mountain" or something to that effect. I mean taking it sort of metaphorically I always came up with thought experiments like kidnapping someone as they slept and recreating their house on the moon or at the bottom of the sea with only the first room pressurized and when they opened the door they would truly believe they could breath but there would be no air and physical reality would take over regardless of belief. Now of course I see it's more of a metaphor for you can breath in space if you try hard enough (build a space suit)

    70. Re:Ah, but... by Nimey · · Score: 1

      That depends on what "is" is.

      --
      Hail Eris, full of mischief...

      E pluribus sanguinem
    71. Re:Ah, but... by r_jensen11 · · Score: 1

      Keep in mind, "Creationism" != "Religious faith". There are plenty of people who believe in God and who accept the scientific theory of evolution. But they are not creationists. The second part of thise line makes sense, but the first doesn't. That's because the real argument goes along the lines of:

      "Theory of Evolution" != "Big Bang Theory"

      Why is it, that even here at /., that people regularly confuse the Theory of Evolution with the Big Bang Theory? Creationism and the Theory of Evolution are not mutually exclusive. Creationism and the Big Bang Theory essentially are (It depends on how early you want to trace time, since one can* argue that time existed before the big bang.)

      *since I have not done any thorough research on this subject, I'm going to assume that one can argue, but I'm not making any statement as to how valid the argument could be.
    72. Re:Ah, but... by Anonymous Coward · · Score: 0

      However, let us not forget, that a hypothetical "tomorrow" as the proceeding parties have mentioned, can never be achieved in actuality. Therefore, the desired conditions of this mental imbroglio can not be fulfilled booleanically.

    73. Re:Ah, but... by ibbey · · Score: 2, Funny

      Grammatically, linguistically and geographically you might be correct, but you have to give it to him that a moose are funnier than elk.

    74. Re:Ah, but... by ozmanjusri · · Score: 1
      the ability to do so is not an adaptive trait, as GA experiments have shown.

      Do you have any citations for this?

      I believe it would be a logical fallacy to claim to test the adaptive value of an absence of reasoning ability with genetic algorithms, and if the test involved reasoning, it wouldn't be a GA.

      My BS jargon-sniffer is starting to tingle...

      --
      "I've got more toys than Teruhisa Kitahara."
    75. Re:Ah, but... by Lemmy+Caution · · Score: 2, Funny

      A notable exception to the "k sounds are funny" law of humor.

    76. Re:Ah, but... by martinX · · Score: 1

      How do we KNOW that the world around us is "real" and not just an extended illusion, or dream, or computer simulation?

      In the middle of an existential crisis, I once asked a friend that very same question. I asked it quite seriously. We were in a pub at the time. His reply: "I don't know, but I reckon if you asked that to the wrong person in this place, you might cop a punch in the head."

      Of course one could argue that the sensations received as "a punch in the head" are also complete figments, but how many punches are you willing to take in pursuit of that truth?

      I just shut up and ordered another beer.

      --
      When they came for the communists, I said "He's next door. Take him away. Goddam commies."
    77. Re:Ah, but... by Lemmy+Caution · · Score: 1

      I'm not religious, but identifying people as enemies just because of their belief systems is silly.

      Real, quality enmity comes from deeply opposed interests. I get the feeling that you don't have enough life-experience yet to develop any truly interesting enemies.

    78. Re:Ah, but... by sacrilicious · · Score: 1
      "Intelligent Design" is a way of claiming the development of the species is/was directed by God without invoking the 'G' word. It still ascribes the development to an external intelligence which designed the system from scratch. Organisms self-selecting beneficial genes is not what they're talking about when they say "Intelligent Design".

      Agreed. What the article discusses is -- to put it in search-space terminology -- that the observed evolution was sophisticated enough to incorporate hill-climb refinement, not just completely random mutation as previously supposed by some. This does not end up being a teleological statement, but merely a statement about intermediate-level mechanisms in the evolution process. It means that genes are even more evolved than previously thought.

      --
      - First they ignore you, then they laugh at you, then ???, then profit.
    79. Re:Ah, but... by kcelery · · Score: 1
      With or without God, all animals evolve.

      It is just, in my belief, so happened that the clue lies in missing gene of us that makes the difference. During the evolution process, something happened. We lost the ability to grow hair. Imagine our naked ancestors' life in a snowy day 20000 years ago. For survival something must be done to keep warm. Whatever stunt they pulled, the natural selection kept those who could survive and rejected those couldn't. For these naked animals to survive cold winter, they have to use the brain. To transfer fur from other animals to their own protection, and to do the logistics of food in winter, etc.

      Then around 8000 years ago, some wise man, who started to 'think' of the distinction between human and other forms of animal. The answer lies around them, it is their own cloth. We don't have fur, so we created cloth to protect ourselves. We don't have $X, let's create $X and then we survive. The argument sounds so well, people put 'creation' as an immortal. And named it as GOD. The idea was so well, that they created GOD in their own image. Yes, not the other way round.
      If you wonder why 'the fan club' fight so hard to preach creationism over Darwinism in schools, is because creationism is the founding stone of their belief.
      Ok, in my own words, creationism is grown out of evolution. The two ideas run in different directions and they do not conflict each other.


      Back to the deterministic and randomness issue. Try this, say a polynomial (x-1)(x-2)(x-3)=0 there are three roots, namely x=1,2,3. Use genetic programming to find roots of this polynomial, with initial value of 0, and a certain objective function. The starting gene which was clueless in beginning start collecting information after a few generations. And soon arrive at one of the roots after some generations, say 3. This part work as a, quite, deterministic search process. And after many generation, the root is still 3. To find the remaining 2 roots one must introduce some randomness to the gene.

    80. Re:Ah, but... by gad_zuki! · · Score: 1

      Liberals have a known factual bias.

      Creationists have a known fantastic bias.

      Type II cassette has a normal bias.

    81. Re:Ah, but... by xPsi · · Score: 4, Funny

      I think the "oo" trumps the "k" in this case.

      --
      i\hbar\dot{\psi}=\hat{H}\psi
    82. Re:Ah, but... by Spazmania · · Score: 4, Insightful

      It's possible to think a particular church hierarchy is despicable without finding Christianity itself objectionable. It's unfortunate that you don't see the distinction, particularly given the overwhelming evidence of the existence of groups which have splintered from the church over the years as a result of similar frustrations.

      You offered a German proverb, I'll swap you an English one: you threw the baby out with the bathwater.

      --
      Moderating "-1, Disagree" is simple censorship. Have the guts to post your opinion.
    83. Re:Ah, but... by Anonymous Coward · · Score: 0

      this is a very misleading article. i read it several times and it left me wondering if i understood evolution correctly.

      i don't think that mutation is deterministic. it is random. i mean, you're not going to find 9 isolated breeding groups that have skin color changes that are cancerous, and one that's not. not that kind of random. but you're not going to find 10 isolated breeding groups with the same kind of mutations. that kind of random.

      these guys seems to imply that there is purposeful advantage to every random mutation. but after a population is selected based on that trait (for whatever reason), it may seem that the trait was determined.

      to term the genetic variation prior to the selection deterministic is very close to saying there is an intelligent designer.

    84. Re:Ah, but... by Spazmania · · Score: 1

      There is no such thing as sound method, in truth.

      That's called "Nihilism." It's a particularly nasty branch of philosophy that made Nietzsche a famous man.

      --
      Moderating "-1, Disagree" is simple censorship. Have the guts to post your opinion.
    85. Re:Ah, but... by smidget2k4 · · Score: 1

      Evolution, of course!

    86. Re:Ah, but... by Spazmania · · Score: 1

      Webster's circa 1995 has it as:

      creationism (-izem)
      n.
      Theol.
      1 the doctrine that God creates a new soul for every human being born: opposed to traducianism
      2 the doctrine that ascribes the origin of matter, species, etc. to acts of creation by God

      But surely the authors of dictionary.reference.com have it right because, hey, its reference.com!

      --
      Moderating "-1, Disagree" is simple censorship. Have the guts to post your opinion.
    87. Re:Ah, but... by Anonymous Coward · · Score: 0

      "All science comes from the idea that one does not know and uses a sound method to determine things. "

      Not really. Because one effectively doesn't know what a "sound method" is until it's been shown "to be sound." The tools that science uses can't really validate themselves.
      Without getting into a large talk on the philosophy of science it's safe to say that *most* science comes from trusting that the knowledge and methods that came before it are valid *and* testable. Such methods usually aren't tested until there's a reason to check them though.

      "I don't know of any religion that accepts "that's the way things are", they all try to say "no it's not! This is the result of our doing something!!""

      Most religions accept things as the way they are... they just happen to have a wider scope of the universe than what science says. Frankly, so does everyone. Not many people go around trying to use the scientific method to prove that the civil war happened, or that a 650nm wavelength of light looks "red".

      What probably bothers you (and what bothers me as well) is when someone starts apply a methodology external to science's against science. Creation Science is such a thing. But frankly, to me, it's just as annoying when someone attempts to use science's methodology (usually incorrectly) to the basis of a foundation external to science. "In the bible it says that Joshua stopped the sun, but obviously if that happened everyone on the earth would go spinning of into space. Thus there can be no God."

      In either case. Most science is only useful at relative speeds.

    88. Re:Ah, but... by omris · · Score: 2, Insightful

      see, we're scientists. we don't like to use that word.

      we call it a 'prediction'. it's less scary.

      faith is what we have that our predictions will be correct. but only in secret.

    89. Re:Ah, but... by Tablizer · · Score: 1

      Einstein pulls a clever one by equating the *mysteries* of the universe to "God". I.e. God is the mystery. This allows him to say he "believes in God", but in fact most would label it "agnostic". I think he knew that he would be far less popular if he called himself an agnostic. Then again, the line between mystery and supernatural may be a matter of messy semantics and deep definition fights.

    90. Re:Ah, but... by Slur · · Score: 1

      I would like to point out that this is an obvious analogy meant to illustrate the proper approach to what the buddhists refer to as "defilements of the mind" - those unskillful means we have adopted to cope with a world we view adversarially. Christ's parable is saying that rather than stir up the mind by trying to root out idealism through idealism, you should instead follow the effective precepts - love your enemy, practice forgiveness, pray in solitude, consider others, etc. Through a faithful practice of prayer the cortical neurons you would attempt to dissimilate through self-alienation will instead be assimilated into the emergent self at the moment of realization.

      The Vipassana method, Zen shikan-taza, or general "mindfulness" meditation all engender the same result, by a continuous practice of letting go we gradually lose our tendency to view the world adversarially, we learn to be open to the conditions of the present moment. Inevitably at some stage the mind transcends the imposed self-other view of the world, and one directly realizes the wholeness of the present moment and one's indivisible part in it.

      Or so I've come to understand...

      --
      -- thinkyhead software and media
    91. Re:Ah, but... by Slur · · Score: 2, Interesting

      It all makes sense to me. It's a reasonable question to ask: Does evolution evolve? Certainly it ought to. Those organisms whose DNA better tweaks the likelihood of mutations in useful ways would tend to be better evolvers. If it happens to be a trait of DNA that some regions have more "mutational flexibility" than others, eventually these regions would tend to be arranged to favor useful mutations. And if enough of these regions exist it could form a sophisticated predictive system. Now imagine DNA in which "concerted mutations" benefit the organism, but only in certain reinforcing or complimentary arrangements. Then when certain mutations prove beneficial, those others that compliment them will begin to emerge too.

      Interesting stuff, how systems with simple rules can create such amazingly complex systems as ourselves... and in a sense, blindly.

      --
      -- thinkyhead software and media
    92. Re:Ah, but... by MPolo · · Score: 2

      I think that the problem is that there are a lot of people who use the name "Intelligent Design" for different things. I suspect anyone who is reading Slashdot and considers himself a follower of Intelligent Design has a theory somewhat like the GP post: Evolution is an observed fact, but the mechanism for that observed fact is unclear, but seems to show signs of being directed toward positive results, hence the hypothesis of an intelligent designer who either planned it all that way in advance, or nudges the system along the way, or similar -- the point being that evolution is fully accepted by these people.

      Unfortunately, there is a much more vocal group of people who use the name "Intelligent Design" as a code-word for creationism according to Genesis 1-2. These people deny evolution and generally see all differentiation of species as a direct intervention of the creator. This group uses the name because it's much easier to sell politically than creationism...

      I suppose we need a new term to differentiate the two concepts, so that we are at least on the same wavelength when we disagree about this...

    93. Re:Ah, but... by CougMerrik · · Score: 2, Informative

      "In his encyclical Humani Generis (1950), my predecessor Pius XII has already affirmed that there is no conflict between evolution and the doctrine of the faith regarding man and his vocation, provided that we do not lose sight of certain fixed points....Today, more than a half-century after the appearance of that encyclical, some new findings lead us toward the recognition of evolution as more than an hypothesis. In fact it is remarkable that this theory has had progressively greater influence on the spirit of researchers, following a series of discoveries in different scholarly disciplines. The convergence in the results of these independent studies -- which was neither planned nor sought -- constitutes in itself a significant argument in favor of the theory." (John Paul II, Message to the Pontifical Academy of Sciences on Evolution) I believe most mainstream Christian faiths accept generally all mainstream scientific theories. Thermodynamics, gravity, electromagnetism, mechanics, biology..I think we're all on board. I don't see what should infuriate you about that. There are ignorant Christians who like to argue, and ignorant atheists who like to argue as well. They're both equally infuriating to reasonable people.

    94. Re:Ah, but... by fimbulvetr · · Score: 4, Funny

      A moose once bit my sister.

    95. Re:Ah, but... by ardle · · Score: 1

      Great story :-)

    96. Re:Ah, but... by superwiz · · Score: 1

      Trying to argument by calling things "merely the way they are" is what I hate my Christian enemies for.

      Otherwise known as "reason stops where faith begins"? I'll just link to a previous discussion, before it repeats.

      http://slashdot.org/comments.pl?sid=420680&cid=22073210
      --
      Any guest worker system is indistinguishable from indentured servitude.
    97. Re:Ah, but... by foobsr · · Score: 2, Informative

      You offered a German proverb, I'll swap you an English one: you threw the baby out with the bathwater.

      Hmm.

      "When the proverb "Don't throw the baby out with the bath water" or its parallel proverbial expression "To throw the baby out with the bath water" appear today in Anglo-American oral communication or in books, magazines, newspapers, advertisements or cartoons, hardly anybody would surmise that this common metaphorical phrase is actually of German origin and of relatively recent use in the English language. It had its first written occurrence in Thomas Murner's (1475-1537) versified satirical book Narrenbeschwörung (1512) which contains as its eighty-first short chapter entitled "Das kindt mit dem bad vß schitten" (To throw the baby out with the bath water) a treatise on fools who by trying to rid themselves of a bad thing succeed in destroying whatever good there was as well. In seventy-six rhymed lines the proverbial phrase is repeated three times as a folkloric leitmotif, and there is also the first illustration of the expression as a woodcut depicting quite literally a woman who is pouring her baby out with the bath water.1 Murner also cites the phrase repeatedly in later works and this rather frequent use might be an indication that the proverbial expression was already in oral currency towards the end of the fifteenth century in Germany."
      http://www.deproverbio.com/DPjournal/DP,1,1,95/BABY.html

      Anyway, somehow I see it perfectly fits.

      CC.

      --
      TaijiQuan (Huang, 5 loosenings)
    98. Re:Ah, but... by ardle · · Score: 1

      Spot on.
      The researchers are claiming to have experimentally verified something that can be proven mathematically: traits that help a system to survive tend to survive in their own right.
      One could argue that their results are biased: the nematode systems they studied had already learnt this by virtue of having survived since the beginning of time ;-)

    99. Re:Ah, but... by Anonymous Coward · · Score: 0

      I'd say it was a reasonable extrapolation from the data collected to date.

    100. Re:Ah, but... by ricosalomar · · Score: 1, Funny

      Mind you, moose bites can be veri nasti.

    101. Re:Ah, but... by ljgshkg · · Score: 1

      Even after force of gravity is "discovered", your example is still "the way things are". And gravity itself is also "the way things are". By scientific research, you just know more and more about "the way things are". To find religions that accept "that's the way things are", look at east Asia (esp. Taoism) as religion over there is highly philosophical. Anyway, who knows if "the ways things are" are the rules created by god or not? Some people believe in it, some people don't. Both camps are religion because believe in god or not is itself purely a believe.

    102. Re:Ah, but... by background+image · · Score: 5, Interesting

      Hume says it smarterer than I can...

      Hume--and Kant--are also a lot 'smarterer' than me ;-)

      However, Kant did come up with quite a plausible theory for why Hume was not quite right about that (and in doing so, essentially invented epistemology as a separate area of study). Whether or not he successfully demonstrated that his theory was correct is (still) an open question.

      Very briefly what he supposed was that any experience whatsoever of the 'world' is only accessible through certain features of our perceptual and cognitive apparatus. Chief among these are time and space, but in addition, there are twelve a priori categories, including "causality and dependence" according to which experiences are ordered.

      To put it in plainer language, time and space have to do not with reality as such, but with how we perceive reality, while the categories (including causality) and reason allow us to systematize our experiences. It's possible to think of time and space as analogous to being stuck in a space suit with a yellow-tinted visor. You can look through the visor, but everything will look yellow. You can't really be sure that everything--or anything--is yellow, but the only way you can see anything at all is to see it as something yellow.

      The practical upshot of this is that according to Kant, while (contra Hume) genuine scientific inquiry is possible without recourse to faith in causation etc, and while our experience is of a real world, there are definite limits to human knowledge:

      1. because time and space are properties of our perceptual and cognitive apparatus, it is absolutely impossible to discover what the world might be 'like' without reference to them, and
      2. the answers to most of the traditional metaphysical questions--such as questions of the existence of god or the immortality of the soul--cannot be determined scientifically.

      For more information, you can go to the Stanford Encyclopedia, or to the source, but when reading Kant, always be sure to take the proper precautions: take adequate food and water, allow plenty of time to get back before dark, and always let somebody know where you're going...

    103. Re:Ah, but... by Weedlekin · · Score: 1

      "I don't know of any religion that accepts "that's the way things are", they all try to say "no it's not! This is the result of our doing something!!""

      Most of them have something that boils down to the pretty much the same thing, e.g. "God moves in mysterious ways" (translation: shit happens).

      --
      I'm not going to change your sheets again, Mr. Hastings.
    104. Re:Ah, but... by Chapter80 · · Score: 1

      Is the following a fact or faith?

      The Sun will rise tomorrow (whether over clouds or otherwise).
      This is fact.

      My assumptions are that you are referring to the appearance of the sun over the horizon as the sun "rising", discounting the obvious (that it's really the motion of the Earth causing this phenomena.)

      Tomorrow is defined by the rising of the sun. So the next time the sun rises, it's tomorrow. Now, you could argue that there is "some future day" where the sun will stop rising. But that won't be a new day. That will be part of today.

      You could also argue that a "tomorrow" could occur starting at midnight, and then the sun burns out before dawn. However, at the stroke of midnight, the sun is rising somewhere on earth, so this case is handled as well.

      The logical analysis of this is: Is the statement "If [tomorrow] then [Sun will rise]" True?. And the truth table specifies that if [tomorrow] is false (i.e. it's today), then whether the sun rises or not, the statement is true.

      And if I am proven wrong, then we're all dead.

    105. Re:Ah, but... by Weedlekin · · Score: 1

      "Referring to scientific facts in terms of 'faith' and 'belief' is rather an unfortunate choice of terminology. There's no need to believe in facts. There's no need to 'have faith' in random mutations--you can prove to yourself that such things happen, and thus have no need for 'faith'.

      Have you, or for that matter the majority of people who claim that science deals with "facts" actually tested anything beyond the most basic ones (i.e. the sort of experiments that Galileo and Newton could do)? If you haven't done so, then you're basing much of your world view on what you've told rather than what you really _know_ to be true, which is a pretty good definition of belief.

      --
      I'm not going to change your sheets again, Mr. Hastings.
    106. Re:Ah, but... by KnowledgeKeeper · · Score: 1

      Is the following a fact or faith? The Sun will rise tomorrow (whether over clouds or otherwise). What say ye?

      It's neither. The Sun doesn't "rise" - the Earth rotates. Reformulate the question to a sensible one.

      --
      It is always better to be a first grade version of yourself than a second grade version of someone else.
    107. Re:Ah, but... by IngramJames · · Score: 1

      In the middle of an existential crisis... I just shut up and ordered another beer. [emphasis added]

      Just out of curiosity, did your crisis begin before or after the fifth pint of the evening had been consumed?
      --
      'No rational religion claims "supernatural" exists, that's an atheist slander.' - seen on slashdot.
    108. Re:Ah, but... by blind+monkey+3 · · Score: 1

      Even if they're politicians?

      --
      BM3
    109. Re:Ah, but... by marcello_dl · · Score: 1

      I thought it was well known we "almost never" eat other people's bodies.

      --
      ---- MISSING MISCELLANEOUS DATA SEGMENT --- [sigdash] trolololol
    110. Re:Ah, but... by kanweg · · Score: 1

      "Those kinds are bad not because they believe in some Skydaddy, but because they actively refuse to acknowledge scientific fact."

      Well, however much refusal of scientific facts is not my cup of tea, I could even live with THAT, but what I find utterly unacceptable is that they impose their beliefs on other people and making their lives (including private life such as sex life) miserable (gays, women, blacks etc.).

      Bert

    111. Re:Ah, but... by IngramJames · · Score: 1

      In my experience, liberals have always worked hard to counter facts


      I think you mean politicians. Of all parties. Ignoring facts or lying would be counter to basic liberal policies - freedom of the individual, freedom of thought and speech, and so forth. And those exact policies would be far more likely to be exposed in a liberal party than a left-wing or a right-wing party (which are both based on dogma, ultimately).

      The Republicans have a far geater reputation in fact-distortion than the Democrats, for example (outside the Republican party, that is, and especially in Europe, where we have a more neutral press overall). I note that 4 out of 10 Republican candidates this year do not believe in evolution, whereas all the Democrat candidates do.

      So.. remind me.. which side likes to ignore facts again..?
      --
      'No rational religion claims "supernatural" exists, that's an atheist slander.' - seen on slashdot.
    112. Re:Ah, but... by tgibbs · · Score: 1

      It all makes sense to me. It's a reasonable question to ask: Does evolution evolve? Certainly it ought to. Those organisms whose DNA better tweaks the likelihood of mutations in useful ways would tend to be better evolvers. If it happens to be a trait of DNA that some regions have more "mutational flexibility" than others, eventually these regions would tend to be arranged to favor useful mutations. And if enough of these regions exist it could form a sophisticated predictive system. Now imagine DNA in which "concerted mutations" benefit the organism, but only in certain reinforcing or complimentary arrangements. Then when certain mutations prove beneficial, those others that compliment them will begin to emerge too.


      It is certainly possible to imagine that evolution could select some regions of DNA to be more mutable than others. Something similar happens in the development of the immune system. But it is hard to imagine that evolution could promote favorable mutations over unfavorable ones, because the only way it has of recognizing a favorable mutation is to try it, and if it is favorable, why was it not retained in the genome, or at least in the population?

      One can imagine that a bias toward certain mutations that have been advantageous in the past could be "programmed in" as a way of compressing the genome (I wrote a paper with this speculation back in the '70's), but it is hard to imagine this being of value in large-genome organisms like us, who apparently carry around considerably more DNA than they actually use, and we have a pretty sophisticated compression system in the form of alternative splicing.
    113. Re:Ah, but... by ajs318 · · Score: 1

      But the bathwater is minging, and the baby is dead.

      --
      Je fume. Tu fumes. Nous fûmes!
    114. Re:Ah, but... by wasabii · · Score: 1

      It's neither. It's a theory based on past evidence. It's a pretty well agreed upon theory.

      That's what science lets us do: PREDICT. We can measure past events and past evidence and make logical assumptions about future occurances. This is NOT faith.

      THe real answer is:

      "Based on past experience, yes, I'm going to go under the assumption that the Sun will rise tomorrow. But it is not certain."

    115. Re:Ah, but... by ajs318 · · Score: 1

      There are only three "articles of faith" for a scientist. The first is that everything in the universe can be explained in terms of a set of rules, regardless of the extent to which we know and understand the rules. The second is that these rules apply without exception to everything in the universe. The third is that the rules are unchangeable.

      --
      Je fume. Tu fumes. Nous fûmes!
    116. Re:Ah, but... by hittman007 · · Score: 1

      Will the sun rise tomorrow being fact or faith.

      I say neither.

      How we divide up time is simply based on past experience of the rising and setting of the sun. The sun rising is nothing more than a perception seen by most of the planet based on the planets rotation. There are places on the planet where at certain times the sun never rises and never sets for months on end. Even in pure daylight or pure darkness these places still count days like the rest of us. Because of this I conclude that the time period of "tomorrow" is not necessarily based on the perception of the sun rising.

      As for the majority of the earth, we base our perception of the sun "rising in the sky" on past references. It happened yesterday, and the day before, and the day before, ect. This is inductive reasoning, or (to put it simply) an assumption based on experience. *IF* things continue the way they are the sun will be perceived as rising tomorrow for a majority of the planet earth. Will things continue as they have? Very likely yes, but I cannot say for sure until tomorrow after the sun rises from my point of view.

      Hittman

      --
      --- When you start with the conclusion that you want, then throw out any facts that don't agree, is it true?
    117. Re:Ah, but... by arminw · · Score: 1

      ......There are only three "articles of faith" for a scientist. The first is that everything in the universe can be explained in terms of a set of rules, regardless of the extent to which we know and understand the rules. The second is that these rules apply without exception to everything in the universe. The third is that the rules are unchangeable..........

      There are only three "articles of faith" for a Believer. The first is that everything in the universe can be explained in terms of God, regardless of the extent to which we know and understand the Him. The second is that God controls without exception everything in the universe. The third is that the God is unchangeable.

      There, changed it slightly for you. I could add that, like human rules, someone made them. Maybe God is the one that made the "rules" that scientists BELIEVE in.

      --
      All theory is gray
    118. Re:Ah, but... by mysidia · · Score: 1

      Intelligent Design is creation according to Genesis 1-2 by a different name.

      If you are thinking Intelligence-Directed/Assisted Evolution, then that's something totally different from ID.

      In that case, you aren't agreeing evolution happens, you just have additional theory about the source of certain mutations, and other things that happen alongside mutation.

      That particular argument doesn't oppose evolution. Theory of evolution isn't exclusive it doesn't say that evolution is the only thing that effects species development.

      Whereas ID claims there is no 'natural selection', and the only way species develop is by being determined by a designer.

      The problem with ID is it is not falsifiable, there is no way to prove that there was no intelligent designer, you can't say "Since we can't see or locate this creator, they must not exist", so it is not an admissable theory: Before a theory can be admissable, you need to explain the method that can be used to disprove it, if it's wrong.

      Natural Selection is an admissable theory, because an experimental method exists to disprove it, if it is wrong: collect remains/fossils/dissect members of a species over a long period of time, where species have naturally developed genetic traits. You can disprove natural selection if you find examples where traits of a species developed that made the population of the species less likely to survive. There is logistical difficulty attempting this, but it is at least possible, if natural selection is an incomplete theory, you should be able to find cases where something happened other than natural selection.

    119. Re:Ah, but... by STrinity · · Score: 1

      and I think that you misunderstood my usage of 'enemy'. I don't hate them, but I must oppose them.

      Trying to argument by calling things "merely the way they are" is what I hate my Christian enemies for.
      Is it too much to expect trolls to be self-consistent?
      --
      Les Miserables Volume 1 now up with my reading of
    120. Re:Ah, but... by arminw · · Score: 1

      ....I'd naturally have to consider it in light of other, more plausible explanations........

      It depends on whether you WANT to believe or not. Jesus said that even if someone were to come back from the dead, those kind of people would not believe whatever such a returnee would say. NOTHING can convince someone to believe anything they don't want to believe. Don't confuse me with the facts, my mind is made up.

      --
      All theory is gray
    121. Re:Ah, but... by kurzweilfreak · · Score: 1

      There are only three "articles of faith" for a Believer. The first is that everything in the universe can be explained in terms of The Invisible Pink Unicorn, regardless of the extent to which we know and understand the Her. The second is that The Invisible Pink Unicorn controls without exception everything in the universe. The third is that the Invisible Pink Unicorn is unchangeable.

      Still makes just as much sense, and is just as believable.

      --

      kurzweil_freak

      5th Kyu Genbukan Ninpo/KJJR student

      Be the darkness that allows the light to shine.

    122. Re:Ah, but... by shawb · · Score: 1

      I am close to agreeing with you, but with a slightly different paradigm (sorry about the PHB word, but I feel it best expresses the concept.) I do not think that a mechanism exists for increasing the likelihood of mutations in a certain region of DNA. What does exist are mechanisms to prevent mutations and to repair damage done to segments of DNA. Assuming that natural selection works on the level of the gene, it would logically follow that protection and repair mechanisms would be themselves adapted to specialize on regions of DNA which are the most likely to cause problems when mutations arise. Those regions which allow for stepwise evolution would therefore not be protected with the same intensity as those regions in which mutations would be fatal.

      In your post, however, I did notice one fairly important misunderstanding of the mechanisms for evolution. Your statement that if (a mutation)is favorable, why was it not retained in... ignores the temporal aspect of evolution, in that the environment changes. Evolution selects for traits (and therefore gene sequences which allow for expressions of those traits) based on the suitability of the environment that the organism lives in. What might be favorable in one place spatially or temporally might be harmful to the organisms success under different circumstances. Evolution does not even need to rely on external environmental change to stimulate genetic change, as certain gene combinations may have a synergistic (again, sorry for the PHB term) effect in which one is really not that beneficial unless the other exists. In other circumstances, a potentially deleterious mutation can give some benefit such as being a heterozygous carrier for sickle cell anemia giving increased resistance to malaria.

      While the game of evolution is governed by a very small number of actual laws, there are myriad ways in which to win and multitudes of solutions and workarounds to every problem.

      --
      I'll never make that mistake again, reading the experts' opinions. - Feynman
    123. Re:Ah, but... by ajs318 · · Score: 1

      Except that "everything obeys the same rules" and "God controls everything" are in no way equivalent.

      You can look for evidence of two things not obeying the same rules. During your search, the more things you find that do obey the same rules, the greater your confidence that it might be true. If you think you have found evidence of such an anomaly, then you have to re-examine all the evidence, because it's possible that your own understanding of the rules is in error. (Hence, relativity ..... if you assume all velocities are much smaller than the speed of light, then Einstein's equations simplify to Newton's equations.)

      --
      Je fume. Tu fumes. Nous fûmes!
    124. Re:Ah, but... by Anonymous Coward · · Score: 0

      > Except that "everything obeys the same rules" and "God controls everything" are in no way equivalent.

      Even calling them 'rules' has implications and assumptions entangled within...

    125. Re:Ah, but... by Anonymous Coward · · Score: 0

      > I'm not religious, but identifying people as enemies just because of their belief systems is silly.

      Even when their "belief systems" include justifying the threat of nuclear civil war as a means to end legal abortion?

      http://www.christiangallery.com/strategy.html

    126. Re:Ah, but... by Lemmy+Caution · · Score: 1

      The set of people advocating nuclear civil war is a very small sub-set of the people who have religious beliefs. It isn't their beliefs that make them enemies: it is their advocacy of nuclear civil war (assuming they were in any situation to do anything about it.) And one could advocate nuclear civil war for beliefs that you shared, such as a general misanthropic attitude. There are lots of people who share my beliefs, but who advocate or pursue things that put them at odds with me.

    127. Re:Ah, but... by sco08y · · Score: 1

      You've got "facts" confused with "wishful thinking".

    128. Re:Ah, but... by shimage · · Score: 1

      I screwed up the html, apparently, and when I went to comment on how I had screwed it up, slashdot wouldn't let me post because I had just posted. So I waited, and tried again, but this time, it wouldn't let me post because I typed my entry too fast (I pasted the text in since I'm lazy and didn't want to retype it). At that point I said fuck it; people can figure this shit out on their own. I guess they can't.

    129. Re:Ah, but... by shimage · · Score: 1

      If you had read the posts that I was replying to, this point is covered there. The paper is saying that the selection process is deterministic. That is to say, that natural selection is a driven process, not that the mutations are deterministic (which, as you so adeptly pointed out, is clearly false). But you know all this, because you read the article carefully, right?

    130. Re:Ah, but... by Anonymous Coward · · Score: 0

      > It isn't their beliefs that make them enemies: it is their advocacy of nuclear civil war (assuming they were in any situation to do anything about it.)

      "It's not the Sominex that makes you sleep, it's the soporific qualities of the medicine."

    131. Re:Ah, but... by shimage · · Score: 1

      My read of the article (which is second hand, since I didn't read the actual paper, but rather this news article commenting on the paper) was that the researchers proved that natural selection is a driven process, which to be honest, no one is contesting. Yes, the mutations are not driven, which is why they usually result in cancer. Another way to arrive at this conclusion is that evolution refers to populations, whereas only individuals can mutate. When a specie changes, that's evolution, and it's fairly independent of individual mutations, although it relies on them.

    132. Re:Ah, but... by shlashdot · · Score: 1

      The part of science that is not about facts is of relatively little value, compared to the part that is about facts. It does exist, conducted by people who are too lazy to do experiments or get into the field. Let me guess, that describes you.

      --
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    133. Re:Ah, but... by Thing+1 · · Score: 1

      Hume--and Kant--are also a lot 'smarterer' than me ;-)

      That may well be, but Emmanuel Kant was a real pissant. Proof.

      --
      I feel fantastic, and I'm still alive.
    134. Re:Ah, but... by Boronx · · Score: 1

      Thanks for the information. I'd been musing just yesterday on what chilling events led to the first utterance of this phrase.

    135. Re:Ah, but... by Pfhorrest · · Score: 1

      I think the "oo" trumps the "k" in this case. But imagine the hilarity if someone were to cross-breed a Mook!
      --
      -Forrest Cameranesi, Geek of all Trades
      "I am Sam. Sam I am. I do not like trolls, flames, or spam."
    136. Re:Ah, but... by Anonymous Coward · · Score: 0

      >> I think the "oo" trumps the "k" in this case.

      > But imagine the hilarity if someone were to cross-breed a Mook!

      Sorry... the card says 'Moops.' :)

    137. Re:Ah, but... by MobileTatsu-NJG · · Score: 1

      There are ignorant Christians who like to argue, and ignorant atheists who like to argue as well. They're both equally infuriating to reasonable people. This would be a good time to point out that it's not very helpful to assume that a few noisy people represent a huge group of like-minded peeps. The relatively few extremists are the ones that'll demand the most attention. To use a neutral example: There are a few Star Wars fans that think George Lucas is an inerrorable god. That doesn't mean that everybody who likes Star Wars would go to such an extreme.
      --

      "I like to lick butts!" by MobileTatsu-NJG (#32700246) (Score:5, Informative)

    138. Re:Ah, but... by arminw · · Score: 1

      .....Still makes just as much sense, and is just as believable.......

      Indeed true! That's why, at the core, science is just as much based, at the root, on FAITH. Human rules or laws come from human minds. So then what MIND thought up the laws of nature? You can give that Mind any name you wish. Call it evolution maybe even. There is no way science can observe the existence or non-existence of this Mind. Evidently, this Mind doesn't want to be proven, but rather BELIEVED and trusted.

      All children tend to believe their parents and other adults they get to know. Only after they have been lied to by someone they initially trusted, especially by someone who hates or dislikes a parent, do they become doubters and distrustful. They may even come to hate their parents, though these may have done an above average job in their parenting.

      In Genesis we read about the first parent, God. There too, the kids first trusted their parent. We are told that another entity came and lied to these children of God and they believed the lie. Most of mankind still believes the lie about their Creator. The central idea of this lie is that man is an independent, sovereign creature in no way accountable to or dependent on a higher Power, their Creator and ultimate parent.

      Goebbels once said: "If a lie is bold enough, outrageous enough and repeated loud and often enough, then those who believe that lie will believe it to be the truth.

      --
      All theory is gray
    139. Re:Ah, but... by kurzweilfreak · · Score: 1

      Goebbels once said: "If a lie is bold enough, outrageous enough and repeated loud and often enough, then those who believe that lie will believe it to be the truth.

      Hence, religion. Obviously you completely missed the point of the replacement. Just because we have the ability to comprehend, doesn't mean that some uber intelligence must've made things specifically so that we can comprehend them. If, as you say, "There is no way science can observe the existence or non-existence of this Mind," then said Mind by default, for all intents and purposes, doesn't exist. Yet, despite the fact that you just said that there's no way this supposed Mind can't possibly be detected even in principle, you somehow want to bullshit your way into saying that despite all this you can know what this Mind who doesn't exist wants. Special cause fallacy applies of course. God, whoops, I mean, Mind created the rules since rules need a rule maker. So who created the Mind? It doesn't need a creator? Then why do the rules/universe?

      And call it evolution? If you want to expand your definition of God so widely that it can be equivalent to any arbitrary definition you want, you've rendered the word and concept meaningless. If God = evolution, then let's just call it evolution and be done with it. Why try to tack on some unnecessary supernatural bullshit for no reason except that it makes you feel good and gives you something to justify your own righteousness with?

      --

      kurzweil_freak

      5th Kyu Genbukan Ninpo/KJJR student

      Be the darkness that allows the light to shine.

    140. Re:Ah, but... by ajs318 · · Score: 1

      OK, then. Intrinsic properties and behaviours of things, and the inevitable, predictable and repeatable effects of actions to which they lead directly.

      --
      Je fume. Tu fumes. Nous fûmes!
    141. Re:Ah, but... by thomas.galvin · · Score: 1

      Also, there's no reason to have faith in this. Leave faith to the religious folks--these are facts, which are true whether or not you 'believe' them. While I agree that facts are true whether or not we acknowledge so, I would also comment that believing something to be a fact does not make it one.

      All progress depends on the notion that we might be wrong. And this is true for both sides of the fence: I play more in the religious pool than the science one. If Darwin had had faith in the facts of his day, he would never have come up with his theory of evolution, and if Luther had believed the facts of his day, we would all be chanting in Latin and gagging on incense.

      The true goal of science and the true goal of religion are the same: arrive at truth. Unfortunately, there are people on both sides that want to use their chosen craft not to further knowledge or the search for truth, but to establish their position as the "correct" one.
    142. Re:Ah, but... by tgibbs · · Score: 1

      I am close to agreeing with you, but with a slightly different paradigm (sorry about the PHB word, but I feel it best expresses the concept.) I do not think that a mechanism exists for increasing the likelihood of mutations in a certain region of DNA. What does exist are mechanisms to prevent mutations and to repair damage done to segments of DNA. Assuming that natural selection works on the level of the gene, it would logically follow that protection and repair mechanisms would be themselves adapted to specialize on regions of DNA which are the most likely to cause problems when mutations arise. Those regions which allow for stepwise evolution would therefore not be protected with the same intensity as those regions in which mutations would be fatal.


      I think that you could have positive or negative control of mutation frequency, but my bet would be a combination of both. However, it would be tricky to evolve non-protection of regions required for stepwise evolution, because in most cases, past history is no predictor of future performance--i.e. there is no way for evolution to anticipate what mutations will be required to adapt to a change in the environment. Another possibility is a general relaxation of fidelity of replication/repair when an organism is under stress. This is the sort of thing that could happen "automatically" as proofreading is an energy-requiring process.

      In your post, however, I did notice one fairly important misunderstanding of the mechanisms for evolution. Your statement that if (a mutation)is favorable, why was it not retained in... ignores the temporal aspect of evolution, in that the environment changes. Evolution selects for traits (and therefore gene sequences which allow for expressions of those traits) based on the suitability of the environment that the organism lives in. What might be favorable in one place spatially or temporally might be harmful to the organisms success under different circumstances.


      Correct. This is my point. What is the selective pressure for an organism to "remember" (in the form of increased rate of mutagenesis) those loci where mutation has been beneficial in an environment that no longer obtains? If the same circumstances recur frequently, there would be selective pressure favoring organisms prone to mutations in the specific regions required to adapt to those particular circumstances. But this is a crude, highly inefficient mechanism that really only makes sense for microorganisms with tight constraints on genome size. For organisms with more genomic storage space, there would be a strong selective advantage to organisms that duplicated the sequence in question and retained both copies--initially under leaky control, subsequently evolving regulatory mechanisms to activate the appropriate genes or splice variants when circumstances demand.

      Evolution does not even need to rely on external environmental change to stimulate genetic change, as certain gene combinations may have a synergistic (again, sorry for the PHB term) effect in which one is really not that beneficial unless the other exists. In other circumstances, a potentially deleterious mutation can give some benefit such as being a heterozygous carrier for sickle cell anemia giving increased resistance to malaria.


      However, in the absence of environmental change, the population will eventually approach some "satisfized" local optimum or cycle, from which it will escape only as a low probability event, unless there is external perturbation from the environment--e.g. a parasite such as malaria.
    143. Re:Ah, but... by ajs318 · · Score: 1

      So then what MIND thought up the laws of nature?
      There's no saying that they had to be thought up by a mind. Intrinsic behaviours just are {he argued circularly}.

      Anyway, any mind that existed would have to be obeying some set of laws which already existed. The only solution to the infinite regression is that the laws must have existed completely before any mind could exist; and since merely existing would be making use of the laws, the mind would not have to think them up.

      There is a strong temptation is to think in anthropomorphic terms, but it is a mistake to do so in this case. Something doesn't have to be actually imagined to be capable of existing; but as far as we humans are concerned, if we have never imagined it then we would never recognise it if it did exist. The mistake is supposing that the laws of nature are the product of a mind at all. It can only make sense for them not to be.
      --
      Je fume. Tu fumes. Nous fûmes!
    144. Re:Ah, but... by Lemmy+Caution · · Score: 1

      There's a difference between simple passive belief and actively working to bring about a state of affairs, capisci? And between them, there's a sub-category of "should" beliefs, as well. But, you're being intentionally dense here.

    145. Re:Ah, but... by Anonymous Coward · · Score: 0

      > There's a difference between simple passive belief and actively working to bring about a state of affairs, capisci?

      "Are you trying to say 'capisce?' Don't do that. Hurts my ears when you say it."

      I suggest you read Note 7 from this chapter of Dawkins's The Selfish Gene if you think beliefs themselves are beyond criticism, and cannot make someone your enemy.

    146. Re:Ah, but... by BadIdea · · Score: 1

      Actually, the article is pretty confusing on this, so I wouldn't jump to conclusions as to what it was actually talking about. It sounds, as best I can tell, that they were gauging the neutral theory of molecular evolution against stronger selectionist ideas. This IS an area of open research interest, though these two ideas are not mutually exclusive, and most biologists think they are compatible and complementary.

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
    147. Re:Ah, but... by shellbeach · · Score: 1

      Hume says it smarterer than I can Well, Hume certainly says it more verbosely than you! Mr Hume needed the hand of a good editor, I reckon ... (My favourite quote in the piece (towards the end, many thousands of needless words already written) was this: "BUT to hasten to a conclusion of this argument, which is already drawn out to too great a length ..." Never was a truer word spoken!)

      but basically, no. Scientific endeavor is based on faith in the concept of "cause and effect," which we can never have any (non-circular) reason for believing. You can only "prove to yourself" facts about DNA, et cetera if you're already willing to make a boatload of assumptions about the nature of the Universe. Ah, but Science can never prove facts, it can only say that the current evidence points to a hypothesis being correct. Note that this is very different to a proof in the mathematical sense, in which a theorem can be shown to be categorically and universally true and correct. In science, there is always an element of doubt. Likewise, we can't prove the concept of "cause and effect" -- things could happen completely randomly and by chance fit in with our world view. But what we can say is that, on the basis of the current evidence, a "cause and effect" model is the most likely situation for the universe.

      I'm pretty sure, from trying to skim that immense Hume article that you linked to, that that's the gist of his own argument anyway (though I gather that Hume's writing was so dense/incomprehensible/random (I'd pick the last one myself) that no two philosophers have been able to agree about what he meant since ...). But note that a statement of probability is very, very different to one of faith. Science can at least admit and discuss the probable errors in a prediction, and that very acceptance of fallibility is what gives science its power.
    148. Re:Ah, but... by bshensky · · Score: 1


      You have too much time on your hands, and I thank you for your contribution.

      --
      Makin' money, makin' friends, makin' whoopee and wearin' Depends
    149. Re:Ah, but... by Lemmy+Caution · · Score: 1

      Memetics (which, IMO, is a crude application of evolutionary psychology to the realm of culture, but I'll play along) explains why different beliefs from your own may actually work in your own interests. Beliefs aren't atomic and isolated, but work within the contexts of other systems of practice and environment, and just like a certain amount of homosexuality in a population may actually benefit everyone in that population, a certain amount of belief in God, in teleology, etc. may also benefit the population at large.

      Besides, even if you did some complete identification with your own beliefs such that you considered their prosperity the same as your own, a meta-meme about memes that didn't frame holders of other memes as "enemies" (particularly absent the ability or intention to remove them from the gene and meme pool) would probably be more adaptive. The irony is, you and I hold similar memes about God and religion, but different meta-memes. (Going further along this line will push us to the breaking point of the meme-idea, because thought is a process and a behavior, not a property or unit.)

    150. Re:Ah, but... by BadIdea · · Score: 1

      Polls say otherwise. A substantial MAJORITY of people in the US are creationists in the sense that they think that evolution is incompatible with the Bible (i.e. the true history)

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
    151. Re:Ah, but... by BadIdea · · Score: 1

      Actually, the article sort of sucks, so don't fault folks for getting the wrong impression from it. The real paper's summary section is a heck of a lot more clear (if drier and less overdramatic) than the article.

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
    152. Re:Ah, but... by susano_otter · · Score: 1

      Forgive me for not caring two figs for a USA Today poll.

      But even allowing that the poll is correct, the reference.com definition of "creationism" is still too narrow, in that it objectively fails to account for the wide range of beliefs held by a wide range of creationists.

      --

      Any sufficiently well-organized community is indistinguishable from Government.

    153. Re:Ah, but... by WgT2 · · Score: 1

      ...faith in experience...

      What an excellent response (and helpful as well).

      So, what does 'faith in experience' imply concerning those who have an 'experience of faith' (in that which is beyond science, such as religion)? Is their experience void because it cannot be confirmed by science? Are they liars? Are they mistaken? Are they crazy? Though those are rhetorical questions, it is possible that some are.

      But what of the rest?

      To continue with the use of tomorrow: will not tomorrow, as in 'the future' near or otherwise, prove what is fact; in particular if what the religious say is true, regardless as to whether one lives to even see tomorrow?

    154. Re:Ah, but... by WgT2 · · Score: 1

      (That explains the 'Geocentric' babblings from another response.) But, no, that wasn't the trap.

      Well, despite past performance, it is not a fact... until, in this case, the event happens.

    155. Re:Ah, but... by WgT2 · · Score: 1

      The English use of 'tomorrow' has nothing to do with Sun. Tomorrow begins at 12:00 a.m. (when the Sun isn't shinning in England - from wince we garner the previously mentioned language).

      Once Midnight passes, whether there will be a sunrise 'tomorrow' or not is a matter of faith, albeit based on past performance. That is, until the event happens (or doesn't).

      And don't both with your arguing over the use of 'rise' to describe something that is common vernacular in the English language. Just go look up 'sunrise' and you know what I mean.

    156. Re:Ah, but... by WgT2 · · Score: 1

      http://dictionary.reference.com/search?q=tomorrow&x=0&y=0

      Stop making up your own definitions. What are you, a Democrat?

      You took an easy question, posed in the simplest vernacular, and imagined yourself wise.

      Here's the question again, for your sake:

      Is it fact or faith that the Sun will rise on/for you tomorrow?
    157. Re:Ah, but... by WgT2 · · Score: 1

      The question wasn't about 'centrism'.

      It was about faith and whether you knew you had it or not.

    158. Re:Ah, but... by WgT2 · · Score: 1

      Why do you go about pretending to redefine 'faith'?

      Even the first two definitions thereof at Dictionary.com have no mention of a Deity. Check it out:

      1. confidence or trust in a person or thing: faith in another's ability.
      2. belief that is not based on proof: He had faith that the hypothesis would be substantiated by fact.

      Your use of the word assumption is but #5: arrogance; presumption".

    159. Re:Ah, but... by WgT2 · · Score: 1

      Are easily distracted by that which does not apply to you?

      Fact or faith:

      Will there be a sunrise for you tomorrow?

      Hint: http://dictionary.reference.com/search?q=faith (just read the first two).

    160. Re:Ah, but... by cas2000 · · Score: 1

      attempts to "prove" that science is just another religion are always trivially easy to debunk - that's because the people pushing the propaganda don't understand what science actually is or how it works.

      > Scientific endeavor is based on faith in the concept of "cause and effect,"
      > which we can never have any (non-circular) reason for believing.


      another, more scientific, way of looking at it is that 'cause and effect' is a scientific theory which has a lot of evidence to support it.

      in the absence of a better theory which more adequately explains what we observe, it's reasonable to assume that it is correct. i.e. exactly the same as any other well-accepted theory.

    161. Re:Ah, but... by Chapter80 · · Score: 1
      You should have used your own "reference.com" technique to continue your research and confirm what I said. http://dictionary.reference.com/search?q=day

      you took a simple joke and imagined yourself wiser.

    162. Re:Ah, but... by meringuoid · · Score: 1
      There are those of us that believed that it the selection of traits was deterministic, and then there are ... creationists. Those that are in between don't make up a significant population in the scientific community.

      An unfortunately composed sentence; you've implied there that creationists do make up a significant population in the scientific community :-)

      --
      Real Daleks don't climb stairs - they level the building.
    163. Re:Ah, but... by BadIdea · · Score: 1

      It's consistent with every other poll on the subject. You can talk about different kinds of creationism, but the classic evolution denying kind is clearly no tiny minority: it's a majority. I mean, around 44% of Americans believe that the world is only a matter of 10,000 years old or less, right off the bat. That's not subtlety speaking. And really, the only types of creationism that are scientifically sensible are the range from theistic evolution to deism, which virtually no one means to include when they talk about "creationism" (they often don't even mean to include ID, which is fiercely opposed to theistic evolution), and is a very small number of people (mostly practicing scientists who are religious and philosophers).

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
    164. Re:Ah, but... by BadIdea · · Score: 1

      Well, not so fast. Ben Stein, current pimp for ID in his new movie, seems to imply just that in some of his interviews: he talks about cells "intelligently" deciding how to change their DNA. Sounds like something he garbled out of either mainstream science (in which there are all sorts of mechanisms, though not intelligent ones, that change DNA in particular ways) or out of his many talks with ID theorists: so that idea may well now be part of their mix. Bottom line is that these guys will latch on to just about anything as long as it has the words "intelligent" and "evolution is wrong" in there somewhere.

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
    165. Re:Ah, but... by BadIdea · · Score: 1

      Actually, I don't think the researchers were doing or trying to do anything of the sort. The article seems to have misrepresented their work.

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
    166. Re:Ah, but... by BadIdea · · Score: 1

      Er, I'm not sure the actual paper says anything about mutations directly, or even could, considering their methodology. What they observed were the traits and their genetic makeup of current species, not those species who may have had mutations that didn't last until the present. What they were looking for seems to be something very different from what the article implies. They wanted to see how selection biased a highly conserved feature was compared to what we normally assume is random drift over time. But even random drift is not the same thing as all random mutations being preserved for observation.

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
    167. Re:Ah, but... by aproposofwhat · · Score: 1

      How do we KNOW that the world around us is "real" and not just an extended illusion, or dream, or computer simulation?

      A better phrasing of the question would be 'How could we know...?'

      If we could concieve of an experiment that would tell us which of the competing notions is true, then the question is worth asking.

      Contrariwise, if there is no wat to test the competing notions, then the question is meaningless (at least until someone invents such a test - just because nobody has thought of the test does not mean that no test could possibly exist).

      Currently, the question is meaningless, as all attempts to answer it have led to the inclusion of transcendental entities in their arguments, which is bad philosophy and even worse science.

      --
      One swallow does not a fellatrix make
    168. Re:Ah, but... by aproposofwhat · · Score: 1

      So then what MIND thought up the laws of nature? You can give that Mind any name you wish. Call it evolution maybe even. There is no way science can observe the existence or non-existence of this Mind. Evidently, this Mind doesn't want to be proven, but rather BELIEVED and trusted.

      Another fallacy from the religious crowd

      The idea of 'laws of nature' is merely shorthand for 'Nature behaves in a way that can be modelled using mathematics, and this modelling leads to a set of general principles that are analogous to laws in human societies'.

      There are no laws of nature, at least in the sense of laws imposed on nature as human laws are imposed on society.

      Thus the question of a 'mind' conceiving of those laws has no meaning, since the 'laws' in question are just a convenient, anthropomorphic way of viewing the model that science has given us.

      There is no 'Mind', and it is therefore meaningless to speculate on what that 'Mind' might want.

      You believe away if you want to, but since your entire belief is based on a logical fallacy, don't expect me to respect your primitive nonsense.

      --
      One swallow does not a fellatrix make
    169. Re:Ah, but... by WgT2 · · Score: 1

      I didn't use the word 'day'.

      Your attempt at my technique failed.

    170. Re:Ah, but... by arminw · · Score: 0, Flamebait

      .....There is no 'Mind', and it is therefore meaningless to speculate on what that 'Mind' might want.......

      You don't KNOW that, but you believe it because you WANT to believe that there is no God. You hope it lets you out of your responsibility to Him as your Creator.

      I do respect your decision to reject God. God has given you the freedom to reject Him. He could have made us like a deterministic, highly intelligent computer, but then we would not be capable of love. You know that if suddenly there appeared on you computer screen: "I love you --- (your name)" that someone was messing with that computer and that it means nothing to you. On the other hand if your spouse or child expresses that love, you respond very differently. The computer doesn't have the capability of love. You do, first of all toward your fellow humans and by extension toward God. All this has nothing to do with religion, but how we are all wired. When someone expresses this love by sacrificing his/her life, they are acting against all principles of "the survival of the fittest" as formulated by Darwin.

      Maybe, if you live long enough, you'll begin to understand that there is more to life than science can explore and reduce to a mathematical formula.

      --
      All theory is gray
    171. Re:Ah, but... by Anonymous Coward · · Score: 0

      >> .....There is no 'Mind', and it is therefore meaningless to speculate on what that 'Mind' might want.......
      > You don't KNOW that, but you believe it because you WANT to believe that there is no God.

      "You don't KNOW there's a god, but you believe it because you WANT to believe there's a god." Turnabout is fair play.

      > I do respect your decision to reject God.

      But if you object to the above characterization of your belief, then how can you characterize his DISBELIEF that way? That's not respect.

      > You hope it lets you out of your responsibility to Him as your Creator.

      When HE tells me I have such a responsibility, I'll own up to it. When YOU tell me I have it, pardon me while I take a grain of salt with it.

      > He could have made us like a deterministic, highly intelligent computer, but then we would not be capable of love.

      Who's to say love can't be deterministic? We don't even know how to adequately describe love, let alone put any restrictions on it.

      > All this has nothing to do with religion, but how we are all wired.

      Something tells me you're not an expert on how we are "wired." Please correct me if I'm wrong.

      > When someone expresses this love by sacrificing his/her life, they are acting against all principles of "the survival of the fittest" as formulated by Darwin.

      Actually, altruism has been studied pretty well by evolutionists. There are many books on the subject.

    172. Re:Ah, but... by Chapter80 · · Score: 1
      I didn't say you used the word day.

      I didn't attempt your technique.

      You lose.

    173. Re:Ah, but... by justo · · Score: 1

      kant invented epistemiology? i think the buddhist abhidharma (science of the mind) schools beat him on that, and there are even earlier examples. for example, one western text: Buddhists, Brahmins, and Belief: Epistemology in South Asian Philosophy of Religion

      the buddhist madhyamaka schools of reasoning have long been known for detailed analytical reasonings and refutations on all assertions on the illusory nature of reality. and arguably clearer than kant. they do have a different slant, however: searching for the causes of suffering, and the sufferer himself; with a purpose of liberation though realization and direct experience of the non-dualistic true nature of mind.

    174. Re:Ah, but... by background+image · · Score: 1

      kant invented epistemiology? i think the buddhist abhidharma (science of the mind) schools beat him on that, and there are even earlier examples.

      Did I say that? No, I said "essentially invented epistemology as a separate area of study," which is quite a different thing. Philosophers of one stripe or another have been asking epistemological questions at least since we lived in caves...

    175. Re:Ah, but... by cretog8 · · Score: 1

      After reading your journal entry, I think I read your post here about the same way. What I'm saying is that, to use your analogy... if a brilliant engineer used "evolution" as a decompression algorithm to achieve particular organisms, then that's not evolution by natural selection.

      It might be empirically indistinguishable from evolution by natural selection until we get to interview the engineer. But if I compress and encrypt a file, decompressing and decrypting it is nothing like natural selection. That doesn't mean it's impossible. It just means it's not natural selection.

      I think that there's an effort to "get along" by denying that certain beliefs are essentially in conflict.

      The idea of evolution by natural selection isn't at odds with other forms of creationism--it wouldn't rule out an engineer/god setting up the rules for the universe as we might set up cellular automata to see how things work out.

    176. Re:Ah, but... by WgT2 · · Score: 1

      LOLZ

    177. Re:Ah, but... by martinX · · Score: 1

      Being Australia, beer is the currency of male conversation :-)

      And it was a fair dinkum existential crisis - didn't end well. Still, as that syphilitic mother's boy said 'that which doesn't kill me makes me stronger, and may only leave a few bruises'.

      --
      When they came for the communists, I said "He's next door. Take him away. Goddam commies."
    178. Re:Ah, but... by martinX · · Score: 1

      I remember it whenever I need to get my head out of the clouds. Or my arse.

      --
      When they came for the communists, I said "He's next door. Take him away. Goddam commies."
    179. Re:Ah, but... by lawpoop · · Score: 1

      Is the following a fact or faith? The Sun will rise tomorrow (whether over clouds or otherwise). What say ye? Neither, as the sun is stationary and therefore unable to rise. Perhaps the correct question to ask would be "As the Earth continues in it's daily rotation, will there be a sun in the sky tomorrow" If you're going to claim that it's inaccurate to say that "the sun will rise tomorrow", then you must realize it's just as silly to say that the sun will "be in the sky tomorrow". What, is the sun going to be in Earth's atmosphere tomorrow?

      If the sun will *appear* to be in the sky tomorrow, it can also *appear* to rise.
      --
      Computers are useless. They can only give you answers.
      -- Pablo Picasso
    180. Re:Ah, but... by Anonymous Coward · · Score: 0

      If you're going to claim that it's inaccurate to say that "the sun will rise tomorrow", then you must realize it's just as silly to say that the sun will "be in the sky tomorrow"

      Not really... the sun really is "in the sky," if you understand the word "sky" to mean that big volume of space which is not blocked from view by the Earth.

    181. Re:Ah, but... by ardle · · Score: 1

      Thanks for the interesting links!
      You're right, the article was misrepresented: the researchers were claiming to have experimental evidence that traits that survive tend to survive, basing this claim on a statistical analysis done with samples of what the nematode systems they studied had learnt over time ;-)

  2. yes by Anonymous Coward · · Score: 0

    it is determined by nature

  3. In other news... by Aranykai · · Score: 4, Insightful

    The Theory of Evolution is once again mistaken for Natural Selection of Advantageous Traits.

    --
    If sharing a song makes you a pirate, what do I have to share to be a ninja?
    1. Re:In other news... by SoupGuru · · Score: 2, Insightful

      Is there even a "Theory of Evolution"?

      I thought in science there are facts and then there are theories to explain those facts. In other words, there is the fact that thing evolve and the theory of natural selection explains how they evolve. So not only are we confusing the terms evolution and natural selection, we're misapplying the term "theory".

      --
      What doesn't kill you only delays the inevitable
    2. Re:In other news... by KublaiKhan · · Score: 1

      To be fair, they are related, and most laymen can't really tell the difference, given the extremely sad state of science reporting and whatnot.

      --
      In Xanadu did Kubla Khan
      A stately pleasure dome decree
    3. Re:In other news... by eepok · · Score: 1

      So what's the difference, then?

    4. Re:In other news... by Anonymous Coward · · Score: 1, Informative

      yes. Natural selection is the mechanism that determines what survives. The Theory of Evolution includes this, but also encompasses other factors including mutation and/or genetic drift which introduce the differing traits that are acted upon by natural selection.

    5. Re:In other news... by spun · · Score: 4, Informative

      The theory of evolution includes the theory of the selection of advantageous traits, plus methods for the acquisition of new traits, like mutation.

      --
      - None can love freedom heartily, but good men; the rest love not freedom, but license. -- John Milton
    6. Re:In other news... by Anonymous Coward · · Score: 0

      No. You are misapplying the word fact here. Replace it with the word data and things become clearer.

      Science operates on two levels, the concrete level of data, and abstractions of data (with explanatory and predictive value) called theory.

      So, while we may call common ancestry a fact in general terms, it is not a piece of data, ergo it is a theoretical statement.

      Evolution in and of it self means only change or progression so Darwin's theory should probably be called "evolution through natural selection".

    7. Re:In other news... by mdwh2 · · Score: 4, Informative

      You are correct in describing facts and theories, but "evolution" can refer to both. This article explains it well I think - Evolution is a Fact and a Theory.

    8. Re:In other news... by eepok · · Score: 1

      Thank you kindly for that clarification. =)

    9. Re:In other news... by moosesocks · · Score: 4, Interesting

      Natural selection can be easily verified in a laboratory setting, with reproducible results. Keep nuking bacteria, and eventually you'll wind up with a population that is more resilient to the doses of radiation that you're giving them. We can also statistically observe which DNA sequences are advantageous/disadvantageous. The evidence for natural selection is extensive and largely unambiguous.

      Evolution is part of the larger picture, and isn't really possible to test or reproduce, as it explains the consequences of natural selection. "Proving" evolution requires lots of indirect/consequential/incomplete evidence, and the extensive use of statistics (which helps indicate trends and correlations, but can't actually *prove* anything) to interpolate/extrapolate what evidence we have.

      It follows from logic that if species breed randomly, and the mutation doesn't greatly affect an organism's ability to reproduce, the short-term effects of natural selection won't propagate to the long-term, which leaves us with a paradoxical situation wherein Natural Selection is required for evolution to occur, but that the population dynamics associated with natural selection simultaneously prevent long-term evolution from occurring.

      The significance of this study is that we now have some evidence that the "species breed randomly" assumption might not necessarily have been a good one.

      As always, further study on the matter should be pursued.

      --
      -- If you try to fail and succeed, which have you done? - Uli's moose
    10. Re:In other news... by ILuvRamen · · Score: 0

      but don't forget, if evolution was random, all creatures would have non-detrimental but non-advantageous neutral traits that they developed randomly. And logically those traits would severely outnumber the amount of advantageous traits. Instead, all creatures seem to have are advantageous traits and no neutral ones
      I can't explain it but for humans it's not true for some reason. My family has genes where we don't grow all our wisdom teeth. Well how about that. 99.99% of other people don't have that gene but it doesn't really specifically help or not help me survive. Thus suggesting evolution is random. But then why don't other animals have random traits different than the rest that don't help or hurt its survival?

      --
      Google's Super Secret Search Algorithm: SELECT @search_results FROM internet WHERE @search_results = 'good'
    11. Re:In other news... by MyNymWasTaken · · Score: 1

      Evolution of the species is a fact - not a theory. The scientific theory commonly referred to as the "theory of evolution" is the theory of evolution through natural selection [of advantageous traits].

    12. Re:In other news... by someone1234 · · Score: 1

      This is not true.
      There are many 'dead end' gene sequences that don't decode anything, or anything useful.
      Or they just decode an eye or hair colour variation.

      --
      Patents Drive Free Software as Hurricanes Drive Construction Industry
    13. Re:In other news... by binpajama · · Score: 1

      In still other news, an exception to this process was found to occur in the neuronal wiring of ID proponents, where connections corresponding to increase in overall intelligence of the network were found to be strongly selected against.

    14. Re:In other news... by Eternauta3k · · Score: 1

      if evolution was random, all creatures would have non-detrimental but non-advantageous neutral traits that they developed randomly
      The genotype gets extremely small random changes, which won't necessarily affect the phenotype. And we do have lots of neutral mutations, but no one neutral mutation is very frequent partly because of Hardy Weinberg's principle.

      My family has genes where we don't grow all our wisdom teeth. Well how about that. 99.99% of other people don't have that gene but it doesn't really specifically help or not help me survive
      Say one person has that weird teeth trait. That means an extremely small percentage of people (one in 7 billion) have it. The only way for that percentage to grow is for the trait to have some kind of advantage. Otherwise, people without the gene will multiply at the same rate as people with it, and the frequency remains constant.
      That took a long time to think
      --
      Yeah. Would you choose a neurosurgeon who pokes around people's brains in his spare time? I wouldn't.
    15. Re:In other news... by milsoRgen · · Score: 1

      There are many 'dead end' gene sequences that don't decode anything, or anything useful. That we currently know of. That's not to say we might find a reason for all those seemingly benign DNA sequences in various species.
      --
      I'm sick of following my dreams. I'm just going to ask where they're goin' and hook up with 'em later.
    16. Re:In other news... by TopSpin · · Score: 1

      In other news... Researchers develop revolutionary hair splitting device. "We have developed a technology that precisely subdivides a human hair up to 18 times lengthwise", said researchers at the Seymour Skinner Institute for Pedantry.

      --
      Lurking at the bottom of the gravity well, getting old
    17. Re:In other news... by sholden · · Score: 1

      Evolution in and of it self means only change or progression so Darwin's theory should probably be called "evolution through natural selection".

      Or maybe even "the Origin of Species by Means of Natural Selection".

    18. Re:In other news... by ILuvRamen · · Score: 0

      I don't care about those. I mean the ones that actually do something. There should be genes that do something that don't do anything important. And in both humans and animals hair and eye color affect reproduction rates greatly. Humans are hard wired to prefer non-dark colored irises because then you can see when someone's pupils are dilated and they're interested in you. And hair color usually turns into some picky thing in animals where the brightest or the darkest one is more attractive not to mention the whole darker they are, harder they are to find and eat thing. And in humans we're wired to like lighter colored hair because it implies a younger age than an aged adult.

      --
      Google's Super Secret Search Algorithm: SELECT @search_results FROM internet WHERE @search_results = 'good'
    19. Re:In other news... by LordLucless · · Score: 1

      Humans are a bit of an odd case in regards to evolution, since we have the technology to correct, to some extent, inferior genetic traits.

      For instance, in your case, not growing wisdom teeth is probably a genetic advantage, as they seem to often go wrong, cause pain, etc. However, with modern dentistry, that can be fixed without too much trouble, and will probably not have a significant impact on your chances to reproduce (which is, remember, the deciding factor for retaining/eliminating traits - not whether they are "good" or "bad"). There are numerous examples of traits like this.

      Also, remember that evolution is a product of both time, and environment. Especially in modern times, our environment changes damn quickly. It may be that wisdom teeth were useful at some stage in human development. Possibly, before we learnt about oral hygiene, it was useful to have a few more teeth grow later in life. Or perhaps there were certain foods that were more easily masticated by the larger teeth, that modern society has either foregon, or processed into a more manageable form. It may be that wisdom teeth were once useful for survival (and thus, selected) and now are not. They still won't be selected against though, until the having of them impacts chance to reproduce - so we'll probably retain them, though useless, for a good long while.

      --
      Just because you're paranoid doesn't mean there isn't an invisible demon about to eat your face
    20. Re:In other news... by LordLucless · · Score: 1

      You're probably still being to general. That species evolve is a fact. The extent to which their current state is due to evolution is not.

      --
      Just because you're paranoid doesn't mean there isn't an invisible demon about to eat your face
    21. Re:In other news... by someone1234 · · Score: 1

      Since you talked about animals, i meant fur/eye color in animals.
      Look at dogs and cats to get an idea.

      If you wonder why wild animals are not so variable, then think about that every little thing that is 'doing something, but nothing serious', might still affect the survival ratio of the given bloodline.

      For humans you see a bigger variation, because human intelligence/society keeps the less viable entities alive.

      --
      Patents Drive Free Software as Hurricanes Drive Construction Industry
    22. Re:In other news... by Anonymous Coward · · Score: 0

      "...the population dynamics associated with natural selection simultaneously prevent long-term evolution from occurring."

      Umm...no dude. Mutation continually produces new alleles and therefore new phenotypes to be acted on by natural selection. This process is indefinite.

  4. Thus eliminating the usual trite rhetoric by KublaiKhan · · Score: 3, Interesting

    Hopefully this will be an effective means of shutting up the old saw of "there's no way that 'simple random chance' could produce the creatures of today from the creatures of yesterday!" and all that other nonsense.

    O'course, it'll probably be misquoted endlessly by the 'intelligent design' folks, given that--at least superficially--it could be seen to "endorse" the concept of a directed design, rather than being an inevitable consequence of the process.

    --
    In Xanadu did Kubla Khan
    A stately pleasure dome decree
    1. Re:Thus eliminating the usual trite rhetoric by EggyToast · · Score: 1

      Hopefully this will be an effective means of shutting up the old saw of "there's no way that 'simple random chance' could produce the creatures of today from the creatures of yesterday!"

      What do you mean? They were right!

    2. Re:Thus eliminating the usual trite rhetoric by KublaiKhan · · Score: 1

      Yes, yes, I do get the joke--but I'd like to note that said argument is an offshoot of a misstatement of evolution as being "purely the result of random chance" and that any sort of 'direction' must necessarily be divinely inspired, rather than being a thermodynamic inevitability.

      --
      In Xanadu did Kubla Khan
      A stately pleasure dome decree
    3. Re:Thus eliminating the usual trite rhetoric by ChromeAeonium · · Score: 2, Insightful

      I doubt this will change anyone's opinion of anything because this article doesn't appear to be saying much, just that mutations in a nematode's sex organs tend to be beneficial. Really, to claim that mutations in general have a trend to be helpful after only a single study of a single part of a single organism seems to be stretching it to me.

    4. Re:Thus eliminating the usual trite rhetoric by pitchpipe · · Score: 0

      Actually, this could be a double blow to the IDers. This finding not only shuts up the argument that ""there's no way that 'simple random chance' could produce the creatures of today," it also gives them something to make evolution more palatable to their religious beliefs. "If it's not random, god must have a hand in it." This in turn could destroy the movement to get intelligent design taught in the science classroom, but I may be hoping for too much.

      --
      Look where all this talking got us, baby.
    5. Re:Thus eliminating the usual trite rhetoric by Anonymous Coward · · Score: 0

      Uh no, actually you're just a fucking idiot. Fortunately, you're a fucking idiot weighing in on the more reasonable side of an argument; unfortunately, you're doing the reasonable side a disservice with your mewling incompetence.

      This won't shut up 'that old saw'. This proves 'that old saw'. Just because you're a fucking idiot doesn't mean bringing creationists and intelligent design up will excuse your blunder. Black isn't white, whether you believe in God or Darwin.

    6. Re:Thus eliminating the usual trite rhetoric by dbIII · · Score: 1, Troll
      They don't want a reason, they already have one.

      It's all too hard and the God ate their homework.

    7. Re:Thus eliminating the usual trite rhetoric by Dun+Malg · · Score: 1

      ...the God ate their homework. "Der Gott hat meine heimarbeit gegessen" just doesn't have the same humorous ring as "Der hund hat meine heimarbeit gefressen".

      Seriously, try the latter on some Germans. They will either be confused, or laugh hysterically. They've never heard that one because in Germany, apparently kids don't make excuses, they just do their homework!
      --
      If a job's not worth doing, it's not worth doing right.
    8. Re:Thus eliminating the usual trite rhetoric by theNeophile · · Score: 1

      This won't shut up 'that old saw'. Yes, it will, because it exposes it for the straw-man it is. The slight ambiguity of what he said, when it's clear that he meant "stop its use as an argument", doesn't make him a "fucking idiot". Your intentional misinterpretation of his statement is your own problem, not his.
    9. Re:Thus eliminating the usual trite rhetoric by BadIdea · · Score: 1

      Actually, I'm pretty sure this experiment, while confirming evolution as pretty much every other such study does, wasn't actually about that at all. The article is misrepresenting the debate: it's almost certainly one between strong selectionists and advocates of the neutral theory, which is really more of a technical debate over genetics than anything having to do with confirming or disconfirming Darwin. I tried to parse through these issues here.

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
  5. God Recycles by usul294 · · Score: 3, Funny

    Creationist Interpretation : "God came up with something he liked, so he repeated his design; I mean it must have taken awhile to design millions of organisms, He must have recycled ideas somewhere"

    1. Re:God Recycles by tempest69 · · Score: 4, Insightful

      Creationist Interpretation : "God came up with something he liked, so he repeated his design; I mean it must have taken awhile to design millions of organisms, He must have recycled ideas somewhere"

      Whats really intresting then is that while a whole bunch of stuff is recycled, the pattern makes a tree where recycling never seems to occur among plants-mammals-birds, so no four cycle breathing for mammals, no bird milk, no bat fruit.. really strange that with all the shortcuts that were taken, so much separation would be faithfully preserved.


      Storm

    2. Re:God Recycles by susano_otter · · Score: 2, Insightful

      You really haven't ever bothered to consider the implications of the "creationist" theory, have you?

      If the universe is the creation of a being that transcends time and space, then there's no tedium involved in the design process because there's no time involved in the design process. Any "recycling" of ideas would have occurred for other reasons. As to what those reasons might be, a more likely "creationist" interpretation would be that in realm where time and space have no meaning, how can we possibly figure out the whys and wherefores of things (traditionally, "God works in mysterious ways").

      --

      Any sufficiently well-organized community is indistinguishable from Government.

    3. Re:God Recycles by Anonymous Coward · · Score: 0

      But we did get fruit bats :)

    4. Re:God Recycles by Anonymous Coward · · Score: 2, Funny

      Whats really intresting then is that while a whole bunch of stuff is recycled, the pattern makes a tree where recycling never seems to occur among plants-mammals-birds, so no four cycle breathing for mammals, no bird milk, no bat fruit.. really strange that with all the shortcuts that were taken, so much separation would be faithfully preserved. Please explain the platypus.

    5. Re:God Recycles by Nimey · · Score: 3, Funny

      Shut up.

          -- GOD

      --
      Hail Eris, full of mischief...

      E pluribus sanguinem
    6. Re:God Recycles by Anonymous Coward · · Score: 0

      I can explain this.

      Bush is close to god. Bush outsources everything. Therefore God outsourced everything.

      The phylogentic tree is actually a map of how creation was outsourced through various heavenly entities.

    7. Re:God Recycles by tietokone-olmi · · Score: 1

      Actually there is such a thing as bird milk. It's not produced by lactation though and definitely not from a nipple, rather some species of bird secrete a fatty substance in their crops that's good for feeding really small chicks. The point being that mommy bird & daddy bird don't have to spend quite as much energy foraging when they can produce some of the sustenance their offspring require more directly. Especially if the chicks require food every two hours or something...

      Yeah, it's a bit of a stretch to call it "milk" as such, it's more of a chick feeding supplement or something like that. Most likely it was named for superficial similarity (i.e. offspring sustenance) with mammal milk.

    8. Re:God Recycles by toddestan · · Score: 1

      I mean it must have taken awhile to design millions of organisms, He must have recycled ideas somewhere

      Took a while? I was under the impression that it took him less than week.

  6. But... But... by Anonymous Coward · · Score: 0, Funny

    If evolution isn't random, then it must be through a predetermined pattern... ergo intelligent design is correct.
    Repent! Repent!!!

  7. Wait... what's different here? by eepok · · Score: 4, Informative

    Hmm... I don't understand...

    From what I picked up in bio, it was known to work as such:

    Assume Mutation
    (1) If mutation not hindrance, animal likely to live and likely makes babies.
    (2) If mutation is boon, animal more likely to live and more likely makes babies.
    (3) If mutation is hindrance, animal less likely to live and less likely to make babies

    From there, you consider whether or not the mutation is recessive/dominant which determines if the babies get the mutation (then referred to as a trait).

    Repeat many many times and you get a separation of a special line.

    The proper combination of factors being: mutation = beneficial, mutation dominant, mutated animals screw like proverbial rabbits.

    How is this different from the new findings?

    1. Re:Wait... what's different here? by AntiMotive · · Score: 2, Informative

      Different? No. Adding to a mountain of supporting data obtained through scientific measures? Yes. /2my2cents

    2. Re:Wait... what's different here? by eepok · · Score: 1

      I see...

    3. Re:Wait... what's different here? by NeutronCowboy · · Score: 2, Insightful

      The way I understood the article, observed mutations tended to be favorable to begin with. In other words, instead of the mutations being random, they are more likely to be favorable than unfavorable. So there seems to be some sort of mechanism that selects beneficial mutations BEFORE procreation or death kicks in. I'm not sure though if that's simple misreporting on the part of the author of the article.... wouldn't be the first time.

      --
      Those who can, do. Those who can't, sue.
    4. Re:Wait... what's different here? by kebes · · Score: 5, Insightful
      I was confused, too. Here's the reference to the actual paper:
      Karin Kiontke, Antoine Barrière, Irina Kolotuev, Benjamin Podbilewicz, Ralf Sommer, David H.A. Fitch, and Marie-Anne Félix Trends, Stasis, and Drift in the Evolution of Nematode Vulva Development Current Biology (November 2007), 17, p. 1925-1937.

      TFA seems to be misrepresenting the research somewhat. They claim that there is a divide in evolutionary theory between "random inheritance" and "deterministic inheritance." However, the actual article is describing the difference between unbiased (stochastic) and biased (selected or constrained) evolution of variation. In both cases the usual random genetic variation with fitness selection would occur.

      The scientists are not claiming that evolution is deterministic or guided, but rather that there are strong selections and constraints that bias some variations to be more likely to appear than others. In their words:

      We propose that developmental evolution is primarily governed by selection and/or selection-independent constraints, not stochastic processes such as drift in unconstrained phenotypic space.
      As an example of a constraint, they mention "generative constraints" (i.e. fitness is selecting for a certain feature, and there are multiple ways of achieving that feature, but one's genetic heritage will bias one implementation over another). Their evidence for the drift in variations being generally "biased" is based on the occurrence (over generations) of various traits: for instance they observe fewer "reversals" (reappearance of traits that were previously common) than would be expected if the variability were entirely stochastic/random.

      This is, in any case, my understanding of the paper... but I'm a chemist/physicist, not a biologist! (So hopefully a biologist in the crowd will further explain this paper.) Overall, however, I think the article doesn't summarize the work properly, since they are suggesting that evolution is highly directed and deterministic, whereas the paper is instead analyzing the "degree of bias" that is inherent to the selection effects of evolution. For instance, the scientific paper doesn't claim that evolution can't produce non-advantageous mutations.
    5. Re:Wait... what's different here? by Gat0r30y · · Score: 1

      Repeat many many times and you get a separation of a special line.
      Or perhaps not.... what I mean is that the trait may spread through the population, then speciation may occur through another method, such a geographical separation of a group (see Darwin's Finches). Or the trait may be so bad ass that it will spread through the whole population effectively leaving the entire species changed, but perhaps not different enough to call a new species.
      On to the matter at hand, I do not believe you interpret the finding correctly. It was a verification that Natural Selection is what drives evolution and not A Competing Theory (which ID folk is only a theory BECAUSE IT IS FALSIFIABLE as just happened). By random mutation in the offspring we would expect to see a wide variety of mutations, the idea was that over time, these sorts of random mutations would move the overall population toward whatever mutations were effective vs. Natural Selection, which is what you describe and what was verified by these folks (and was what I learned in high school bio too).
      --
      Prediction: The real iPhone killer is going to be sex robots from Japan. Think about it.
    6. Re:Wait... what's different here? by dasunt · · Score: 4, Interesting

      I've always thought that the rate of mutation should be alterable as well.

      Depending on the creature, it may take more effort or less effort to ensure the integrity of its DNA. Some creatures can take massive doses of radiation and survive, some can survive massive exposures to what would be carcigenic in humans, etc.

      So shouldn't evolution heuristically arrive at a rate of mutation that is beneficial to a species?

      I thought this was obvious, but maybe I should write a paper on it. :p

    7. Re:Wait... what's different here? by Alsee · · Score: 1

      The way I understood the article, observed mutations tended to be favorable to begin with... not sure though if that's simple misreporting on the part of the author

      The wording in the article rather bad and targeted at a low reading level, but I'm pretty sure that the trends they were talking about were were post-selection trends in the beneficial direction.

      It sounds like the researchers were merely debunking some crackpot suggestion that maybe there's a 50% chance some species' necks will get longer over time and a 50% chance they will get shorter, that all such changes are unselected random walks, and that is it unselected random drift that giraffes have such long necks. Doh.

      This article seriously falls into the "water is wet" category.

      -

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      - - You can't take something off the Internet! That's like trying to take pee out of a swimming pool.
    8. Re:Wait... what's different here? by snaz555 · · Score: 2, Insightful

      My rather layperson understanding is that the findings prove there are N-order effects in evolution. Given what we know about the complex interaction of genes and how they switch one and other off in complex networks, there are many layers of order where changes can occur, and conversely any one change could impart both, say, a bigger eye as well as a tendency to evolve say the skin in some direction. So you can have one immediately beneficial change, like a slightly tweaked eye, that takes hold quickly act to set up the species for other future directional changes -- or even 2-, 3-, or N-th order changes (like changes to the switching graph itself). Evolution also isn't centered around individual procreation. Clearly few ants or bees procreate, yet they are extremely successful as species. Evolution is about the success of the species, and can't be reduced to a 'fittest of the lineages' even in species where all or most individuals are genetically enabled to do so. Anyway, I'm sure a real geneticist or other professional in the field could really clue us in much better.

    9. Re:Wait... what's different here? by NeutronCowboy · · Score: 1

      Alright.... sounds most plausible. I've re-read the article a few times, and indeed - the more I read it, the more it does sound like a screw-up on the part of the journalist. Thanks for the input.

      --
      Those who can, do. Those who can't, sue.
    10. Re:Wait... what's different here? by Alsee · · Score: 2, Insightful

      From the artcle:
      An opposing theory says evolution takes place through randomly inherited and not necessarily advantageous changes. Using the giraffe example, there would not be a common neck-lengthening trend; some would develop long necks, while others would develop short ones.

      They were testing the alternate theory against standard theory.

      From what I picked up in bio, it was known to work as such:
      Assume Mutation
      (1) If mutation not hindrance, animal likely to live and likely makes babies.
      (2) If mutation is boon, animal more likely to live and more likely makes babies.
      (3) If mutation is hindrance, animal less likely to live and less likely to make babies


      Yeah. You described standard theory.

      The alternate theory did not accept (1), (2), and (3). Instead it suggested:
      (1) If mutation not hindrance, it's equally random what happens.
      (2) If mutation is boon, it's equally random what happens.
      (3) If mutation is hindrance, it's equally random what happens.

      Basically some genius proposed an "alternate theory" that if you throw a ball in the air, it won't fall down. These valiant researchers threw some balls up in the air to test that alternate theory against the standard theory of gravity.

      Major scientific results! The standard theory held up and the alternate was silly.

      Major scientific results! Anti-evolutionists who think evolution is "merely random and undirected" and therefore impossible to explain life on earth.... those people can most charitably be described as "uninformed" or "misinformed". I will leave the less charitable descriptions to your imagination.

      -

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      - - You can't take something off the Internet! That's like trying to take pee out of a swimming pool.
    11. Re:Wait... what's different here? by eepok · · Score: 1

      I think the article doesn't summarize the work properly, since they are suggesting that evolution is highly directed and deterministic, whereas the paper is instead analyzing the "degree of bias" that is inherent to the selection effects of evolution. For instance, the scientific paper doesn't claim that evolution can't produce non-advantageous mutations.

      That clears everything up.
    12. Re:Wait... what's different here? by Eternauta3k · · Score: 4, Informative

      So there seems to be some sort of mechanism that selects beneficial mutations BEFORE procreation or death kicks in
      You never see stuff like people with 2 alleles for sickle cell disease, because they don't make it to birth. Likewise, very bad mutations are selected against at a very early stage. However, mutations are random, there's no way for a cell to control where some cromosome will change.
      --
      Yeah. Would you choose a neurosurgeon who pokes around people's brains in his spare time? I wouldn't.
    13. Re:Wait... what's different here? by bckrispi · · Score: 1

      IANAB, but I believe the frequency of mutation is directly tied to the frequency of reproduction.

      --
      Xenon, where's my money? -Borno
    14. Re:Wait... what's different here? by samkass · · Score: 1

      Nope, the parent poster is closer to the truth. The frequency of mutation, the types of mutation that happen, and the likelihood that a mutation will affect anything at all are all determined by the genome. It is definitely possible to select for faster or slower genetic drift. And it's not a new theory that evolution has optimized for the genetic drift (and reproductive rates) that best matches the rate of change of our environment over the past million years.

      --
      E pluribus unum
    15. Re:Wait... what's different here? by Bueller_007 · · Score: 1

      "So shouldn't evolution heuristically arrive at a rate of mutation that is beneficial to a species?"

      Warning: informed but amateur understanding follows

      1) Evolution does not work for the good of the species. *Genes* are selected.
      2) The optimal mutation rate is precisely *zero* from the viewpoint of the gene. No gene "wants" to change. (In the sense that genes that tend to reduce their own copying fidelity tend to be driven out of the gene pool by the alleles that they become.)
      3) Even if a gene controlling mutation rates were to arise that increased the mutation rates of all genes *other than itself*, this gene would basically be an outlaw, promoting itself through the gene pool at the expense of all others. New genes that suppress the mutation-rate gene would be favoured in the gene pool, as they *promote their own copying fidelity*. Thus the mutation rate would tend back toward zero.

      Luckily for us, copying fidelity simply ISN'T perfect regardless of how perfect the genes want it to be, or evolution simply couldn't occur.

    16. Re:Wait... what's different here? by caramelcarrot · · Score: 1

      I remember seeing something about how the mutation rate of HIV is "on the edge" of survivability, if it mutated any faster, it would be unstable and unable to reliably reproduce. This gave some idea of somehow increasing the mutation rate significantly using drugs so that it just fails.

    17. Re:Wait... what's different here? by maxume · · Score: 1

      Sorry, no reference, but there is decent evidence that species can vary their mutation rate in response to their environment(so, not just radiation, but starvation, etc).

      --
      Nerd rage is the funniest rage.
    18. Re:Wait... what's different here? by evolvearth · · Score: 1

      It's about the ongoing debate on whether most evolution is actually neutral or selection. Basically, the neutral argument is that mutations arise and give rise to variation, and very little of that variation is subjected to selection. Selectionists believe that most mutations give rise to variations that are either selected for or against.

    19. Re:Wait... what's different here? by Anonymous Coward · · Score: 0

      Rate of mutation is "alterable", in the sense that it is a species-specific property. Its primarily a function of the proofreading efficiency of DNA polymerases.

    20. Re:Wait... what's different here? by Scrameustache · · Score: 1

      there's no way for a cell to control where some cromosome will change. Are you sure?
      Maybe cells that express specific portions of their chromosomes have a feedback mechanism to let the organism know if they're doing well or not, and maybe the organism isn't as careful in the replication process of that part of it's genome when the feedback is negative.
      --

      You can't take the sky from me...

    21. Re:Wait... what's different here? by Forzan · · Score: 1

      The evolutionary process occurs at the level of the individual due to forces acting against the individual, not at the level of the species due to the needs of the species to adapt. An individual's ability to produce varied offspring isn't the sort of trait that seems selectable for survival or reproduction, but an individual's ability to resist deadly forces in an environment is.

      And don't forget that the 'rate of mutation' is determined by how well a species resists mutation, coupled with ever changing environmental factors that cause mutation.

      Instead of writing a paper, maybe you should just read a few.

    22. Re:Wait... what's different here? by Anonymous Coward · · Score: 0

      That's how it's supposed to work. However, a recent study shows that humans are then "a special case" for evolution. J.C. Stanford's book Genetic Entropy & Mystery of the Genome has some insight into human evolution. I admit, have not read it but here comes interesting thing (please verify):

      Evolution (that is, natural selection) cannot remove all harmful mutations which occur in humans body. Therefore, our genome cripples over time.

    23. Re:Wait... what's different here? by Antique+Geekmeister · · Score: 1

      Well, not to a species: if the change alters it in such a way that is beneficial to individuals and creates a new species that can no longer interbreed with their peers, that's a benefit to the new species, not the old one.

      Mutation is also not a stable requirement. Big environmental changes can be of enormous benefit to particular species, or with particular mutations, but devastate others that have evolved over millions or billions of years. Look at the devastation to species when plants learned how to make oxygen, or after the dinosaur killer asteroid. You can't predict that kind of need for mutation, so in the meantime the species in the stable environment could evolve to survive in their stable world.

    24. Re:Wait... what's different here? by IngramJames · · Score: 1

      These valiant researchers threw some balls up in the air to test that alternate theory against the standard theory of gravity.

      Yes, but they didn't do it standing underneath a tree with low-hanging branches, did they? CONSPIRACY! CONSPIRACY!
      --
      'No rational religion claims "supernatural" exists, that's an atheist slander.' - seen on slashdot.
    25. Re:Wait... what's different here? by kanweg · · Score: 1

      No reference either, but varying the mutation rate is very easy. Cells have a correction facility when copying DNA, enzymes that proof-read the copied DNA. All a cell has to do is to suppress the expression of these proof-read enzymes and the mutation rate goes up (because errors are no longer corrected). If it does so in response to physical stress (lack of ATP or something), then you have a nice survival mechanism.

      Bert

    26. Re:Wait... what's different here? by BadIdea · · Score: 1

      Yep. The article does look all out of whack, claiming that the findings are a lot more dramatic and generalizable than they were intended to be. In any case, this paper is all about whether biased or unbiased selection of traits dominates, not absolutely proving that one thing or another is the case. The headline is ridiculous and the discussion of the results laughable... which is especially absurd given that the paper itself is much more clear about what they set out to test and what they found. One more reason that science bloggers are a way way better source of information about specialized work than most science "journalists."

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
    27. Re:Wait... what's different here? by Anonymous Coward · · Score: 0

      Actually it is not bad - but you have to generalize:

      Genes with the effect (somehow) of trending the mutation rate of its environment towards an optimum (assuming such exists) could thrive since that would translate to a positive effect for the gene itself.

      Forget "good for the species" - its all about "good for the gene", even while one way of being good for the gene can be to be good for the species.

      Please write the paper, but my advice is to do it from the "gene's eye perspective" (and perhaps read The Selfish Gene by R Dawkins to understand better what I'm on about)

    28. Re:Wait... what's different here? by Flammon · · Score: 1

      So this pretty much means that there is a creator, we are living in an experiment and the creator on occasion makes changes to our DNA. This might also explain the existence of super influential people like Jesus, Gandhi, Einstein, Hitler etc..

  8. wateriswet by mike2R · · Score: 1

    Seriously, I *promise* I tagged this wateriswet before I read the dept byline..

    --
    This sig all sigs devours
  9. Capt. Obvious by 75th+Trombone · · Score: 1

    from the water-also-wet dept.

    Gee, if you have to give it such a disparaging department name, then why even bother posting the article in the first place? Unless you have a fetish for the creation/evolution wars, which we all know is the best thing about Slashdot....

    --
    The United States of America: We do what we must because we can.
    1. Re:Capt. Obvious by PhxBlue · · Score: 1

      Unless you have a fetish for the creation/evolution wars, which we all know is the best thing about Slashdot....

      I take it you haven't witnessed the vi/emacs wars, then?

      --
      !#@%*)anks for hanging up the phone, dear.
    2. Re:Capt. Obvious by 75th+Trombone · · Score: 1

      I've been around since, oh, I dunno, 2002 or 2003, and I don't think I've once witnessed a real vi/emacs flamewar. I've witnessed about a million jokes about the vi vs. emacs holy war, along with quite a few snarky comments one way or the other, but never an actual argument, as far as I can remember.

      Maybe I'm just not paying enough attention. But I am paying enough attention to witness the bi- or triweekly creation/evolution smackdowns, and it's getting old, and I think they're the direct intent of the folks posting those articles in the first place.

      --
      The United States of America: We do what we must because we can.
    3. Re:Capt. Obvious by ipb · · Score: 1
      "I've been around since, oh, I dunno, 2002 or 2003, ..."

      My, you're awfully literate for a six year old.

  10. Am I missing something? by NeutronCowboy · · Score: 4, Interesting

    Somehow, I feel that this is indeed novel: as far as I understood it, evolution was taken to be the process by which RANDOM mutations are passed on based on how they affect survival and reproduction rates.

    This seems to say that the mutations aren't random, but that they are biased into a specific direction - one that is more advantageous to begin with. As an example, this would indicate that instead of there being random variations of the length of the neck of the giraffe, the mutations tend, on average, to favor a longer neck to begin with.

    I'd say that's pretty new and spiffy. Did I miss something?

    --
    Those who can, do. Those who can't, sue.
    1. Re:Am I missing something? by Derekloffin · · Score: 1

      Phrased like that, yeah, I think that would be rather novel and interesting, although I suppose it could be argued, it is still random, it's just skewed toward result X due to the current structure of the organism. We know, for instance, certain mutations are common causes of such things as cancer given a certain genetic make up. This could likely just be a more complex structural bias in the mutation patterns.

    2. Re:Am I missing something? by MightyMartian · · Score: 1

      But most mutations are not beneficial. The vast majority occur in non-coding junk DNA, and are neutral, at least in the short term.

      --
      The world's burning. Moped Jesus spotted on I50. Details at 11.
    3. Re:Am I missing something? by NeutronCowboy · · Score: 2, Insightful

      But that's the point of the article - most mutations seem to be beneficial, according to their sets of criteria. This is what I think is new in the article.... though I'm also suspicious that the journalist might have simply misunderstood the scientist. Wouldn't be the first time.

      --
      Those who can, do. Those who can't, sue.
    4. Re:Am I missing something? by NonSequor · · Score: 2, Informative

      The article makes it sound like this proves that natural selection isn't a stochastic process, but in a couple of places they contradict this. It wouldn't make sense for natural selection to be deterministic.

      My understanding of natural selection is that it's more or less a random walk with drift toward a point determined by the nature of the selection pressures. Reading between the lines, I'm guessing that this new research shows that the drift term of the process is much larger than the error term, not that there is no error term.

      The significance of this would be that if the error term were large enough, the process would be unlikely to converge to the point determined by the selective pressure.

      --
      My only political goal is to see to it that no political party achieves its goals.
    5. Re:Am I missing something? by Anonymous Coward · · Score: 0

      AKA "change is good."

    6. Re:Am I missing something? by flintknife · · Score: 1

      It is novel but they are really reaching to say that this implies that all evolution is not random. The study looked at nematode worm vaginas and found that they were more likely to mutate to develop traits already known to be successful than unsuccessful traits. Religious types are sure to fasten onto this as some kind of vindication of intelligent design. Keep in mind though that this is 1 body part in 1 really simple species. Unsuccessful mutations might be less likely because of a quirk of genetic development or the like. TFA doesn't give a lot of information, but drawing the conclusion that evolution is deterministic based on this study alone regardless of how strong their results are is really a stretch.

    7. Re:Am I missing something? by mdwh2 · · Score: 1

      I read the article as talking about how traits are passed on - whether they are selected randomly or not. Yes, changes introduced by mutation would be random, but that's a different issue.

    8. Re:Am I missing something? by IdahoEv · · Score: 2, Informative

      Mutation is partly random, but selection definitely is not. Genes and traits are selected for by their ability to pass themselves on to the next generation. That's a criterion, not "randomness".

      Note: mutation is definitely not always random, either. Organisms have developed extensive systems for modifying and altering how much mutation they incur, and what part of the genome receives those mutations. Look up, for example, the bacterial SOS response, in which bacterial colonies under stress will suddenly amplify their own mutation rate in the hopes that one or more of their member cells will "find a solution" to whatever the current stress and continue to survive. In addition, all organisms protect more critical parts of their genome from mutation to some degree. Truly important things like the region coding for ribosomal RNA and protein subunits tend to get very few mutations, because having a fucked-up ribosome is a death sentence.

      Evolution itself is subject to evolution, and has been crafted to be less than perfectly random.

      --
      I stole this sig from someone cleverer than me.
    9. Re:Am I missing something? by NeutronCowboy · · Score: 1

      From what I can tell, not only are they saying that the drift term is larger than the error term, but that the drift is not solely determined by the nature of the selection pressures. In other words, drift occurs before selection can impact the random walk. Yes/No?

      --
      Those who can, do. Those who can't, sue.
    10. Re:Am I missing something? by Chemicalscum · · Score: 1
      Yes you are missing something!

      They are not saying saying that mutations are not random. If mutations were not random this would require major changes in either biology or physics. What they are saying is that selection, not random drift in the developmental changes they were studying in nematode worms is the determining factor.

      What they concluded:

      We propose that developmental evolution is primarily governed by selection and/or selection-independent constraints, not stochastic processes such as drift in unconstrained phenotypic space.

      It is merely confirmation of the adaptationist program of modern evolutionary biology.

    11. Re:Am I missing something? by BadIdea · · Score: 1

      The article is definately out of whack. What they were measuring were the developments over time, not the mutations. In fact, there's no way to classify most mutations as beneficial or detrimental unless you actually sit and watch to see if they survive. Furthermore, from the actual paper it looks like this was a study of natural phylogeny, not sitting around watching generation after generation grow.

      --
      The Bad Idea Blog - Science, Skepticism, & Stupid
  11. Misleading title by Anonymous Coward · · Score: 1, Interesting

    From the abstract of the original article: "We propose that developmental evolution is primarily governed by selection and/or selection-independent constraints, not stochastic processes such as drift in unconstrained phenotypic space."

    The summary and title are misleading. http://www.current-biology.com/content/article/abstract?uid=PIIS0960982207021938

    Selection is deterministic, drift is random. This is really no news, other than for developmental question at hand, whether a variation observed can be explained through deterministic or stochastic process.

    1. Re:Misleading title by Anonymous Coward · · Score: 0

      "Deterministic" and "stochastic" are being used in a funny sense in that abstract. What they seem to mean is that, given certain expectations about how much diversity that purely "random" (meaning unbiased) drift would generate, the range variation that they actually observe is much lower than that theoretical expecation, which means that the process is "deterministic" (meaning biased). This is borne out by this quote from the abstract:

      We propose that developmental evolution is primarily governed by selection and/or selection-independent constraints, not stochastic processes such as drift in unconstrained phenotypic space.

      Of course, their "deterministic" process certainly has random parameters; the point is that the random parameters do no derail the evolutionary process from certain "roads" in a much broader terrain.

  12. I thought God... by ducomputergeek · · Score: 0, Offtopic

    ...not only plays dice, but sometimes throws them where we can't see?

    Or Does God use the same random number generator that XP does?
    I probably should have stopped after the first comment...

    --
    "The problem with socialism is eventually you run out of other people's money" - Thatcher.
  13. Most interesting by strange+dynamics · · Score: 5, Funny

    I think the most interesting thing to come to light in this study is that scientists have identified fourty characteristics of nematode sexual organs.

  14. Finally, there is an answer by eclectro · · Score: 3, Funny

    That it is a deterministic process that will tell how much wood would a wood chuck chuck if a wood chuck could chuck wood.

    They might even be able to write a mathematical expression for it.

    --
    Take the cheese to sickbay, the doctor should see it as soon as possible - B'Elanna Torres, "Learning Curve"
    1. Re:Finally, there is an answer by Endloser · · Score: 0

      if wood > totalWoodchucks eatAll else die

  15. interesting career choice by digitalderbs · · Score: 5, Funny

    measured changes in.. nematodes' sexual organs
    and I thought my job sucked.
    1. Re:interesting career choice by Anonymous Coward · · Score: 0

      Is that legal?

    2. Re:interesting career choice by Poromenos1 · · Score: 1

      Let me tell you, worm porn rules.

      --
      Send email from the afterlife! Write your e-will at Dead Man's Switch.
    3. Re:interesting career choice by Anonymous Coward · · Score: 0

      is it safe to assume that just before you're done with your job, someone else comes in to do the measuring?

    4. Re:interesting career choice by Anonymous Coward · · Score: 0

      researchers measured changes in 40 defined characteristics of the nematodes' sexual organs (including cell division patterns and the formation of specific cells)

      Ok so along with length and width that's 4. What are the other 36?

  16. Link to cited paper by Larthallor · · Score: 3, Informative
  17. Also Interesting... by Traiano · · Score: 1

    This topic is as much news to Slashdot readers as "Linux Shown to be a Viable Operating System" and "RIAA Aggressively Pursuing Pirates".

    1. Re:Also Interesting... by Anonymous Coward · · Score: 0

      What?!

      The RIAA is suing pirates?

  18. This is confused by ucblockhead · · Score: 1
    I can only presume whatever "journalist" who wrote that didn't understand what he was told.


    Darwinian natural selection has an element of randomness in that "natural selection" promotes those randomly produced mutations that increase the animal's likelihood of survival. Every other theory I've heard of assumes a *more* deterministic process.


    The key to understanding evolution by natural selection is understanding how the process of natural selection creates an ordered progression of animals better adapted to their environment using random mutation as the engine.

    --
    The cake is a pie
  19. The Recursive Nature of Life. by TheLazySci-FiAuthor · · Score: 2

    It sounds to me that life has evolved to evolve.

  20. Duh.... by mark-t · · Score: 1

    The reason it doesn't look random is because random mutations that aren't successful don't survive long enough in the first place, so of _COURSE_ the trend will always be towards more productive organisms.

  21. Couldn't one interpret "deterministic evolution".. by stratjakt · · Score: 0

    ... with a sort of intelligent design?

    --
    I don't need no instructions to know how to rock!!!!
  22. meh by ImTheDarkcyde · · Score: 1

    We still won't be seeing the "Law Of Evolution" anytime soon, though.

    1. Re:meh by skinfitz · · Score: 1

      People who believe in the god haven't even got a proper hypothesis yet.

    2. Re:meh by pwainwright · · Score: 1

      The god hypothesis is Not even wrong

  23. laymens terms? by !eopard · · Score: 1
    I had understood (in extremely basic layman terms):

    Natural selection is where you loose characteristics that are less able to compete. This is a loss of genetic information.

    Evolution is where you gain genetic information through mutation. Natural Selection dictates whether those mutations survive to become dominant or a separate species.

    If you have a better explanation I'd love to hear it though.

    --
    Boolean logic: True, False, and File not found.
    1. Re:laymens terms? by repapetilto · · Score: 1

      It isn't so much gaining or losing genetic information as a change in genetic information. Basically someone has a sperm/egg cell with mutated DNA (different from what they originally received from their parents)then have a child with the opposite sex via that cell and the offspring now has an altered genome due to that. Or during creation of that "sex cell" genetic information gets exchanged between the (reproducing) person's mother and father DNA to create a new combination of alleles (different versions of genes. Either way the new offspring has a novel set of genetic information that neither of its parents had. This is the most basic step of evolution.

      Natural Selection refers to the fact that once this new child is born it may (or may not, depending on what kind of genetic change occurred) have some trait that neither parent had, and this may help it survive and reproduce better/more often than its peers or worse/less often. In this way more "adaptive" DNA alterations are passed on than nonadaptive. Also keep in mind that what is adaptive for one generation or location may not be for another (skin color is an example of this)

      I think thats a better way to make the distinction.

  24. Umm - What was the alternative Theory? by pugugly · · Score: 1

    Seriously, selection of unsuccessful traits?

    The blurb advertises alternative evolutionary theories, but I've never heard of any theory that didn't presume selection of superior adaptations. The only critique I've ever heard of that is the accusation of circular reasoning, i.e.

    What traits are selected for? Adaptive traits.

    What are Adaptive Traits? Traits that are Selected for.

    Not sure I've ever heard a good reason *why* that's not circular - [G]. Of course, I suppose it's circular reasoning that lost items are always in the last place I look too, but that doesn't make it logical for me to keep looking once I've found one - [G].

    Pug

    P.S. "Lameness Filter Encountered?" for using some ascii arrows for clarification? The Lameness filter is arguable pretty damn lame!

    --
    An Invisible Entity of Vast Power whose existence must be taken on faith alone: Liberal Media
  25. Of course they studied nematodes by CleverDan · · Score: 3, Funny

    They are obviously creations of His Noodly Appendage

  26. In case anyone is interested by EnsilZah · · Score: 1

    I've conducted an experiment today wherein several massive objects (1) were released in mid-air at which point they did indeed plummet to the ground in the general direction of the earth's center of mass thus confirming the theory of gravitation.
    I am in the process of writing a paper right now and expect this advance in our understanding of the physical world to be prominently featured in the next issue of Nature.

    (1) My damned keys

  27. Looks like Jesus finally jumped the shark. by xmuskrat · · Score: 1

    Lasted longer then Fonzie.

    --
    activestudios web design
  28. So... by zer0skill · · Score: 1, Insightful

    So... That confirms there is no god? Or proves that we should teach Darwin in schools? Instead of the God Creation stuff?

    --
    --Matt
  29. So wait a second... by feepness · · Score: 2, Funny

    Evolution is intelligently designed?

    1. Re:So wait a second... by Jugalator · · Score: 1

      Evolution is pretty much nature's way of letting all organisms loose to do whatever they wish with their intelligence and physiology, and see where that brings them. :-)

      So it's a pretty ruthless design. For example, Britney Spears has had children.

      --
      Beware: In C++, your friends can see your privates!
  30. There is no God.... by gandhi_2 · · Score: 0, Troll
    ...NetCraft confirms it.

    It's ONLY a theory!

  31. Who comes first? by ImaLamer · · Score: 4, Funny

    A chicken and egg are lying in bed together. They are both smoking.

    The chicken leans over to the egg and says; "I guess we answered that question."

  32. Creating vs. developing by Ichijo · · Score: 1

    ...matter and all things were created...by an omnipotent Creator, and not...developed.

    What's this difference between creating and developing that I'm not aware of?

    --
    Any sufficiently unpopular but cohesive argument is indistinguishable from trolling.
    1. Re:Creating vs. developing by Adambomb · · Score: 1

      THANK you.

      That is exactly what I was trying to say, but you found the concise phrasery that works =D

      --
      Ice Cream has no bones.
    2. Re:Creating vs. developing by Anonymous Coward · · Score: 0
      What's this difference between creating and developing that I'm not aware of?

      Al Gore was instrumental in developing the internet, he didn't create it.

      :-P

  33. TAG IT by Anonymous Coward · · Score: 0

    nematodes' sexual organs

  34. WTF? by jcr · · Score: 3, Insightful

    Nobody ever said the selection was random, except for some pinhead creationists who didn't know what they were talking about. Mutations are random, and selection is the process by which those individuals with advantageous mutations survive while those with disadvantageous mutations do not.

    -jcr

    --
    The only title of honor that a tyrant can grant is "Enemy of the State."
  35. Just look at it by Anonymous Coward · · Score: 0

    Burn in Hell!!! Someone has to say it.

  36. Missing the point DNA never really evolved ! by FromTheAir · · Score: 1
    The one thing that does not appear to have needed to evolve is DNA. It seems to have started out whole and complete. That is important point that evolutionary theorists seem to miss. So to reiterate, it would seem that DNA has never evolved. Just different switches are flipped by somthing intelligent. Organic flash memory or EEPROM.

    The other thing that is no explained is the seemingly sudden appearance of certain species which is why there are so many missing links.

    Another things is that no one has explained species wide mutation for example turning off of the enzyme that produces vitamin C.

    In Infinite Play the Movie http://www.infiniteplaythemovie.com/ they claim that viruses are a way the one member of a species propagates a change to other members of the species. They also claim that DNA is software programmed by something intelligent. But not some personalized God.

    A lot of people don't know that 40,000 years there were only 1,000 members of our species based on mitochondrial DNA. The standard theory of evolution is destroyed by a very white beetle, correlation The Beetles White album. http://www.treehugger.com/files/2007/01/beetle_biomimic.php The Cyphochilus beetle has a highly unusual brilliant white shell. New research by the University of Exeter and Imerys Minerals Ltd. and published in journal Science (19 January), reveals the secret to this beetle's bizarre appearance. The Cyphochilus beetle has evolved its brilliant whiteness using a unique surface structure. At one 200th of a millimetre thick, its scales are ten times thinner than a human hair. Industrial mineral coatings, such as those used on high quality paper, plastics and in some paints, would need to be twice as thick to be as white. According to ISO accredited measurements for whiteness and brightness, the beetle is much whiter and brighter than milk and the average human tooth, which are both considerably thicker. 'This kind of brilliant whiteness from such a thin sample is rare in nature. As soon as I saw it, every instinct told me that the beetle was something very special,' said Dr Pete Vukusic of the University of Exeter's School of Physics. 'In future, the paper we write on, the colour of our teeth and even the efficiency of the rapidly emerging new generation of white light sources will be significantly improved if technology can take and apply the design ideas we learn from this beetle.' Colour in both nature and technology can be produced by pigmentation or by very regularly arranged layers or structures. Whiteness, however, is created through a random structure, which produces 'scattering' of all colours simultaneously. Using electron microscope imaging, Dr Vukusic studied the beetle's body, head and legs and found them to be covered in long flat scales, which have highly random internal 3D structures. These irregular internal forms are the key to its uniquely effective light scattering. By balancing the size of the structures with the spacing between them, they scatter white light far more efficiently than the fibres in white paper or the enamel on teeth.

    --
    "an infinite player that has lost his finite mind" ~Infinite Play the Movie (it blends with reality)
    1. Re:Missing the point DNA never really evolved ! by bunratty · · Score: 4, Interesting

      You bring up a point that many do not understand. Evolution says nothing about how life or DNA started. It simply explains how once life started with DNA, the process by which it evolves. Similarly the "big bang" theory says nothing about how the universe started. It explains how it expanded and changed from a hot, dense, nearly uniform state to its cold, sparse, unevenly distributed state. There are hypotheses about life starting with an RNA world, or starting with undirected metabolism, but these are completely separate from the theory of evolution, for which we have ample evidence.

      Your other point seems to do with the fact that some evidence is not completely explained by evolution. In science, there is always some observation left unexplained, which is why Einstein's theory of relativity and quantum theory superseded Newton's laws. It does not mean that there must be a supernatural explanation for the observations that are currently unexplained.

      --
      What a fool believes, he sees, no wise man has the power to reason away.
    2. Re:Missing the point DNA never really evolved ! by rush22 · · Score: 1

      Aliens designed DNA. Say it, don't beat around the bush, it makes you sound like an idiot.

  37. Is Anything 'non-deterministic'? by gr84b8 · · Score: 1

    I always thought everything was eventually 'deterministic', and that non-deterministic machines were purely theoretical.

  38. Now, by Anonymous Coward · · Score: 0

    where is the surprise in that?

  39. Not surprising by greg_barton · · Score: 1

    Newtonian mechanics is a deterministic process. Quantum theory is not. And yet, somehow, we get from the non-deterministic phenomena to the deterministic ones.

    So now there's a study showing that the seemingly random elements that go into evolutionary pressures can lead to a reliably predictable result.

    Good to know folks are doing research in this direction. Let's get more of it. :)

    1. Re:Not surprising by kcelery · · Score: 1

      Quoted from V.I.Arnold's On teaching of mathematics:

      The mathematical technique of modelling consists of ignoring this trouble and speaking about your deductive model in such a way as if it coincided with reality. The fact that this path, which is obviously incorrect from the point of view of natural science, often leads to useful results in physics is called "the inconceivable effectiveness of mathematics in natural sciences" (or "the Wigner principle").

      Here we can add a remark by I.M. Gel'fand: there exists yet another phenomenon which is comparable in its inconceivability with the inconceivable effectiveness of mathematics in physics noted by Wigner - this is the equally inconceivable ineffectiveness of mathematics in biology.

  40. unreasonable extrapolation from single experiment by Anonymous Coward · · Score: 0

    first - 'deterministic' in this case means 'the selection' part of evolution (I would call it 'cooling'), 'stochastic' means 'the mutation' part of evolution (or 'heating')

    second, the experimenters take 'a highly conserved, essential organ' and see how it changes with some iterations, and learn that the changes seem to be more affected by 'cooling' than 'heating'

    the report seems to lack info on environment stimuli that were applied to the nematodes

    so in the summary they extrapolate that the evolution depends more on 'cooling' than 'heating', but even they (in the body of the report) recognize that the results can be applied to the vulva of the nematodes only - their results tell nothing about the evolution in general

    the experiment tells us about one special organ in one species group (51 of them - supposedly all coming from some common ancestor) in a rather short time and with unknown environment (very likely the environment was quite similar for all the nematodes) - the extrapolation to all organs in all species in all environments is unfounded

  41. useless article...? by quest(answer)ion · · Score: 1
    i dunno about anyone else, but it seemed to me that the actual paper TFA refers to is a bit...unimpressive. now, IANA Molecular Genetecist, but i've read a fair amount about macro-evolutionary theories, particularly about speciation, and it seems that if you want to talk about the processes involved in evolution, you talk largely about distinctive, novel features, and you talk about adaptations. seems like the paper talks about...neither? that puts it in an odd space to discuss non-deterministic methods of genetic drift.

    now, putting aside any jokes about worm vulvas, the original paper says this about the features they chose to focus on:

    As a model, we used the nematode vulva, a highly conserved, essential organ maybe i'm just not deep enough into the specifics of the exact features they were looking for, but common sense indicates to me that if you pick an "essential" feature to study, you are going to be looking at a feature where selective pressures--whether they favor novelty or conservatism--are going to be extremely strong. wouldn't that predict the results they report, that the selected-for variations, being under heavy selective pressure, show a non-random bias?

    i'm inclined to agree with anyone who says this isn't news, and for two reasons:
    1) if i'm right (probably not) in thinking this study's choice of subject predicted its results, that's just bad science
    and 2) if i'm wrong, and this is just telling us that actual changes in an organism are primarily governed by selective pressures rather than the god Chaos, this adds NOTHING to the current popular understanding of evolution except another opaque and misleading news story.

    personally, i'd like to see much more popular science writing on the mechanisms governing variation rather than the mechanisms of selection that pare that variation down into new features--each is one side of the natural selection coin, but it seems like selection gets all the attention.
    --
    /. is what happens when geeks talk. get used to it.
  42. duh? by samantha · · Score: 1

    Since when was there any shred of doubt on this point?

  43. Intelligent Design V Disorganized Organization. by davro · · Score: 0


    Intelligent design: Complexity implies a designer, The universe is highly complex, Therefore the universe has a Designer, Therefore a God exists.

    Evolution: Complexity implies uncertainty, The universe is highly complex, Therefore the universe is Disorganized and Organized, Therefore disorganized complexity allows for genetics to drift and organized complexity allows for natural selection to occur.


    Intelligent design died in the process of natural selection.

  44. Inquiring minds wish to know... by megaditto · · Score: 0, Offtopic

    Given that the worm penises kept evolving one way... Is Bigger still Better?

    --
    Obama likes poor people so much, he wants to make more of them.
  45. nice fallacy... by Anonymous Coward · · Score: 0

    As soon as it jumps species let me know, until then this proves nothing about Darwin's THEORY of MACRO (species level) evolution...

  46. Keyword "deterministic" by oldhack · · Score: 1

    How did the Monkey (or the study's authors) determine (ehem) the selection/mutation was deterministic? Being deterministic is distinct from selection favored for survival/reproduction. Btw, what theory proposes random evolution? No, I didn't RFTA (get OUT!!). I didn't even RTF comments - mod me dupe for all I care.

    --
    Fuck systemd. Fuck Redhat. Fuck Soylent, too. Wait, scratch the last one.
  47. Still amazing everything came from hot hydrogen by Jeff1946 · · Score: 1

    Skipping over the why of the big bang, at one point the universe was nothing but very hot hydrogen. Somehow from this we evolved. Yet we did. The one lost chapter in this story how did the first DNA come into existence? Truly one of the great mysteries of science. Still we have come a long way from one hundred years ago when we speculated on where does the sun's energy come from?

    1. Re:Still amazing everything came from hot hydrogen by bill_mcgonigle · · Score: 1

      The one lost chapter in this story how did the first DNA come into existence?

      If I recall high school biology, Miller showed that we can get purine and pyrimidine bases with primordial ooze and a spark.

      Mix those around and you're bound to get plenty of DNA and RNA. The trick, I think, is assembling a system of self-contained replication (even as simple as a virus' protein sheath), but given a big planet and a billion years it's not shocking to think that some small sheltered pool somewhere got the right mix together at the right time, especially in the RNA/RNA world. Then throw in a Recees Peanut Butter Cup moment and swap in some thyamine for the uracil, and, whammo.

      A billion years doesn't take much to say but it sure feels like forever. It seems that's how long it took to bootstrap the problem on this planet. Others might have gotten on faster or not at all, even in one of the previous stellar generations.

      --
      My God, it's Full of Source!
      OUTSIDE_IP=$(dig +short my.ip @outsideip.net)
  48. What is this proof of which you speak? by CurtMonash · · Score: 1

    GA experiments -- whatever they are -- showing reasoning ability is not an adaptive trait?

    I VERY much doubt that's accurate.

    --
    To err is human. To forgive is good system design.
    1. Re:What is this proof of which you speak? by Metasquares · · Score: 1

      My guess is that GA in this context means "genetic algorithms". However, I can't see how such an experiment would be conducted using GAs, considering that they're merely a sort of optimization/machine learning algorithm (and machine learning is one of my research interests). No one expects GAs to exhibit human-level reasoning.

      Therefore, I think the GP should cite these experiments so we can judge for ourselves.

    2. Re:What is this proof of which you speak? by Anonymous Coward · · Score: 0

      Since you are interested in GA/Machine learning, consider this: apparently, there is no other known mechanism of steering own evolution toward better adaptation but choosing the mating partner that seems as successfully adapted as possible. Translated to unloaded, technical speak, it means: allow a little bit of "peeking" or "plagiarism" to each competing "design" in GA, so that they incorporate traits from others, proved beneficial in previous iteration of optimization process.

      Allowing gene carriers to assess other compatible gene carriers and choose the winners ("most desirable mate"), then copy and combine parts of their genome with own one (if they are so lucky, of course, but that's why so many species have polygamy - it spreads "winner genes" fastest) is very powerful multiplier of evolution speed.

      Of course, it may also backfire, by running into ridiculous decision loops wasting resources (developing hypertrophied "secondary sexual characteristics"), as it often does in biological designs, but when there is immediate and great need to solve grave cases of mis-adaptation to environment threatening the survival, priorities kick in (throughout humanity, it is still primary best trait to be rich, more then ... well-hung, if I correctly understood the meaning of that term in spam emails).

    3. Re:What is this proof of which you speak? by Metasquares · · Score: 1

      In biological evolution, the difference between natural and sexual selection is a bit more clear-cut than it is in optimization. Things that are naturally fit survive; things that are sexually fit are selected first for reproduction based on the perceived ability of their offspring to survive. Like you said, barring weird things like Fisherian runaway, allowing sexual selection based on perceived fitness is a good selection strategy for improving fitness not only of each individual, but of the population as a whole.

      However, how would you advertise the correctness of an optimization solution? Perhaps by the degree of convergence (MSE?), but this is part of any good fitness function already anyway. You don't need to advertise that you weren't eaten by a leopard; the fact that you're still here makes it redundant. Maybe selecting traits that are disadvantageous but survive anyway? (Handicap principle). Looking at the functional form is promising if you can recognize one that looks like it would converge well. Of course, we'd like to avoid getting stuck in local minima as well, and Fisherian runaway would probably take the form here of some sort of functional overfitting which we'd also like to avoid if possible (we can probably get rid of it, as in biological evolution, using the standard fitness function). One possibility is to first naturally select (standard GA) a solution, then to compare forms to the ones that most closely converge (in essence, to look for "healthy" solutions). Another might be to evolve the criteria with the GAs, which might give a better result.

      Anyway, this is getting tangential. You shouldn't have gotten me started :)

  49. Re:Please explain the platypus. by tempest69 · · Score: 1
    The platypus is a nice creature that could be researched just fine on wiki.

    The Platypus is a mammal, it lays eggs like it's reptilian ancestors did. The platypus evolved a great deal on its own, however its adaptations are it's own, its poison is different than snakes or insects. The bill is much different than a ducks. And while it is a mammal. it doesn't have teats, the milk comes out something like sweat would. It is very similar to the echidna, which also lays eggs.

    Storm

  50. Wow by sigzero · · Score: 1

    Yet another theory on how it all happened.

  51. Answer in here by bill_mcgonigle · · Score: 1

    for instance they observe fewer "reversals" (reappearance of traits that were previously common) than would be expected if the variability were entirely stochastic/random.

    Ah, thank you. That at least helps me understand what they're saying. I assume they haven't yet proposed mechanisms.

    Gappers will delight, no doubt, until they do.

    --
    My God, it's Full of Source!
    OUTSIDE_IP=$(dig +short my.ip @outsideip.net)
  52. Incorrect about sickle cells by hung_himself · · Score: 1

    Google and wiki it. You are mistaken. Sickle cell anemia occurs when there are 2 bad alleles.

    You are thinking of the reason that this situation is maintained (at least as given in textbooks - whether this is really the case is harder to prove) - heterozygotes with only one sickle cell allele may have an advantage in resisting malaria.

    1. Re:Incorrect about sickle cells by omris · · Score: 1

      yes. this used to be one of the first arguments dragged up against evolution: if natural selection is supposed to be breeding out naughty genes that make you unhealthy, why are there so many genetic diseases in the population.

      as it turns out, many genetic diseases confer some benefit (or did, at some point in time) in the haploid, or "carrier" form.

    2. Re:Incorrect about sickle cells by Eternauta3k · · Score: 1

      Whoops. Replace sickle cell disease for some other disease with incomplete dominance and deadly recessive homozygotes :)

      --
      Yeah. Would you choose a neurosurgeon who pokes around people's brains in his spare time? I wouldn't.
  53. What the article is REALLY about by hung_himself · · Score: 3, Informative

    Wow, this is a triple convergence of a bad and confusing title, summary and article (which is a summary of the actual journal article) which is unusual even for slashdot.

    This really isn't about Darwinian evolution which involves random mutations and selection of the favorable ones. However, there are some characteristics which are neither advantageous or disadvantageous. There is a debate about how many characteristics are "neutral". For example, did large noses appear because they are advantageous (for warming air perhaps) or because they just worked out that way by chance. So the original paper asked this question about worm vulvas and found that nearly all the characteristics that they looked at did NOT arrive by chance but were selected for (i.e. were advantageous in some way).

    It is important to note both possible results would be consistent with Darwinian evolution. The only questions being addressed are the mechanism (does evolution go through mostly neutral phenotypes before a favorable phenotype is selected) and the extent that characteristics are neutral. For worm vulvas, it appears that the vulvas that form are biased towards the most favorable ones.

  54. Wrong question to ask ... by tomhudson · · Score: 1

    " with the main mechanism for the development favoring a natural selection of successful traits,"

    Like anyone would expect the development favoring a netural selection of unsuccessful traits?

    Any mechanism that favoured the selection of unsuccessful traits would be selected out of the population pretty quickly, but people who insist on believing in ID or the creation myth don't see that, just like they don't see the opposite must be true - successful traits HAVE to be selected.

    1. Re:Wrong question to ask ... by susano_otter · · Score: 1

      successful traits HAVE to be selected

      Ah, but is that really true? I mean, we all assume that unsuccessful traits are eliminated because the organisms that bear unsuccessful traits are unsuccessful at reproducing. But what this article seems to suggest is that in organsims with a combination of advantageous and disadvantageous traits, they are more likely to pass on their advantageous traits to their offspring.

      So, why do they preferentially pass on the advantageous traits, instead of passing on both advantageous and disadvantageous traits without bias either way, until natural selection weeds out the predominantly disadvantageous organisms by preventing them from passing on any traits at all? And--as I asked originally--where did this advantageous trait of preferentially passing on advantageous traits arise?
      --

      Any sufficiently well-organized community is indistinguishable from Government.

    2. Re:Wrong question to ask ... by tomhudson · · Score: 1

      "where did this advantageous trait of preferentially passing on advantageous traits arises"

      You misunderstand the nature of natural selection.

      Individual organisms don't have a "preference" for passing on advantageous traits over disadvantageous traits - they can only pass on those traits they have. If those traits are disadvantageous to the next generation, the next generation is less competitive.

      Traits that are neutral may or may not be passed on. Traits that are disadvantageous mean that the host organism is less able to compete. When there are limits on resources (and there are ALWAYS limits), the less competitive are the ones that starve.

      Again, the individual organisms don't "decide" what traits to pass on - the egg and sperm pass on what they have. The only decision is in the mating process, and we all know how much of a random crap-shoot that is.

      Its because it IS random that advantageous combinations of genes can come about. Their hosts offspring will be better able to compete, but there is no "preference" by the organism to pass on good genes as opposed to bad genes - it only passes on the genes it has.

    3. Re:Wrong question to ask ... by susano_otter · · Score: 1

      You misunderstand the nature of natural selection.

      You misunderstand the nature of the article.

      Individual organisms don't have a "preference" for passing on advantageous traits over disadvantageous traits

      Except that according to the arcticle, individual organisms do have a "preference" for passing on advantageous traits over disadvantageous traits.

      If those traits are disadvantageous to the next generation, the next generation is less competitive.

      And according to the article, if those traits are disadvantageous to the next generation, they are less likely to be passed on to the next generation.

      Again, the individual organisms don't "decide" what traits to pass on - the egg and sperm pass on what they have.

      Except that according to the article they do "decide" what traits to pass on - they are more likely to pass on advantageous traits.

      The only decision is in the mating process, and we all know how much of a random crap-shoot that is

      Except that according to the article, it isn't such a random crap-shoot as we thought - Advantageous traits are more likely to be passed on.

      there is no "preference" by the organism to pass on good genes as opposed to bad genes - it only passes on the genes it has

      Except that according to the article, there is such a preference by the organism to pass on good genes as opposed to bad genes.
      --

      Any sufficiently well-organized community is indistinguishable from Government.

    4. Re:Wrong question to ask ... by tomhudson · · Score: 1

      "Except that according to the arcticle, individual organisms do have a "preference" for passing on advantageous traits over disadvantageous traits."

      Not quite. Starting with a population where there is a random distribution of traits, you would expect that eventually, those that are more successful would tend to "breed true", for the simple reason that those that didn't would tend to be less successful at passing on their traits overall. Also, since they no longer have the entire distribution of traits in their sub-select of the gene pool, they would tend to breed in a more limited fashion. Its why breeding a newfie with another newfie gives you newfie puppies, and not something else. Genes can only pass on their own contents.

      To say that something is deterministic just means that we can predict the outcome, same as we can predict that breeding 2 newfies won't give rise to a chihuaua, and certainly not a chicken.

      Look at humans. If both have only the recessive genes for blue eyes, the kids will have blue eyes. If you had an island where everyone had only the recessive genes, you're not going to expect a random distribution of eye color. The eye color for the population is therefore deterministic. There is NO randomness, outside of mutation.

      Perhaps we can take an example from the current economic crisis. We could say that homeowners who bought during the housing bubble have a "definite preference" for foreclosure. It doesn't mean they want to be foreclosed on, just that its pretty much inevitable for between 2 and 6 million families over the next 2 years. They can't "dip into" home equity that isn't there to refinance, just as animals can't pass on genes they don't have.

      The unfortunate use of "preference" in the article had nothing to do with any sort of decision-making - it just described the mechanism of what happens as genes are culled from the pool. Increased complexity requires this culling. An example of that is the cat's brain. 2/3 of the brain cells are destroyed as the cat matures. This way, what is left is able to function as an adult cat, rather than being a mish-mash of unordered random cells, the same way that a book makes more sense than a billion randomly thrown together letters. Sometimes, less really is more.

      "evolution is not a random process, but rather occurs through the natural selection of successful traits". Like I said, how would you expect succeeding generations to compete if they inherit unsuccessful traits? The natural tendancy is for those parts of the populations that have more successful traits to outbreed the rest, with their genes becoming the largest portion of the gene pool, until the least successful just disappear because their hosts don't live long enough to breed, since they can no longer compete.

    5. Re:Wrong question to ask ... by susano_otter · · Score: 1

      The article claims that flatworms with a combination of advantageous and disadvantageous traits are more likely to pass on the advantageous traits. The article says that this claim is backed up by experimental evidence.

      --

      Any sufficiently well-organized community is indistinguishable from Government.

    6. Re:Wrong question to ask ... by tomhudson · · Score: 1

      Lets try again.

      Advantageous genes will tend to become dominant. Disadvantageous genes will either be removed from the gene pool, or be recessive, so that it would take one from each parent for the disadvantageous gene to express itself.

      That mechanism alone is sufficient to explain why advantageous genes are "preferentially" passed on.

      Pass along too many disadvantageous genes, and your descendants can't compete, and are removed from the gene pool - so after enough generations, we would only see those populations that had passed along mostly advantageous genes.

      The initial population had some groups with many more disadvantageous genes. They're gone. The "feed stock" or gene pool that is left, is better. Previously, there were also portions of the population that "preferentially" passed on the crap genes - random combinations of genes would do this, as well as explain why they disappear over generations, leaving only the "preferrance to good genes."

      When the environment changes, some of those recessive genes, as well as some random mutations, will be more beneficial than the current "preferred genes". They will, over generations, become the new "preferred genes", as those who don't have them can't compete as well for the same resources.

      We have to be careful about anthropomorphizing what we're looking at. "Preference" isn't the same as what we generally use the term.

      Also, some genetics is counter-intuitive. A good example is stupidity, which is actually a survival trait (which is the real explanation why stupidity isn't bred out of humans - it has value in enabling the bearers of the "stupid" genes to laive long enough to pass on their genes). People who are less curious aren't going to explore as much, try new things, etc., so they end up taking fewer risks, or the risks they take are the same ones everyone else who is similarly stupid|dull|whatever takes, and mostly survivies. They won't be flying a kite during a thunderstorm to see what lightning is made of. They won't think to eat that funny-looking animal, until they see someone else do it. So human breeding has a preference for stupidity and unoriginality. Its a survival trait for the species (if you're skeptical, just look at how people pair up/choose their mates, or look at how almost everyone insists on following fashion trends - being "original" by copying the latest :-)

      This doesn't mean that stupidity is an unalloyed good thing. It just means that, if it doesn't interfere with people getting to the point of passing their genes onto the next generation, it won't be selected out of the population. Look at how stupidity abounds - how people *know* they're being stupid, and can't stop. They smoke. They over-eat. They use Windows, then curse their computer, then buy another one with Windows (the defintion of stupidity - doing the same thing over and over and expecting different results :-). The *sort of* elect Bush - twice! They drive too fast, they drive too slow, they drive when it would take less time to walk than it does to get in the car, drive to the corner store, and maneuver into the cramped parking lot - then they curse how hard it is to park ... again.

      They get caught up in "bubble mentality" - the internet stock bubble, the current housing fraud bubble. Everyone else is doing it, so they should too, because imitating others is *safe*. Until it isn't. When the environment changes (physical or financial), that *safe* behaviour becomes toxic, and the minority who didn't mimic become much more competitive, much more able to survive (funny how financial systems imitate biological ones).

      Anyway, I've got some code to write - gotta help rid the world of lawyers.

  55. Natural selection is less "creative" now by davide+marney · · Score: 1

    My take on the research was that natural selection was shown to have less "creative power" than has been thought; natural selection is more constrained, and less variable. This makes the case for random mutation as the engine of change harder to maintain. The chance that a potentially beneficial, but rare, mutation will make its way into the population is now lower.

    Personally, I remain unconvinced that a random generator (mutation) hooked up to a filter (natural selection) can create an entirely new system, regardless of how many generations are allowed. Whenever the random generator creates a bunch of outlier conditions, they will just get filtered out of consideration, so it is unlikely that truly new forms will arise in this manner.

    I think the evidence points towards some kind of self-organizing principles being at work in the creation of new systems. I am speaking of entirely natural causes here, nothing supernatural. The evidence seems to be that life is "designed to design", and is far more complicated than can be explained by the mechanisms of random mutation and natural selection alone.

    --
    "We receive as friendly that which agrees with, we resist with dislike that which opposes us" - Faraday
  56. And in other news, by kramer2718 · · Score: 1

    Car accidents found to be serious health risks.

    C'mon, people. *Yawn* There have been dozens of studies showing this in fruit flies nematodes, and other simple organisms. Move along.

  57. This just in! by Anonymous Coward · · Score: 0

    This just in! New study proves God exists, and therefore, by his own logic, he does not.

  58. The point by Joseph_Daniel_Zukige · · Score: 1

    It's not the question of whether the illusion is real.

    It's how much of the illusion of reality which you experience is based on axioms, which, if shifted, alter the meaning of the proof.

    The doorknob turns, the door opens. Therefore, I am God.

    The fist connects. I go down. Therefore, the other guy is God.

    A much more sensible conclusion in both cases is "god", but our hubris, fear, and lack of patience push the capitalization.

    ("God" == that entity which is currently in charge, "god" is an entity which can be in charge of some small domain.)

    1. Re:The point by repapetilto · · Score: 1

      why use a loaded word like god, you could just as well divide the universe into subjects (who can manipulate objects and other subjects, along with being manipulated themselves) and objects (that can only be manipulated)

  59. responding to your sig by Joseph_Daniel_Zukige · · Score: 1

    "Worship Me or I will torture you forever. Have a nice day." God.

    "Follow the laws of physics or they will torture you forever." Your physics professor.

  60. Giraffe!! by mqduck · · Score: 1

    An opposing theory says evolution takes place through randomly inherited and not necessarily advantageous changes. Using the giraffe example, there would not be a common neck-lengthening trend; some would develop long necks, while others would develop short ones. I don't know about the rest of you, but I feel like this article doesn't give the slightest bit of explanation of the reasoning behind the theory that was apparently just disproven. Therefore, the whole thing is meaningless to me.

    Long story short: Meh?
    --
    Property is theft.
    1. Re:Giraffe!! by tinkerton · · Score: 1

      Agreed. I think the competing theory in question is the neutral theory of molecular evolution of Motoo Kimura. It's surprising to read that proving one would disprove the other though. That's not how I recall it. I thought Kimura's idea was that not all evolution was driven by some kind of fitness gradient.

  61. sniggering in the sky by Joseph_Daniel_Zukige · · Score: 1

    I think this sums up the average atheist's argument against God:

    There's certainly some appeal to the idea of a deity sniggering in the sky, laughing at how stupid we are, but whatever its aesthetic appeal, I don't find it very convincing.

    The universe was not the way I thought it ought to have been, so God must be sniggering at me, therefore I must either be angry with God or I must not believe in God.

    No chance that maybe I just should, for instance, have studied harder for the test. Can't be a geek and be unsure of myself.

    1. Re:sniggering in the sky by cretog8 · · Score: 1

      Well, I am an atheist, yes. And so I don't believe that there are any gods sniggering at me. (I'm sure lots of humans do.)

      I'm not sure if you misunderstood me, though. The "sniggering deity" I was referring to was one who (hypothetically) created humans in such a way as to make it look like they didn't create humans--deliberately being tricky. That's what it looks like to me when people try to reconcile evolution by natural selection with creation (in the sense of creating specific outcomes/organisms).

      There's plenty of people who don't believe in natural selection at all. They see it as quite clear that their deity created people in some other way and did so blatantly, and so I don't imagine their deity as a sniggering one. I think they're wrong, but that's something else.

  62. You assume a lot. by Joseph_Daniel_Zukige · · Score: 1

    Maybe Einstein was simply comfortable with a God who is not interested in controlling what we do.

    A guy named Joseph Smith was also comfortable with a God who is not continually keeping humans from doing stupid things or otherwise controlling what we do, but he claimed to have met God.

    I don't think Einstein was being clever about hiding his beliefs. I think he was just refusing to side with people that claimed they knew everything about the entity that created the universe, whether on the "religious" side of their debate or on the "atheist" side. Admitted, I'm making assumptions in saying so, but my assumptions seem to put less burden on his words.

    I'm not going to claim Einstein believed the way I believe (and I haven't really described the way I believe). I just think his answer was "None of the above." when asked to take sides in a debate he didn't consider meaningful.

  63. Evolution is the exact opposite of randomness by OneSmartFellow · · Score: 1

    Evolution tries to control the effect of random gene mutation through natural selection. Basically evolution sees randomness as a bad thing unless it produces a being (plant, animal insect, whatever) which solves an existing problem better.
    Thinking anything else is just wrong.

  64. Next Big Bang? by Msdose · · Score: 1

    If the evolution of the universe has a purpose, it must be to produce the next universe. Maybe it produces a species that can start a big bang by accident while experimenting with a Suprconducting Supercollider. I wonder if there is a safe place in the universe to watch from when that sucker goes off. Bethlehem, maybe?

  65. Proof by tgibbs · · Score: 1

    The word "proof" has more than one meaning. In mathematics and logic, it is used to refer to derivation from postulates--although because for most mathematical/logical systems it is not generally possible to prove that the system itself is without contradiction, even that is somewhat less than absolute.

    In science, "proof" is used more to mean "test," as in the sense of "proving ground." So a theory is continuously being proved, but it is never shown to be absolutely true.

  66. Random Notes by jman.org · · Score: 2, Informative

    Am not a biologist by trade, but had always thought evolution was at its root a random process. It has the potential to try anything, but known survival traits will always be favored.

    We do understand the mechanism by which a trait will become dominant; reproduction of that built-in behavior to offspring. What we don't understand is how such dominance prevents other, competing traits from becoming active.

    In the Science Daily excerpt, they mentioned long-necked giraffes, and how if evolution was random we would also see those of the short-necked variety.

    This logic does not follow. We would see short-necked giraffes only if their survival let them reproduce. As they would tend not to - being unable to reach the leaves at the top of the tall trees, thus denying them the energy required to either attract a mate or carry offspring to term - this hitherto unknown mechanism would not favor that trait becoming dominant, though like the activities of a good pack rat, the DNA which would allow this trait to exist may continue to be stored, and passed - unused - on to future generations.

    Thus, evolution hedges its bets. It may come to pass someday that the short-necked giraffe was more easily able to survive than their long-necked counterparts. Perhaps all trees become shorter. Perhaps some form of brittle bone disease kills the ones with longer necks, and they change their neck length and diet in order to survive. Perhaps they enter into a symbiotic relationship with some other creature that digs up food and leaves it on the ground. Who knows what the future will bring. But should conditions change, the potential for such a trait, still dormant within the species, may emerge to dominance.

    This is not meant to introduce any talk of "design" into evolution, but the fact is our understanding of the system remains in the realm of how traits are passed on, not why.

  67. This is not what you all think by Gastrolith · · Score: 4, Insightful

    The title of the post is misleading. This is not intended to be a confirmation of the modern evolutionary theory. This paper is about HOW actually evolution of certain aspects of the nematodes happen, not about whether evolution happens or not at all. The modern theory of evolution considers three different mechanisms in which evolution occur: * Natural selection (the only one described by Darwin), which consists in the differential reproduction of organisms (let's just say organisms, to keep it simple) determined by inheritable traits (adaptive traits. * Genetic drift, which consists in the "random" change in the frequency of a gene in a population. * Genetic flow, which consists in the transference of genes among populations. From the summary of the paper: "We propose that developmental evolution is primarily governed by selection and/or selection-independent constraints, not stochastic processes such as drift in unconstrained phenotypic space." Put simply, this paper says that natural selection is the prevailing mechanism in developmental evolution. Sorry about my bad English. Not a native speaker.

    1. Re:This is not what you all think by Gastrolith · · Score: 1

      Sorry about the bad formatting... next time will use the "Preview" button.

  68. Convergent Evolution by eMartin · · Score: 1

    There are many things that have evolved multiple times without a common origin.

    Please read:

    http://www.daviddarling.info/encyclopedia/O/octopus_eye.html

    http://en.wikipedia.org/wiki/Convergent_evolution

    1. Re:Convergent Evolution by tempest69 · · Score: 1
      That is the point. It evolves, and isn't a cut and paste job. So each item may be superficially similar, but has taken its own path.. bats can fly, but that doesn't mean that they have a bird design. However I would expect that more similarities would occur due to similar niche and mobility.

      Storm

  69. Got wants you to be a winner by smchris · · Score: 1

    I can't wait until some tele-evangeli$t worms nematodes' sexual organs into his sermon about how Jesus will help you get rich in real estate.

  70. it takes two to evolve by wikinerd · · Score: 1

    It takes two to evolve: environment and species. When the environment changes, the species adapt in a generally uniform way thanks to selection. No surprises, it's simple logic: if I remove all the water from the oceans, we will witness a massive migration of species from water to land, while species unable to develop legs, lungs, etc will die. You don't need to wait to see whether it will happen, because knowing all parameters to the problem you can guess with good probability the end result.

    Those unable to understand evolution should write down a genetic algorithm and watch it run. If you change the fitness function or some other parameter, genes not fitting it will be removed from the population. It may take some time, but eventually it will happen. Sometimes I think that schools teaching evolution should do so by making kids understand how an evolution computer simulation works and then letting them change a few parameters and experiment while they learn (oh, and if recent papers suggesting the universe is simulated are true then we may very well be inside such a school simulation).

  71. random mutation? by Paul+Dubuc · · Score: 1

    Natural selection may not be random, but aren't the the genetic mutations which affect evolution random?

  72. Nematode genitalia? by M311554M · · Score: 1

    Isn't this just another reason for researchers to examine nematode genitalia? Someone needs a date...

    1. Re:Nematode genitalia? by susano_otter · · Score: 1

      Using a highly-rated post near the top of the thread to add your offtopic bullshit might be less annoying if you had actually managed to come up with something original and non-obvious. You're about two days late, jackass.

      --

      Any sufficiently well-organized community is indistinguishable from Government.

    2. Re:Nematode genitalia? by M311554M · · Score: 1

      Ouch - are you the posting police? How do I get that job?

  73. Context by toddhisattva · · Score: 0, Flamebait

    In my experience, liberals have always worked hard to counter facts. It would seem strange to consider facts having a liberal bias. They do it by dropping context.

    That way, the isolated fact is self-contained, self-consistent, and therefore true.

    Take, for example, the "fact" that the United States should not have removed Saddam Hussein from power.

    The context of that act was that Saddam had fired over a thousand missiles at our aircraft. The context of that act was that the U.N. sanctions were corrupted by Saddam. The context of that act was that the U.N. sanctions were going to end. The context of that act was that after sanctions ended, Saddam would resume his encysted WMD programs.

    And most importantly, the idiots drop the larger context, that in a post-9/11 world, we cannot wait for threats to become imminent. But whenever, and I mean whenever, the administration made that point, the context-droppers would say, "but Iraq had nothing to do with 9/11," and claim that the administration was attempting to "link" Iraq to 9/11. The administration was explaining the necessary change in its worldview, the change necessitated by 9/11, which means that the words "Iraq" and "9/11" appear in sentences together.

    Context is so anathema to liberals (using the American sense of "liberal" which is the exact opposite of the dictionary and European conceptions of the word) their entire thought process consists of isolated factettes. "Halliburton." No verb required, just a single word. Sometimes they make little rhymes so they can march in large corporates and destroy MacDonald's restaurants, these might have verbs to make the meter marchable.

    These context-free lunatics would even jail those who attempt to provide context. Look what they did when someone attempted to provide the context for the CIA sending an ex-ambassador on an intel mission - they went apeshit.

    And really, when someone habitually drops context, they are just apes.

    "give orange orange me give eat orange me eat orange give me eat orange give me me give give me you" says Nim Chimpsky.

    "Halliburton Cheney Bush lied Neocon Halliburton lied Oil died" say the liberals.

    Liberals do not think. Therefore they are not human.
    1. Re:Context by toddestan · · Score: 1

      Take, for example, the "fact" that the United States should not have removed Saddam Hussein from power.

      Here's some context for you:

      1. Saddam was not a threat to the US, was not even an imminent threat and did not have the claimed WMD.
      2. The costs of doing so both in dollars and lives
      3. The loss in standing in the international community from "going it alone"
      4. That it would generate even more hatred towards the US is the middle east, which if anything helps the terrorists
      5. That it throw Iraq into choas, which helps the terrorists
      6. That it would divert military resources away from real threats
      7. That the US had no real plan for the post-Saddam Iraq
      etc.

      It's not like I haven't heard these arguments for the past several years already, and many of them date back before the invasion.

      Liberals do not think. Therefore they are not human.

      And you appear to be yet another idiot Republican that plugs their ears and covers their eyes whenever they see or hear something that doesn't agree with their ass-backwards viewpoints. No wonder you've never heard any "context". Either that, or you're a troll, or both I suppose.

  74. Summon Bevets? by AP31R0N · · Score: 1

    Does /. have a Bevets like Fark does?

    --
    Utilizing the synergization of benchmark e-solutions to pre-workaround action items!
  75. Re:Couldn't one interpret "deterministic evolution by Nullav · · Score: 1

    Or rather 'stupid design', as the above post points out. If an elephant is born without legs, it's getting eaten; if an elephant is born without wrinkly skin and large ears, it's likely going to die from the heat.
    Speaking of elephants, just look at all the number born without tusks now. This would have been more or less neutral if people hadn't started killing them specifically for ivory or had just tranqed the elephants and removed the tusks that way. Instead, tusks became a negative trait and those without tusks increased.
    While one could make a case for this being 'artificial' selection because it was done by humans, and thus an 'intelligent' process, humans weren't doing it to breed tuskless elephants; humans were targeting elephants with tusks because they wanted the tusks, making it a more or less 'blind' process.

    --
    I just read Slashdot for the articles.
  76. Remarkable!! by eyenot · · Score: 1

    These scientists are expressing the gene that leads to splitting hairs, and what's astounding, most of them are probably bald!!

    --
    "Stratigraphically the origin of agriculture and thermonuclear destruction will appear essentially simultaneous" -- Lee
  77. Lamarkian? by mj24 · · Score: 1
    FTA: "Since random development would not create such unifying trends, we concluded that the observed development was deterministic, not random," said Professor Benjamin Podbilewicz from the Technion Faculty of Biology."


    Perhaps I'm missing something, but a unifying trend, while affirming against randomness does not necessary affirm determinism any more than the fact that I prefer and tend to choose apple pie over others. IOW, it would seem to allow the possibility of directed evolution a la Lamark....?

    --
    ...He comes from the future.
  78. IF YOU ARE CONFUSED, READ THIS by hdon · · Score: 1

    Slashdot, ScuttleMonkey, and Science Daily all really dropped the ball.

    The research has not "demonstrated that evolution is a deterministic process, rather than a random selection as some competing theories suggested." What the research has demonstrated is that evolution not only selects DNA for mutations which express themselves as functional advantages within an individual organism, but also for mutations which influence the likelihood of other specific mutations.

    All ball-droppers, be very asahmed of yourselves for not being more sensitive to such a controversial subject.

    You should all thank Kebes for his post.

  79. There is no paradox by duyn · · Score: 1

    Evolution is not just the proliferation of random mutations. Mutations which don't in any way affect an organism's reproductive ability aren't the concern of evolution. Natural selection will tend to make mutations which do enhance an organism's ability to reproduce more prevalent through the simple fact that those organisms will be able to reproduce more. The population dynamics associated with natural selection don't prevent evolution, they facilitate it. All the adaptations observed through evolution are ultimately ways of ensuring more effective reproduction.

    Also, the significance of this study appears to be that it provides data to suggest that evolution is driven mostly by the recombination of beneficial genes, rather than random, novel mutations. It seems (from the article) to have little to do with the randomness of mating encounters.

  80. one of those axioms? by Joseph_Daniel_Zukige · · Score: 1

    The universe doesn't cleanly divide into your objects and subjects. It's not as misdirecting as the concept that God, in order to be perfect, must be entirely passive (a concept not limited to ancient Greek philosophy), but from my point of view, it looks like a false partition.

    However, it's actually one of the axioms that often seems to be hidden in arguments about what Jesus meant when he quoted one of David's Psalms, "... ye are gods." The fear that ordinary men might figure out that the do, in fact, have some of the attributes of gods, leads to strenuous logical acrobatics.

    Why use terms that have been burdened with all sorts of stray semantics? If we are too strict with that, of course, we would be unable to use any words at all. But it really isn't necessary to appeal to the absurd.

    Just want to give a few fellow geeks an opportunity to consider that you wouldn't really have to argue against God to reject false concepts about the collection of principles (entity, being, influence, whatever) by which the universe was made, and be which it is still governed.

    (Could I say that you don't really have to argue with the devil when he claims to be God? Just leave the devil to argue with himself and go on about your business.)

    1. Re:one of those axioms? by repapetilto · · Score: 1

      The universe doesn't cleanly divide into your objects and subjects. It's not as misdirecting as the concept that God, in order to be perfect, must be entirely passive (a concept not limited to ancient Greek philosophy), but from my point of view, it looks like a false partition.
      Well yea language isn't perfect but you seem to agreeing that the subjects/objects approach is a more accurate way to describe the situation that simply saying every living thing is god in some domain or the other. The problem I saw with that was its really easy to end up saying "there must be a god for everything" and if what-that-is isn't immediately obvious you have to look to the supernatural rather than taking a more agnostic approach of "I guess we just don't know why that happened/happens yet, or won't ever know."

      Just want to give a few fellow geeks an opportunity to consider that you wouldn't really have to argue against God to reject false concepts about the collection of principles (entity, being, influence, whatever) by which the universe was made, and be which it is still governed.
      Well, here I would have to say that the only way for humans to discover anything approach truth regarding the universe is to rely on what we see,feel,etc. IE the same strategy that works so well for us in everyday life. Even something like mathematics is an extension of this because its all consistent with concepts like if a=b then b=a that are obviously useful and reflections of reality. Allowing something nebulous like "God" (whatever that means to anyone its always going to be something less concrete than most of the concepts invoked in living day to day)into your schema opens a few doors that lead very easily to, as you say, "false concepts." So thats why I think it's a flawed philosophy in this day and age of using more practical approaches to figure shit out. I mean look around you to see evidence of that consistently accumulating knowledge. (If I'd have lived a thousand years ago I would probably think differently, but only because less had been explained via other means)
    2. Re:one of those axioms? by repapetilto · · Score: 1

      Also just to be clear, I don't think the god concept should be disregarded, just tucked away into the back of the mind and only invoked along the lines of "Well shit, maybe its just beyond human comprehension and there really is some ultimate maker that planned it that way." It's also a useful concept in that if you're about to do something "bad" (probably defined by your culture) and know you can't get caught you'll think "but what if there is a god and judgment and all that," which leads overall to more socially adaptive behavior which 9 times out of 10 is probably in your best long-term interest. Thats about the extent of the god concepts usefulness though.